Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b14
(800 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g49510.1 68418.m06127 VHL binding protein, putative / prefold... 135 4e-32
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 43 3e-04
At5g62250.1 68418.m07816 microtubule associated protein (MAP65/A... 34 0.096
At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP1... 33 0.17
At1g68790.1 68414.m07863 expressed protein 33 0.29
At3g53260.1 68416.m05870 phenylalanine ammonia-lyase 2 (PAL2) ne... 31 1.2
At2g37040.1 68415.m04544 phenylalanine ammonia-lyase 1 (PAL1) ne... 30 2.1
At5g06060.1 68418.m00671 tropinone reductase, putative / tropine... 29 2.7
At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 29 2.7
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 29 2.7
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 29 2.7
At1g61290.1 68414.m06908 syntaxin, putative (SYP124) similar to ... 29 2.7
At3g53120.1 68416.m05854 expressed protein 29 3.6
At3g10340.1 68416.m01240 phenylalanine ammonia-lyase, putative s... 29 3.6
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 29 4.7
At2g29330.1 68415.m03562 tropinone reductase, putative / tropine... 28 6.3
At5g53980.1 68418.m06715 homeobox-leucine zipper family protein ... 28 8.3
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 28 8.3
At1g10950.1 68414.m01257 endomembrane protein 70, putative 28 8.3
>At5g49510.1 68418.m06127 VHL binding protein, putative / prefoldin,
putative similar to Swiss-Prot:Q15765 prefoldin subunit
3 (Von Hippel-Lindau binding protein 1; VHL binding
protein-1; VBP-1; HIBBJ46) [Mus musculus]
Length = 195
Score = 135 bits (326), Expect = 4e-32
Identities = 71/168 (42%), Positives = 108/168 (64%), Gaps = 5/168 (2%)
Frame = +2
Query: 182 GIPEAEFVDNVDEFMKSPINAEGVDV--VLKSLDEKHRKYKVMEYTLATKRRRLRQQIPD 355
GIP A+F+ +V+ ++ G+D L E+ ++YKV+E L ++R L+ +IPD
Sbjct: 18 GIPAAKFIQDVETYLSQ----SGLDPNSALAFHQERLQQYKVVEMKLLAQQRDLQAKIPD 73
Query: 356 LARTIEVIEKLKEQK---EEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDA 526
+ + +EV+ L+ +K E + F +S+ ++ +A + T SVCLWLGANVMLEYS E+A
Sbjct: 74 IEKCLEVVATLEAKKGTGEALLADFEVSEGIYSRACIEDTDSVCLWLGANVMLEYSCEEA 133
Query: 527 EKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKRQ 670
LL N+E A+ +L + DL FLRDQ T T+V +ARVYNWDV +R+
Sbjct: 134 SALLKNNLENAKASLEVLVADLQFLRDQVTVTQVTIARVYNWDVHQRR 181
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/152 (23%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Frame = +2
Query: 131 IKMEGDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEY 310
I +G G+E K +G+ + + ++ MK + G + +K LDEK++K++ E
Sbjct: 139 ISQKGGGIEELE-KEVAGLRTVK--EENEKRMKELESKLGA-LEVKELDEKNKKFRAEE- 193
Query: 311 TLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLG 490
+ K +++ DL I+ +E K + E Q +++++ V+ ++ ++ + L
Sbjct: 194 EMREKIDNKEKEVHDLKEKIKSLES-DVAKGKTELQKWITEKMVVEDSLKDSEKKVVALE 252
Query: 491 ANVM-LEYSLEDAEKLLTTNMETAQENLNQVE 583
+ ++ L+ L+DAEK++ +E LN +E
Sbjct: 253 SEIVELQKQLDDAEKMINGLKNVVEEPLNGIE 284
>At5g62250.1 68418.m07816 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 549
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 215 DEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIE 373
DE S +A+ D+ L+ L+E HR+ YTL ++R +QI D RT+E
Sbjct: 145 DETCSSDFSADESDLSLRKLEELHREL----YTLQEQKRNRVKQIQDNIRTLE 193
>At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 964
Score = 33.5 bits (73), Expect = 0.17
Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Frame = +2
Query: 212 VDEFMKSPINAEGVDVVLKSLDEKHRKYKV--MEYTLATKRRRLRQQIPDLARTIEVIEK 385
+D ++ I E + LK+ +K K ++ +E L+T +++ ++ + ++ K
Sbjct: 493 LDGIDRAVIKLEMEKLSLKNDTDKASKERLQKIENDLSTLKQKQKELNVQWEKEKSLMTK 552
Query: 386 LKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQE 565
++ KEE++ L + + ++ ++ L G + L+ LE+AEK LT + Q
Sbjct: 553 IRSFKEEIDRVNLEIESAEREYDL--NRAAELKYGTLLSLQRQLEEAEKNLTNFRQFGQS 610
Query: 566 NLNQVEHDLD 595
L +V DLD
Sbjct: 611 LLREVVTDLD 620
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 245 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQ 418
EGV K LD + + K E L + ++L + L E + KLK++ EE+ T+
Sbjct: 415 EGVKKKEKDLDARLKTVKEKEKALKAEEKKLHMENERLLEDKECLRKLKDEIEEIGTE 472
>At3g53260.1 68416.m05870 phenylalanine ammonia-lyase 2 (PAL2)
nearly identical to SP|P45724
Length = 717
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 246 SALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCEVYIQFLEN 97
S L+ DF N+ S +AS P D GF+G+ ++ YC +Q+L N
Sbjct: 429 SELVNDFYNNGLPSNLTASSNPSLDYGFKGA--EIAMASYCS-ELQYLAN 475
>At2g37040.1 68415.m04544 phenylalanine ammonia-lyase 1 (PAL1)
nearly identical to SP|P35510
Length = 725
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 246 SALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCEVYIQFLEN 97
S L+ DF N+ S +AS P D GF+G+ ++ YC +Q+L N
Sbjct: 437 SELVNDFYNNGLPSNLTASRNPSLDYGFKGA--EIAMASYCS-ELQYLAN 483
>At5g06060.1 68418.m00671 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 264
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Frame = +2
Query: 485 LGANVM---LEYSLEDAEKLLTTNMETAQENLNQVEHDL 592
+G NV +EYS E+ K+++TN+E+A +L+Q+ H L
Sbjct: 97 VGTNVRKPTVEYSSEEYAKIMSTNLESA-FHLSQIAHPL 134
>At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3
domain-containing protein similar to eukaryotic protein
synthesis initiation factor [Homo sapiens] GI:3941724;
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 1544
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 518 EDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMAR 640
EDA + T +ETA ++N D + D C TE +R
Sbjct: 699 EDAADVSTPKLETADNSVNAKRGSSDEVSDNCINTEKKYSR 739
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 215 DEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLART--IEVIEKL 388
D+F + P++ +++ K E + + L + R + L R V+EK+
Sbjct: 197 DDFDELPVSTASMNMTKKERREYLDQLRAENQRLLRETRDAAFEAAPLVRKPISSVLEKI 256
Query: 389 KEQKEEVETQFL 424
+ +KEE+ QFL
Sbjct: 257 RRRKEEISKQFL 268
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +2
Query: 197 EFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEV 376
E DN++E M+ +E + D+K + V ++ A L Q+I DL IE+
Sbjct: 424 EGADNIEESMRRSCRSETDE---DDHDQKALEDLVKKHVDAKDTHILEQKITDLYNEIEI 480
Query: 377 IEKLKEQKEEVETQFLLSDQVFVKAN 454
++ K++ E Q L ++ + N
Sbjct: 481 YKRDKDELEIQMEQLALDYEILKQQN 506
>At1g61290.1 68414.m06908 syntaxin, putative (SYP124) similar to
syntaxin-related protein Nt-syr1 GI:4206787 from
[Nicotiana tabacum]
Length = 303
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 239 NAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVE 412
N +GV+ + KSL + + + K + K R + D+A+ ++ ++ +K++ E +E
Sbjct: 46 NMKGVETLYKSLQDSNEECKTVHNAKKVKELRAKMD-GDVAQVLKRVKMIKQKLEALE 102
>At3g53120.1 68416.m05854 expressed protein
Length = 217
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Frame = +2
Query: 362 RTIEVIEKLKEQKEEVETQFLLS-DQVFVKANVPPT-KSVCLWLGA-NVMLEYSLEDAEK 532
++++ + KL K+ + QFLLS DQV V+ N+ + L L N+ E + +
Sbjct: 65 KSVDELRKLLSDKDAYQ-QFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQIMELRN 123
Query: 533 ----LLTTNMETAQENLNQVE 583
+ TT + TAQE LN++E
Sbjct: 124 QCRIIRTTELATAQEKLNELE 144
>At3g10340.1 68416.m01240 phenylalanine ammonia-lyase, putative
similar to phenylalanine ammonia-lyase GB:S48726
[Petroselinum crispum]
Length = 707
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 246 SALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCEVYIQFLEN 97
S L+ DF N+ S S P D GF+G+ ++ YC +QFL N
Sbjct: 419 SELVNDFYNNGLPSNLSGGRNPSLDYGFKGA--EIAMASYCS-ELQFLAN 465
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 149 GVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDE 280
G EP ++ +P +EF+ V+ + +GV V+ K D+
Sbjct: 165 GSEPRIQTTFVSVPYSEFLSKVNSNQVQKVEVDGVQVLFKLRDD 208
>At2g29330.1 68415.m03562 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 260
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 503 LEYSLEDAEKLLTTNMETAQENLNQVEHDL 592
+EY ED L++TN+E+A +L+Q+ H L
Sbjct: 104 IEYEAEDFSFLISTNLESAY-HLSQLSHPL 132
>At5g53980.1 68418.m06715 homeobox-leucine zipper family protein
contains Pfam PF00046: Homeobox domain; similar to
homeobox protein PpHB5 (GI:7415622) [Physcomitrella
patens]
Length = 156
Score = 27.9 bits (59), Expect = 8.3
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = +2
Query: 323 KRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVM 502
K++RL Q D R +E + + K E + + LS+Q+ + P + V +W N
Sbjct: 11 KKKRLTQ---DQVRQLEKCFTMNK-KLEPDLKLQLSNQLGL-----PQRQVAVWF-QNKR 60
Query: 503 LEY---SLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWD 655
+ SLE L + E A + ++EH + FL+D+ +A N D
Sbjct: 61 ARFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQLALFTNQD 114
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 323 KRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQV 439
+RR+LR++ DLA ++ E++ E K E Q L Q+
Sbjct: 539 RRRQLREKEDDLADRLKEEEEVAEAKRSAEEQNLQQQQL 577
>At1g10950.1 68414.m01257 endomembrane protein 70, putative
Length = 589
Score = 27.9 bits (59), Expect = 8.3
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 208 IYKFSFWYSRIRLRVRGFYSVSFHF 134
+Y +S +Y ++ ++ GF+ SF+F
Sbjct: 529 VYLYSIYYYYVKTKMSGFFQTSFYF 553
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,331,574
Number of Sequences: 28952
Number of extensions: 267003
Number of successful extensions: 882
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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