Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b13
         (389 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   4.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   4.3  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +3

Query: 243 IFLFVFEWKCVVKYRAI 293
           I++FV  WKC++ + ++
Sbjct: 298 IYMFVSVWKCLLFFVSV 314


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +3

Query: 243 IFLFVFEWKCVVKYRAI 293
           I++FV  WKC++ + ++
Sbjct: 298 IYMFVSVWKCLLFFVSV 314


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +3

Query: 243 IFLFVFEWKCVVKYRAI 293
           I++FV  WKC++ + ++
Sbjct: 298 IYMFVSVWKCLLFFVSV 314


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +3

Query: 243 IFLFVFEWKCVVKYRAI 293
           I++FV  WKC++ + ++
Sbjct: 298 IYMFVSVWKCLLFFVSV 314


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 218 SCFKRDLGNFSIRV*VE 268
           SC+  D+G+FS+ + +E
Sbjct: 39  SCWSEDMGSFSLPLDLE 55


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 369 WRLLFTKLQII 337
           WR LFT LQ I
Sbjct: 109 WRTLFTNLQYI 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,840
Number of Sequences: 336
Number of extensions: 1625
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)