Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b12
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     41   4e-05
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.3  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 19/50 (38%), Positives = 32/50 (64%)
 Frame = +1

Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
           E+ PSD++  +K  I++  G+ PD+Q+L+   F GK   D  TL+D N++
Sbjct: 16  EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 62



 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 19/50 (38%), Positives = 32/50 (64%)
 Frame = +1

Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
           E+ PSD++  +K  I++  G+ PD+Q+L+   F GK   D  TL+D N++
Sbjct: 92  EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 138



 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 19/50 (38%), Positives = 32/50 (64%)
 Frame = +1

Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
           E+ PSD++  +K  I++  G+ PD+Q+L+   F GK   D  TL+D N++
Sbjct: 168 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 214


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 91   KLSVRWNGKEFEI 129
            KLS  WNG+EF +
Sbjct: 1612 KLSFSWNGQEFNL 1624


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,825
Number of Sequences: 2352
Number of extensions: 11972
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)