Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b06
(576 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical... 31 0.55
At5g21120.1 68418.m02518 ethylene-insensitive3-like2 (EIL2) iden... 29 1.7
At2g27050.1 68415.m03250 ethylene-insensitive3-like1 (EIL1) iden... 29 1.7
At2g15550.1 68415.m01781 hypothetical protein similar to zinc fi... 29 2.2
At3g57740.1 68416.m06432 protein kinase family protein contains ... 28 3.9
At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containi... 28 3.9
At2g37730.1 68415.m04627 fringe-related protein similarity to pr... 28 3.9
At5g10120.1 68418.m01172 ethylene insensitive 3 family protein c... 28 5.1
At4g33400.1 68417.m04747 dem protein-related / defective embryo ... 28 5.1
At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family... 28 5.1
At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family... 27 6.8
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 27 9.0
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 27 9.0
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 27 9.0
At4g03180.1 68417.m00435 expressed protein 27 9.0
At3g09410.3 68416.m01119 pectinacetylesterase family protein sim... 27 9.0
At3g09410.1 68416.m01118 pectinacetylesterase family protein sim... 27 9.0
At3g06910.1 68416.m00820 Ulp1 protease family protein similar to... 27 9.0
At2g46660.1 68415.m05822 cytochrome P450, putative similar to cy... 27 9.0
At1g73730.1 68414.m08537 ethylene-insensitive3-like3 (EIL3) iden... 27 9.0
>At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical to
ethylene-insensitive3 GI:2224933 from [Arabidopsis
thaliana]
Length = 628
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 261 ACMQHTRPPDCRCPQYSGGEMPQLPPGKEGGW 356
A MQH PP R P G P P GKE W
Sbjct: 192 ALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWW 223
>At5g21120.1 68418.m02518 ethylene-insensitive3-like2 (EIL2)
identical to ethylene-insensitive3-like2 (EIL2)
GI:2224929 from [Arabidopsis thaliana]
Length = 518
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 249 AFYQACMQHTRPPDCRCPQYSGGEMPQLPPGKEGGWSR 362
A A H PP R P G P P GKE W +
Sbjct: 191 ALLSALFPHCNPPQRRFPLEKGVTPPWWPTGKEDWWDQ 228
>At2g27050.1 68415.m03250 ethylene-insensitive3-like1 (EIL1)
identical to ethylene-insensitive3-like1 GI:2224927 from
[Arabidopsis thaliana]
Length = 584
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = +3
Query: 189 GGDGETSGLADTPKLSGQEL------AFYQACMQHTRPPDCRCPQYSGGEMPQLPPGKEG 350
GG + + L + QEL + A MQH PP R P G P P G E
Sbjct: 164 GGSNDCNSLVGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGNEE 223
Query: 351 GW 356
W
Sbjct: 224 WW 225
>At2g15550.1 68415.m01781 hypothetical protein similar to zinc
finger protein [Arabidopsis thaliana] GI:976277
Length = 589
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 282 PPDCRCPQYSGGEMPQLPPGKEGGWSRNEIMGPLLDPKLYPVRVAASPETPTSRYDQP 455
PP R P +S GE PP K+ ++ L D L P R +PT ++P
Sbjct: 280 PPSSR-PYHSRGEKSSAPPNKQSSPLLSDSQLTLSDTVLAPSRAKQITSSPTYVRERP 336
>At3g57740.1 68416.m06432 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 357
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 11 DNFLQNHLVILVHFGYYFVIQNRK*TIQNFSVNGQTYKQD 130
DNF +++LVI +F Y ++QNR I+ + N YK D
Sbjct: 57 DNFSESNLVIRFNFMYRGILQNRPVLIKRATWN--YYKSD 94
>At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 551
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -1
Query: 369 SHSDSSRPPSQAAVAASPLQSTAGIGSRAASYAA 268
S SDSS P S ++V++SP S++ + S SY++
Sbjct: 451 SDSDSSSPDSSSSVSSSP-DSSSSVSSSPDSYSS 483
>At2g37730.1 68415.m04627 fringe-related protein similarity to
predicted proteins + similar to hypothetical protein
GB:AAC23643 [Arabidopsis thaliana] + weak similarity to
Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 532
Score = 28.3 bits (60), Expect = 3.9
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -1
Query: 456 WADRSEMLEFQDSQRLARDTVLDLGEDPLSHSD-SSRPPSQAAVAASPLQSTAGIGSRAA 280
W DRS E + R + E PL+ + S+ PP Q + S T GSR+A
Sbjct: 112 WRDRSRYSELWWRPNVTRGFIWLDEEPPLNMTWLSTSPPYQVSADTSRFSYTCWYGSRSA 171
Query: 279 SYAACMLGRTLILDQT 232
A ++ T L T
Sbjct: 172 IRMARIIKETFELGLT 187
>At5g10120.1 68418.m01172 ethylene insensitive 3 family protein
contains Pfam profile: PF04873 ethylene insensitive 3
Length = 471
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 261 ACMQHTRPPDCRCPQYSGGEMPQLPPGKEGGW 356
A MQH PP R P G P P G E W
Sbjct: 169 ALMQHCMPPQRRFPLEKGIAPPWWPTGTELWW 200
>At4g33400.1 68417.m04747 dem protein-related / defective embryo and
meristems protein-related identical to dem GI:2190419
from [Lycopersicon esculentum]
Length = 645
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 423 PETPTSRYDQPNAFLDKLQSKYPMLYSILQNEASPELKQRIDRDRNKTTY 572
P++P+S D A L L+ KYP+ S + S L + I+ + K +
Sbjct: 56 PKSPSSSLDDVEAKLQALKLKYPLTQSAPSTQNSARLFRYINGNTPKAKW 105
>At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family
protein
Length = 635
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = -3
Query: 469 SKNALG*S*RDVGV-----SGLAATRTGYSFGSRRGPIIS-FRLQPPSFPGGSCGISPPE 308
S N LG + GV S L ++ G+ G G + FR PP+F GGS G P
Sbjct: 368 SSNLLGQNPSTTGVGYLPGSPLNSSFPGFGVGYLPGSSSNLFRSNPPNFGGGSIGAGPQH 427
Query: 307 Y 305
+
Sbjct: 428 F 428
>At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1696
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 147 TYRKDYLWPNLPHVGGDGETSGLADTPKLSGQELAFYQACMQHTRPPDCR 296
+Y D+L LP D TSG A+ P G L +Q DC+
Sbjct: 1551 SYSTDHLTTGLPESIMDSATSGEANFPHSGGDTLKTSDTLIQTGYASDCQ 1600
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 279 RPPDCRCPQYSGGEMPQLPPGKEG 350
RPP P SGG P PPG +G
Sbjct: 387 RPPPPAPPPGSGGPKPPPPPGPKG 410
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 279 RPPDCRCPQYSGGEMPQLPPGKEG 350
RPP P SGG P PPG +G
Sbjct: 387 RPPPPAPPPGSGGPKPPPPPGPKG 410
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 377 SSPRSKTVSRASRCES*NSNISLRSAQCIFR*ASIE 484
SSPR+ + SRCES +S+ S RS + S+E
Sbjct: 202 SSPRNDSGDEISRCESFSSSESERSESLLDAHVSVE 237
>At4g03180.1 68417.m00435 expressed protein
Length = 185
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 72 KIENEQFK-ILV*TDKHTNKMDHYLTTYRKDYLWPNLPHVGGDGETSGLAD 221
K EN ++ L+ K K Y++ +RK N+P GETS + D
Sbjct: 43 KSENNRYNPSLIKKQKEFYKNAKYVSKFRKSLKQQNIPDKNETGETSKVGD 93
>At3g09410.3 68416.m01119 pectinacetylesterase family protein
similar to pectinacetylesterase precursor GB:CAA67728
[Vigna radiata]; contains Pfam profile: PF03283
pectinacetylesterase
Length = 427
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 174 NLPHV-GGDGETSGLADTPKLSGQELAFYQACMQHTRPPDCRCPQ 305
N+P V G S D L G E + Q C+ T P C PQ
Sbjct: 243 NVPDVLGNPTMRSFYHDVVNLQGVEKSLDQKCVAKTEPSKCMFPQ 287
>At3g09410.1 68416.m01118 pectinacetylesterase family protein
similar to pectinacetylesterase precursor GB:CAA67728
[Vigna radiata]; contains Pfam profile: PF03283
pectinacetylesterase
Length = 427
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 174 NLPHV-GGDGETSGLADTPKLSGQELAFYQACMQHTRPPDCRCPQ 305
N+P V G S D L G E + Q C+ T P C PQ
Sbjct: 243 NVPDVLGNPTMRSFYHDVVNLQGVEKSLDQKCVAKTEPSKCMFPQ 287
>At3g06910.1 68416.m00820 Ulp1 protease family protein similar to
sentrin/SUMO-specific protease [Homo sapiens]
GI:6906859; contains Pfam profile PF02902: Ulp1 protease
family, C-terminal catalytic domain
Length = 502
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 346 SFPG-GSCGISPPEYCG-HRQSGGLVCCMHAW*NANS*PDSFGVSARPEVSPS 194
+F G GS P + G H++S GL C H+ + +S P + G+ PEV S
Sbjct: 26 NFEGYGSYCFRPMDMDGYHKRSAGLNPCKHSGFSHSSRPMAPGIYRYPEVKSS 78
>At2g46660.1 68415.m05822 cytochrome P450, putative similar to
cytochrome p450 (CYP78A9)(GI:17065344) {Arabidopsis
thaliana}
Length = 530
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 333 PPGKEGGWSRNEIMGPLLDPKLYPVRVAASPETPTSRYDQPNAFLDKLQSK 485
PPG W+R I ++D +L P A +D P+ ++D L+ K
Sbjct: 393 PPGPLLSWARLAITDTIVDGRLVPAGTTAMVNMWAVSHD-PHVWVDPLEFK 442
>At1g73730.1 68414.m08537 ethylene-insensitive3-like3 (EIL3)
identical to ethylene-insensitive3-like3 (EIL3)
GB:AF004215 [Arabidopsis thaliana] (Cell 89 (7),
1133-1144 (1997))
Length = 567
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 267 MQHTRPPDCRCPQYSGGEMPQLPPGKEGGW 356
MQH PP + P G P P G E W
Sbjct: 182 MQHCDPPQRKYPLEKGTPPPWWPTGNEEWW 211
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,324,351
Number of Sequences: 28952
Number of extensions: 334806
Number of successful extensions: 993
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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