Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a18
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 396 VESCHSGFSNSS 431
           V SCH GFS+S+
Sbjct: 135 VSSCHQGFSSST 146


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 545 PGAFKLEHRPLGRCSV 498
           PGA+ ++ R LG C +
Sbjct: 403 PGAYWIQLRGLGECGI 418


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 545 PGAFKLEHRPLGRCSV 498
           PGA+ ++ R LG C +
Sbjct: 403 PGAYWIQLRGLGECGI 418


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 676  MNINFLRLDISSPICNLRYPNARSSSENCV 587
            M+I   R+  + P   LRYPN + ++EN V
Sbjct: 1426 MSIAPNRVSQARPSVQLRYPNGK-ANENFV 1454


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 676  MNINFLRLDISSPICNLRYPNARSSSENCV 587
            M+I   R+  + P   LRYPN + ++EN V
Sbjct: 1426 MSIAPNRVSQARPSVQLRYPNGK-ANENFV 1454


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 123 GLRTGWPCFKPSSLRLWIF 67
           GLR G PCF   ++  ++F
Sbjct: 428 GLRNGDPCFFHDTIPPYLF 446


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 123 GLRTGWPCFKPSSLRLWIF 67
           GLR G PCF   ++  ++F
Sbjct: 428 GLRNGDPCFFHDTIPPYLF 446


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 123 GLRTGWPCFKPSSLRLWIF 67
           GLR G PCF   ++  ++F
Sbjct: 428 GLRNGDPCFFHDTIPPYLF 446


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 123 GLRTGWPCFKPSSLRLWIF 67
           GLR G PCF   ++  ++F
Sbjct: 428 GLRNGDPCFFHDTIPPYLF 446


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,162
Number of Sequences: 336
Number of extensions: 3307
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)