Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12a21
(623 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 122 3e-28
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 106 2e-23
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 83 2e-16
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 79 2e-15
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 79 2e-15
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 72 3e-13
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 60 1e-09
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 47 1e-05
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 45 4e-05
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 45 4e-05
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 41 7e-04
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 40 0.002
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 40 0.002
SB_38537| Best HMM Match : VWA (HMM E-Value=0) 31 1.0
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15) 29 3.1
SB_47019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16) 29 4.1
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12) 28 7.1
SB_47222| Best HMM Match : UQ_con (HMM E-Value=5) 28 7.1
SB_569| Best HMM Match : Big_1 (HMM E-Value=1.1) 27 9.4
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 122 bits (293), Expect = 3e-28
Identities = 58/103 (56%), Positives = 68/103 (66%)
Frame = +1
Query: 274 NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 453
N A KRI REL ++ DPP CSAGP G+DL+ W +TI+GP S Y+GGVFFL IHFP
Sbjct: 92 NQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFP 151
Query: 454 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTIS 582
+DYPFKPPK G +CLDIL+ WSPALTIS
Sbjct: 152 SDYPFKPPK---------------GMVCLDILKDSWSPALTIS 179
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 106 bits (254), Expect = 2e-23
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +1
Query: 274 NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 453
N A KRI REL ++ DPP CSAGP G+DL+ W +TI+GP S Y+GGVFFL IHFP
Sbjct: 132 NQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFP 191
Query: 454 TDYPFKPPK 480
+DYPFKPPK
Sbjct: 192 SDYPFKPPK 200
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = +1
Query: 346 SAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI 501
SAGP G+ L+ W +TI+GP S Y+GGVFFL IHFPTDYPFKPPKV R+
Sbjct: 43 SAGPKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKVGQAIRL 94
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Frame = +1
Query: 391 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL----RAQ 558
++G +PY G+F L I P YPF+PPKV F T IYHPNI+S+G ICLD L +
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGM 61
Query: 559 WSPALTISXSVALNLLTSM 615
W PAL IS SV +L M
Sbjct: 62 WKPALNIS-SVLSTILILM 79
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +1
Query: 367 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 546
++ +WQ I+ P PY G F + I FP +YPFKPPK+ F T+IYHPNI+ G +CL I
Sbjct: 22 NILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPI 80
Query: 547 LRAQ-WSPA 570
+ + W PA
Sbjct: 81 ISPENWKPA 89
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 286 ALKRINRELQDLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 462
A++ + EL+ L +P + P + F W I GP + Y GG F + FP DY
Sbjct: 1125 AVRALQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDY 1184
Query: 463 PFKPPKVAFTTRIYHPNINSNGSICLDIL 549
P+ PP F T+++HPNI +G +C+ IL
Sbjct: 1185 PYSPPTFRFLTKMWHPNIYESGDVCISIL 1213
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 70.9 bits (166), Expect = 8e-13
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 316 DLGRDPPAQCSAGPHG-EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFT 492
+L + P SAG EDL+ W+ ++GP + Y+ G F ++ FP +YP +PP + F
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFI 402
Query: 493 TRIYHPNINSNGSICLDIL 549
+ I+HPN++ NG +C+ IL
Sbjct: 403 SDIWHPNVHKNGEVCISIL 421
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Frame = +1
Query: 355 PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-----IYHPNIN 519
P +D+ A I GP D+PY+GG F+ I P DYP +PP+V T ++PN+
Sbjct: 5 PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLY 64
Query: 520 SNGSICLDIL 549
NG +CL I+
Sbjct: 65 RNGKVCLSII 74
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/55 (56%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +1
Query: 463 PFKPPKVAFTTRIYHPNINSNGSICLDIL----RAQWSPALTISXSVALNLLTSM 615
PF+PPKV F T IYHPNI+S+G ICLD L + W PAL IS SV +L M
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNIS-SVLSTILILM 93
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +1
Query: 247 VESQYNST*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGG 426
+E QYN A+KR+ RE ++L R+ A P ++LF W T+ GP D+ + GG
Sbjct: 1 MEKQYNLR---SPAVKRLMREAKEL-RNATELYHAQPLEDNLFEWHFTVRGPPDTEFAGG 56
Query: 427 VFFLTIHFPTDYPFKPPKVAFTT 495
+ I P +YP KPP + T
Sbjct: 57 RYHGRIILPPEYPMKPPSIMLLT 79
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 400 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 549
P D Y+GG F ++ TDYP P + T+IYHPN++ +C+ +L
Sbjct: 45 PTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCMSLL 93
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDIL 549
P D Y+GG F ++ DYP PP IYHPN++ +GS+CL +L
Sbjct: 45 PTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLSLL 94
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 364 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 495
++LF W T+ GP D+ + GG + I P +YP KPP + T
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Frame = +1
Query: 292 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQA---TIMGPV----DSPYQGGVF-FLTIH 447
KR+ +E QD+ R SA ++LF W TI G D G F L I
Sbjct: 737 KRLMKEFQDVSRKTERIFSAELVDDNLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNIT 796
Query: 448 FPTDYPFKPPKV-AFTTRIYHPNINSNGSICLDILRAQ-WSPALTISXSV 591
FP ++PF PP + RI + G+IC+++L + WS A T+ V
Sbjct: 797 FPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELLTPKGWSSAYTVEAVV 846
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 44.4 bits (100), Expect = 8e-05
Identities = 32/101 (31%), Positives = 45/101 (44%)
Frame = +1
Query: 277 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 456
S +K++ RE+ L DPP + ED+ QA+I GP FFLT
Sbjct: 103 SPQIIKQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGPR--------FFLT----- 149
Query: 457 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTI 579
+I+HPN+ NG IC++ L+ W P L I
Sbjct: 150 -------------KIFHPNVAKNGEICVNTLKKDWKPDLGI 177
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 397 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVA-FTTRI 501
GPV +PY+GGV+ + + P YPFK P +A FT I
Sbjct: 56 GPVGTPYEGGVWKVRVDLPEKYPFKSPSIANFTIEI 91
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +1
Query: 382 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 495
+A + GPVD+PY G F I FP YP PP V T
Sbjct: 9 RALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 391 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPK 480
I GP ++P++GG + L I P YPF PPK
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 379 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI---YHPNINSNGSICL 540
++ I GP +PY G+F I P +YP PP + + +PN+ +G +C+
Sbjct: 636 FRVMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCI 692
>SB_38537| Best HMM Match : VWA (HMM E-Value=0)
Length = 1174
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 7 CCSPFAEKCLISINSCFVPIIISFVL 84
C A+KC+ + +CFVPI ++F++
Sbjct: 507 CLRGCAKKCVPKVKTCFVPIDVAFIM 532
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 415 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNG 528
++ ++ L I +YP KPP V F ++I +NS G
Sbjct: 3 FENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 415 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNG 528
++ ++ L I +YP KPP V F ++I +NS G
Sbjct: 3 FENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 460 YPFKPPKVAFTTRIYHPNINSNG 528
+P P V FT+ ++HP I+ NG
Sbjct: 118 FPDSRPLVKFTSNVFHPQIHENG 140
>SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15)
Length = 140
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 435 EENSSLIRTVNWAHNCGLPMEQIFTV-WACRTLCW 334
E +S +R V WA N GLP I + CR + W
Sbjct: 35 EAHSDWVRDVAWAPNVGLPTSTIASCSQDCRVIIW 69
>SB_47019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 301 NRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSP--YQGGVFFLTIHFPTDYPFKP 474
++E++++ + PP G G + W + +DS + G+ + TD F+
Sbjct: 89 DKEIENIRKPPPPLVPLGRQGTECKTWLRMQLHDIDSDVRMRSGLRMKGTYNDTDIDFEE 148
Query: 475 PKVAFTTRIY 504
A TTR+Y
Sbjct: 149 ISKAETTRLY 158
>SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16)
Length = 980
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 364 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 465
E+ F W + ++ VDS + GGV+ L + P P
Sbjct: 186 EESFQWMSHVLPAVDSIHSGGVYCLCLVPPGGLP 219
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 413 GLSTGPIIVACQWNRSS-PCGPAEHCAGGSLPRSCNS 306
GL + A WN S C P A GSL +CNS
Sbjct: 803 GLRCDQCVSAYYWNPSGYGCSPCNCDASGSLATNCNS 839
>SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12)
Length = 186
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 329 IHQHNVRQAHTVKICSIGKPQLWAQLTVLIKE 424
+H+ N + +++C QLW L VLIK+
Sbjct: 56 LHRENYHDSERIQVCKGRIIQLWELLLVLIKQ 87
>SB_47222| Best HMM Match : UQ_con (HMM E-Value=5)
Length = 46
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 590 LLSICSLLCDP 622
LLSICSLLCDP
Sbjct: 2 LLSICSLLCDP 12
>SB_569| Best HMM Match : Big_1 (HMM E-Value=1.1)
Length = 256
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 521 VMVPSVLTFCVHSGHQRSPYPKVLLSICSLLCDP 622
V + S+L F HSG + P P + LS+ S +P
Sbjct: 220 VTLESILLFWRHSGERHKPEPPLSLSLTSRQKEP 253
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,295,965
Number of Sequences: 59808
Number of extensions: 439042
Number of successful extensions: 943
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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