Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12a17
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   3.8  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   5.0  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   5.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.0  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   5.0  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   5.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.6  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +3

Query: 162 FSIELLNYTMSSLPIVSIIRRETFSSAHRLHSPFLSDEENKKVYGKCNNPNG 317
           +++++LN   + L I++    +TFS  + LH+  LS   NK  Y    + NG
Sbjct: 392 YTLQILNLRHNQLEIIAA---DTFSPMNNLHTLLLS--HNKLKYLDAYSLNG 438


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +3

Query: 567 KILETEKNHVVYRGGNTYSR--KKPDSS 644
           K LE +++  VYRG N Y++  KK DS+
Sbjct: 121 KELEGKEDDKVYRGLNNYTQFFKKKDSA 148


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +3

Query: 567 KILETEKNHVVYRGGNTYSR--KKPDSS 644
           K LE +++  VYRG N Y++  KK DS+
Sbjct: 121 KELEGKEDDKVYRGLNNYTQFFKKKDSA 148


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -1

Query: 568 LTSCSNCGFSIIL*SWSQTYIATFSVVLAIVLKYGTSLSKFLWSSGSRMAVFMY 407
           L SC + G   +   W + Y   +SV L  +    T ++ F WS   RMA+  Y
Sbjct: 79  LASCDSSGIIFV---WIK-YEGRWSVEL--INDRNTPVTHFSWSHDGRMALICY 126


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 665 RNMTSVTRGVRLFPRVCITTTVHNMIFFSF*DLNLMQ*LWFF 540
           R   S T  +R +   C+ TT+H + +     L L +  +FF
Sbjct: 27  RERVSFTENLREY---CLNTTIHGLKYIGTVSLTLCERAYFF 65


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 665 RNMTSVTRGVRLFPRVCITTTVHNMIFFSF*DLNLMQ*LWFF 540
           R   S T  +R +   C+ TT+H + +     L L +  +FF
Sbjct: 27  RERVSFTENLREY---CLNTTIHGLKYIGTVSLTLCERAYFF 65


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 482 GKYYRKCRNICLGPTSKNNG 541
           G  +++C++ C GP   N G
Sbjct: 520 GDCHQECKDFCYGPNEDNCG 539


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,705
Number of Sequences: 2352
Number of extensions: 13617
Number of successful extensions: 106
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)