Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12a10
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   0.58 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   0.58 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   0.58 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   9.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.5  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 201 GNERKRKYAEFYRTYDAEKEF 263
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 201 GNERKRKYAEFYRTYDAEKEF 263
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 201 GNERKRKYAEFYRTYDAEKEF 263
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 146  NVTFDDGVEETSHLRLARCRYCTF 75
            N   D+G  E S  +L +C  CT+
Sbjct: 1069 NAQDDEGGLEFSVNKLFKCMICTY 1092


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 146  NVTFDDGVEETSHLRLARCRYCTF 75
            N   D+G  E S  +L +C  CT+
Sbjct: 1069 NAQDDEGGLEFSVNKLFKCMICTY 1092


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 158  QSNNNVTFDDGVEETSHLRLARCRYCT 78
            QS      D+G  E S   L +C  CT
Sbjct: 1097 QSGGTSDDDEGSIEISLAGLFKCMLCT 1123


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 158  QSNNNVTFDDGVEETSHLRLARCRYCT 78
            QS      D+G  E S   L +C  CT
Sbjct: 1097 QSGGTSDDDEGSIEISLAGLFKCMLCT 1123


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 158  QSNNNVTFDDGVEETSHLRLARCRYCT 78
            QS      D+G  E S   L +C  CT
Sbjct: 1097 QSGGTSDDDEGSIEISLAGLFKCMLCT 1123


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 158  QSNNNVTFDDGVEETSHLRLARCRYCT 78
            QS      D+G  E S   L +C  CT
Sbjct: 1097 QSGGTSDDDEGSIEISLAGLFKCMLCT 1123


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 3   SDDCDPLCN*AFLISVKL 56
           +DD + LC+  FL+  KL
Sbjct: 268 NDDYNRLCHLCFLLDEKL 285


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 210 RKRKYAEFYRTYDAEKEF 263
           +KRK    ++T + EKEF
Sbjct: 245 KKRKPYSKFQTLELEKEF 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,979
Number of Sequences: 336
Number of extensions: 1274
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)