Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12a05
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.67 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.67 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.2  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    24   1.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.7  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = -1

Query: 501 IIVTVASISPYFAVNCPSPFIGNMRSCPDNL*LPFILSSGIYSLATTRRCTEFTWTSLIR 322
           I+V   +IS  + ++C S  +    S    L +PF+L  G + L  +     F W S + 
Sbjct: 534 ILVANVAISFGYLISCVSRSVSMALSIGPPLVIPFLLFGGFF-LNVSSIPIYFKWLSFLS 592

Query: 321 IF 316
            F
Sbjct: 593 WF 594


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = -1

Query: 501 IIVTVASISPYFAVNCPSPFIGNMRSCPDNL*LPFILSSGIYSLATTRRCTEFTWTSLIR 322
           I+V   +IS  + ++C S  +    S    L +PF+L  G + L  +     F W S + 
Sbjct: 534 ILVANVAISFGYLISCVSRSVSMALSIGPPLVIPFLLFGGFF-LNVSSIPIYFKWLSFLS 592

Query: 321 IF 316
            F
Sbjct: 593 WF 594


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 288 YDEVTVMGPVDCWIE 244
           Y+E  V G + CWIE
Sbjct: 161 YEEKIVKGKLQCWIE 175


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 247 YPAVNWSHHGYFV 285
           YP + W H GYF+
Sbjct: 73  YPVLVWIHGGYFI 85


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 143 KCLKDALNEYIPKLATGLP 199
           K  +D LN YI +LAT +P
Sbjct: 38  KMRRDKLNSYIGELATLVP 56



 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 312 GPRTVTSEYDEVTVMG 265
           GPRT ++ Y+ V +MG
Sbjct: 186 GPRTESAVYEPVRIMG 201


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 400 GQLQVIWTAPHVANEWRRTVYCKIWRY 480
           G+L V W A       R T Y  +W +
Sbjct: 654 GKLPVRWMALESLTHQRYTTYSDVWSF 680


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,853
Number of Sequences: 336
Number of extensions: 3359
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)