Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p22
(775 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 346 9e-96
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 346 1e-95
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 342 1e-94
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 106 2e-23
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 105 3e-23
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 101 7e-22
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 99 2e-21
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 94 1e-19
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 93 2e-19
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 93 2e-19
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 89 3e-18
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 88 5e-18
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 87 1e-17
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 87 1e-17
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 86 3e-17
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 81 6e-16
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 80 1e-15
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 80 1e-15
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 80 2e-15
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 79 3e-15
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 78 7e-15
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 78 7e-15
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 78 7e-15
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 78 7e-15
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 78 7e-15
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 77 1e-14
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 77 2e-14
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 77 2e-14
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 77 2e-14
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 77 2e-14
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 75 4e-14
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 75 4e-14
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 75 4e-14
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 75 5e-14
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 74 9e-14
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 74 1e-13
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 73 2e-13
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 72 4e-13
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 72 4e-13
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 72 4e-13
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 72 5e-13
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 72 5e-13
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 71 9e-13
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 71 1e-12
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 69 3e-12
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 68 8e-12
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 67 1e-11
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 66 3e-11
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 66 3e-11
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 65 6e-11
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 64 1e-10
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 64 1e-10
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 63 2e-10
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 63 2e-10
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 63 2e-10
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 62 3e-10
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 62 5e-10
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 62 5e-10
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 62 5e-10
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 62 5e-10
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 62 5e-10
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 61 9e-10
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 61 9e-10
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 61 9e-10
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 60 2e-09
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 60 2e-09
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 60 2e-09
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 60 2e-09
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 59 3e-09
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 59 3e-09
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 58 5e-09
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 58 5e-09
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 58 6e-09
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 57 1e-08
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 57 1e-08
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 56 3e-08
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 56 3e-08
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 56 3e-08
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 55 5e-08
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 55 6e-08
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 55 6e-08
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 55 6e-08
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 55 6e-08
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 55 6e-08
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 55 6e-08
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 54 8e-08
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 54 8e-08
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 54 8e-08
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 54 1e-07
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 54 1e-07
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 54 1e-07
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 54 1e-07
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 54 1e-07
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 53 2e-07
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 53 2e-07
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 53 2e-07
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 53 2e-07
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 53 2e-07
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 53 2e-07
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 53 2e-07
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 53 2e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 52 3e-07
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 52 3e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 52 3e-07
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 52 3e-07
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 52 3e-07
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 52 3e-07
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 52 6e-07
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 52 6e-07
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 52 6e-07
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 51 7e-07
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 51 1e-06
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 51 1e-06
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 51 1e-06
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 51 1e-06
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 51 1e-06
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 50 2e-06
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 49 3e-06
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 49 3e-06
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 49 4e-06
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 49 4e-06
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 49 4e-06
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 48 5e-06
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 48 5e-06
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 48 7e-06
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 48 7e-06
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 48 7e-06
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 48 9e-06
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 48 9e-06
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 48 9e-06
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 48 9e-06
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 47 1e-05
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 47 1e-05
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 47 2e-05
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 46 2e-05
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 46 2e-05
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 46 3e-05
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 46 3e-05
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 46 4e-05
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 46 4e-05
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 46 4e-05
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 45 5e-05
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 45 5e-05
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 45 6e-05
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 45 6e-05
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 45 6e-05
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 45 6e-05
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 44 1e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 44 1e-04
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 44 1e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 44 1e-04
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 44 1e-04
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 44 1e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 43 2e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 43 3e-04
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 43 3e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 43 3e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 43 3e-04
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 43 3e-04
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 43 3e-04
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 42 3e-04
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 42 5e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 42 5e-04
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 42 5e-04
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 42 5e-04
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 42 6e-04
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 41 8e-04
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 41 0.001
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 41 0.001
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 41 0.001
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 41 0.001
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 40 0.001
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 40 0.002
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 40 0.002
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 40 0.002
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 40 0.002
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 40 0.002
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 40 0.002
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 39 0.003
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 39 0.003
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 39 0.004
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 39 0.004
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 39 0.004
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 38 0.006
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 38 0.006
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 38 0.007
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 38 0.007
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 38 0.007
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 38 0.007
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 37 0.013
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 37 0.013
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 36 0.023
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 36 0.023
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 36 0.023
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 36 0.030
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 36 0.030
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 36 0.030
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 36 0.039
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 36 0.039
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 35 0.052
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 35 0.052
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 35 0.069
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 35 0.069
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 35 0.069
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 35 0.069
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 34 0.091
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.091
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.091
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 33 0.16
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 33 0.16
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 33 0.21
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.21
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.21
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 33 0.21
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.28
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.28
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 33 0.28
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 32 0.37
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 0.49
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 32 0.49
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 0.64
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.85
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 0.85
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 0.85
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 0.85
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.5
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 30 1.5
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 2.0
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 30 2.0
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 30 2.0
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 29 2.6
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 2.6
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 29 2.6
At5g13850.1 68418.m01619 nascent polypeptide-associated complex ... 29 3.4
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 29 3.4
At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40... 29 4.5
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 29 4.5
At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR ... 29 4.5
At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 29 4.5
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 6.0
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 28 6.0
At4g10480.1 68417.m01720 nascent polypeptide associated complex ... 28 6.0
At1g33040.1 68414.m04068 nascent polypeptide-associated complex ... 28 6.0
At5g59120.1 68418.m07409 subtilase family protein contains simil... 28 7.9
At5g01290.1 68418.m00039 mRNA capping enzyme family protein simi... 28 7.9
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 28 7.9
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 346 bits (851), Expect = 9e-96
Identities = 158/238 (66%), Positives = 191/238 (80%), Gaps = 2/238 (0%)
Frame = +2
Query: 62 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 241
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQI
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 422 VSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
VS SRD+TIKLWNTL ECKYTI + +GH DWVSCVRFSPN P IVS WD+TVKVW+
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDII 769
L+NCKL+ GH+GY++TV VSPDGSLCASGGKD +LWDL +GK L++L+ N +I
Sbjct: 181 LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVI 238
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 346 bits (850), Expect = 1e-95
Identities = 159/237 (67%), Positives = 190/237 (80%), Gaps = 1/237 (0%)
Frame = +2
Query: 62 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 241
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQI
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 422 VSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
VS SRD+TIKLWNTL ECKYTI + DGH +WVSCVRFSPN P IVS WD+TVKVW+L
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 599 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDII 769
NCKL+ + +GHSGYLNTV VSPDGSLCASGGKD +LWDL +GK L++L+ II
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSII 237
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 342 bits (841), Expect = 1e-94
Identities = 157/237 (66%), Positives = 188/237 (79%), Gaps = 1/237 (0%)
Frame = +2
Query: 62 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 241
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQI
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 422 VSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
VS SRD+TIKLWNTL ECKYTI + DGH +WVSCVRFSPN P IVS WD+TVKVW+L
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 599 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDII 769
NCKL+ GHSGYLNTV VSPDGSLCASGGKD +LWDL +GK L++L+ II
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSII 237
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 106 bits (254), Expect = 2e-23
Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 2/222 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
SSD + +S S DKTL+LWD+ G + HT V F+ + IVSGS D+T+
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 449 KLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKIN 622
++W+ T +C + HSD V+ V F N +IVS +D ++W T +K
Sbjct: 138 RIWDVTTGKCLKVL--PAHSDPVTAVDF--NRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 748
+ ++ V SP+G G D LW+++ K L T
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKT 235
Score = 96.3 bits (229), Expect = 2e-20
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Frame = +2
Query: 221 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-----GKTTRRFEDHTKDV 385
+ + L H+ +S V SSDG S S DKT+R + + + + F H +
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 386 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVS 562
VAFS D R IVS S DKT+KLW+ E I+ GH+++ CV F+P + +IVS
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDV--ETGSLIKTLIGHTNYAFCVNFNPQ--SNMIVS 130
Query: 563 CGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 742
+D TV++W +T K HS + V + DGSL S D +WD G +
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 743 HTL 751
TL
Sbjct: 191 KTL 193
Score = 95.1 bits (226), Expect = 5e-20
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 2/219 (0%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
ET L TL GH + + NP+ +MI+S S D+T+ +W +T G K L H
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVTT-----GKCLKVLPAH 154
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIV 424
S ++ V + DG+ +S S+D R+WD G + +D V V FS + + I+
Sbjct: 155 SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFIL 214
Query: 425 SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN-PIIVSCGWDRTVKVWHLT 601
G+ D T++LWN ++ K+ GH + C+ + + N IVS D V +W L
Sbjct: 215 VGTLDNTLRLWN-ISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELN 273
Query: 602 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
+ KL GH+ + V P +L ASG D +W
Sbjct: 274 SKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 74.5 bits (175), Expect = 7e-14
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Frame = +2
Query: 371 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAE-CKYTIQD-DGHSDWVSCVRFSPN 538
H + V SV FS D R + S S DKTI+ + NT+ + +Q+ GH + +S V FS +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 539 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
IVS D+T+K+W + L +GH+ Y V +P ++ SG D +W
Sbjct: 83 AR--FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIW 140
Query: 719 DLNDGKHLHTLD-HNDIIT 772
D+ GK L L H+D +T
Sbjct: 141 DVTTGKCLKVLPAHSDPVT 159
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH---SHFISDVVLSSDGNYALSGSWDKTL 322
IL + D TL +W ++ + K GH + IS ++G +SGS D +
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-----LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 323 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
+W+L + K ++ E HT+ V++VA I SGS DKT+++W E
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 105 bits (252), Expect = 3e-23
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
K L GH+ IS V S+DGN S S DKT+ LW R+E H+ + +A+S D
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 410 NRQIVSGSRDKTIKLWNTLA--ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 583
+ S S D T+++W+ + EC ++ GH+++V CV F+P + +IVS +D T+
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLR--GHTNFVFCVNFNP--PSNLIVSGSFDETI 152
Query: 584 KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
++W + K HS +++V + DGSL S D +WD +G L TL
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Score = 96.3 bits (229), Expect = 2e-20
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 277
GH+ ++ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 278 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 457
N +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS S D + K+W
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 458 NTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 634
+ C T+ DD S VS +FSPN I+ D T+K+ + K + GH
Sbjct: 198 DAKEGTCLKTLIDD-KSPAVSFAKFSPN--GKFILVATLDSTLKLSNYATGKFLKVYTGH 254
Query: 635 SGYLNTVTVS---PDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDII 769
+ + +T + +G SG +D LWDL L L+ H D +
Sbjct: 255 TNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAV 303
Score = 88.6 bits (210), Expect = 4e-18
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
SSD +Y S S D TLR+WD + + + HT V V F+ + IVSGS D+T
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDET 151
Query: 446 IKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
I++W +C I+ HS +S V F N +IVS D + K+W
Sbjct: 152 IRIWEVKTGKCVRMIK--AHSMPISSVHF--NRDGSLIVSASHDGSCKIW 197
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +2
Query: 278 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSR-DKTIK 451
++G Y +SGS D + LWDL A +R E HT V+SV+ V N SG+ DKTI+
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIR 327
Query: 452 LW 457
+W
Sbjct: 328 IW 329
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 101 bits (241), Expect = 7e-22
Identities = 69/212 (32%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L GH V + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTI 448
+SDG+ +S S DKT+R WD+ GK ++ +H+ V S + I+SGS D T
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTA 163
Query: 449 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 628
KLW+ + IQ ++ V FS A I + G D VKVW L + +
Sbjct: 164 KLWD--MRQRGAIQTFPDKYQITAVSFS--DAADKIFTGGVDNDVKVWDLRKGEATMTLE 219
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
GH + +++SPDGS + G D K +WD+
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 68.1 bits (159), Expect = 6e-12
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L+GH + + I+S+S DKT+ W + G K++ HS F++
Sbjct: 92 LKGHKNAILDLHWTSD-GSQIVSASPDKTVRAWDVET-----GKQIKKMAEHSSFVNSCC 145
Query: 272 LSSDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
+ G +SGS D T +LWD+ + F D + + +V+FS +I +G D +
Sbjct: 146 PTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDV 204
Query: 449 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL------TNCK 610
K+W+ L + + T+ +GH D ++ + SP+ + +++ G D + VW + C
Sbjct: 205 KVWD-LRKGEATMTLEGHQDTITGMSLSPDGS--YLLTNGMDNKLCVWDMRPYAPQNRCV 261
Query: 611 LKINHLGHSGYLNTVTVS--PDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
H+ N + S PDG+ +G D +WD + ++ L
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKL 310
Score = 67.3 bits (157), Expect = 1e-11
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 400
P L GH + + + G SGS D+ + LW + K + H +L + +
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHW 104
Query: 401 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWV-SCVRFSPNHANPIIVSCGWDR 577
+ D QIVS S DKT++ W+ + K + HS +V SC P+I+S D
Sbjct: 105 TSDGSQIVSASPDKTVRAWD-VETGKQIKKMAEHSSFVNSCC--PTRRGPPLIISGSDDG 161
Query: 578 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD- 754
T K+W + + I + V+ S +GG D +WDL G+ TL+
Sbjct: 162 TAKLWDMRQ-RGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEG 220
Query: 755 HNDIIT 772
H D IT
Sbjct: 221 HQDTIT 226
Score = 60.5 bits (140), Expect = 1e-09
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 5/224 (2%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
ET K + H+ +V + P +I+S S D T +W + + P K
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK----- 180
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
+ I+ V S + +G D +++WDL G+ T E H + ++ S D +++
Sbjct: 181 -YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLT 239
Query: 428 GSRDKTIKLWNTLA-----ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
D + +W+ C + H+ + ++ S + + + DR V +W
Sbjct: 240 NGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIW 299
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
T+ + GH+G +N P + S D L ++
Sbjct: 300 DTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 99 bits (238), Expect = 2e-21
Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Frame = +2
Query: 143 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 322
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 323 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DG 499
RLW+ G+ F H V V++S D+R ++SGS+D T+K+W K QD G
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE--IRTKKLKQDLPG 442
Query: 500 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
H+D V V +SP+ +VS G DR +K+W
Sbjct: 443 HADEVFAVDWSPDGEK--VVSGGKDRVLKLW 471
Score = 81.4 bits (192), Expect = 6e-16
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
GH+ + V S DG SGS D T+RLWDL + H VL+VA+S D + +
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHL 166
Query: 422 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH-ANPI--IVSCGWDRTVKVW 592
VSGS+ I WN GH W++ + + P H ++P V+ D ++W
Sbjct: 167 VSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIW 226
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
+T K I GH+ + V DG + +G +D +W+ GK + L
Sbjct: 227 DITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIREL 278
Score = 81.0 bits (191), Expect = 8e-16
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 3/223 (1%)
Frame = +2
Query: 59 KMSETL--KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK 232
KM ET KL L+GH W+ +A + +Y ++ + + D T + ++ QK
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLALSTEY--VLRTGAFDHTGRQYPPNEEK------QK 316
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVD 409
L ++ D +SGS D T+ LW+ + K + R H + V V FS D
Sbjct: 317 ALERYNKTKGD-----SPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPD 371
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
+ I S S DK+++LWN + T+ GH V V +S + + +++S D T+K+
Sbjct: 372 GKWIASASFDKSVRLWNGITGQFVTVFR-GHVGPVYQVSWSAD--SRLLLSGSKDSTLKI 428
Query: 590 WHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
W + KLK + GH+ + V SPDG SGGKD LW
Sbjct: 429 WEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 66.5 bits (155), Expect = 2e-11
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 1/197 (0%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-SGSWDKTLR 325
+I + S+D T+ +W+ T+ G + L GH H+I+ + LS++ Y L +G++D T R
Sbjct: 254 IIYTGSQDCTIKMWETTQ-----GKLIRELKGHGHWINSLALSTE--YVLRTGAFDHTGR 306
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 505
+ K + E + K ++VSGS D T+ LW + + GH
Sbjct: 307 QYPPNEEKQ-KALERYNKTK-----GDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQ 360
Query: 506 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 685
V+ V FSP+ I S +D++V++W+ + GH G + V+ S D L
Sbjct: 361 QLVNHVYFSPD--GKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLL 418
Query: 686 SGGKDMKAMLWDLNDGK 736
SG KD +W++ K
Sbjct: 419 SGSKDSTLKIWEIRTKK 435
Score = 60.9 bits (141), Expect = 9e-10
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 5/216 (2%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS-- 262
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Query: 263 ---DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 433
V LSS ++ S D R+WD+ K+ HT V V + D I +GS
Sbjct: 201 SWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGS 259
Query: 434 RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 613
+D TIK+W T + K + GH W++ + S + ++ + +D T + + K
Sbjct: 260 QDCTIKMWET-TQGKLIRELKGHGHWINSLALSTEY---VLRTGAFDHTGRQYPPNEEKQ 315
Query: 614 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
K Y T SP+ SG D LW+
Sbjct: 316 K----ALERYNKTKGDSPE--RLVSGSDDFTMFLWE 345
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 93.9 bits (223), Expect = 1e-19
Identities = 56/164 (34%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGE 207
Query: 416 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
SGS D +K+W+ + C +T + GH+ V+ +RF+P+ IVS G D VKVW
Sbjct: 208 FFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNVLRFTPD--GRWIVSGGEDNVVKVW 263
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
LT KL H G + ++ P L A+G D WDL
Sbjct: 264 DLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 307
Score = 72.1 bits (169), Expect = 4e-13
Identities = 43/150 (28%), Positives = 63/150 (42%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 475
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEA 184
Query: 476 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
K GH V F P S D +K+W + + GH+ +N +
Sbjct: 185 KVVRTLTGHRSNCVSVNFHP--FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 242
Query: 656 TVSPDGSLCASGGKDMKAMLWDLNDGKHLH 745
+PDG SGG+D +WDL GK LH
Sbjct: 243 RFTPDGRWIVSGGEDNVVKVWDLTAGKLLH 272
Score = 72.1 bits (169), Expect = 4e-13
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 2/182 (1%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 182 EEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 235
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 236 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLAT 295
Query: 428 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV--WHLT 601
GS DKT+K W+ L + + V C+ F+P+ + V CG ++K+ W
Sbjct: 296 GSADKTVKFWD-LETFELIGSGGTETTGVRCLTFNPDGKS---VLCGLQESLKIFSWEPI 351
Query: 602 NC 607
C
Sbjct: 352 RC 353
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/113 (25%), Positives = 48/113 (42%)
Frame = +2
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
+R +V+G D + LW + + + GHS + V F + ++ + T+K+
Sbjct: 122 SRVLVTGGEDHKVNLW-AIGKPNAILSLYGHSSGIDSVTFDASEG--LVAAGAASGTIKL 178
Query: 590 WHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 748
W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 179 WDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 231
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/84 (28%), Positives = 42/84 (50%)
Frame = +2
Query: 500 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 679
HS V+C++ ++ ++V+ G D V +W + ++ GHS +++VT L
Sbjct: 108 HSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 166
Query: 680 CASGGKDMKAMLWDLNDGKHLHTL 751
A+G LWDL + K + TL
Sbjct: 167 VAAGAASGTIKLWDLEEAKVVRTL 190
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 93.1 bits (221), Expect = 2e-19
Identities = 55/164 (33%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 416 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
SGS D +K+W+ + C +T + GH+ V+ +RF+P+ +VS G D VKVW
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNVLRFTPD--GRWVVSGGEDNIVKVW 170
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
LT KL H G + ++ P L A+G D WDL
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLAT 202
Query: 428 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV--WHLT 601
GS D+T+K W+ L + + V C+ F+P+ V CG ++K+ W
Sbjct: 203 GSADRTVKFWD-LETFELIGSGGPETAGVRCLSFNPDGKT---VLCGLQESLKIFSWEPI 258
Query: 602 NC 607
C
Sbjct: 259 RC 260
Score = 67.3 bits (157), Expect = 1e-11
Identities = 42/149 (28%), Positives = 62/149 (41%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 475
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 476 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
K GH V F P S D +K+W + + GH+ +N +
Sbjct: 92 KIVRTLTGHRSNCISVDFHP--FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 656 TVSPDGSLCASGGKDMKAMLWDLNDGKHL 742
+PDG SGG+D +WDL GK L
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW-DRTVK 586
+R +V+G D + LW + + + GHS + V F A+ ++V+ G T+K
Sbjct: 29 SRVLVTGGEDHKVNLW-AIGKPNAILSLYGHSSGIDSVTFD---ASEVLVAAGAASGTIK 84
Query: 587 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 748
+W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 85 LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +2
Query: 479 YTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
Y +Q+ HS V+C++ ++ ++V+ G D V +W + ++ GHS +++V
Sbjct: 7 YKLQEFVAHSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV 65
Query: 656 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
T L A+G LWDL + K + TL
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTL 97
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 93.1 bits (221), Expect = 2e-19
Identities = 55/164 (33%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 416 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
SGS D +K+W+ + C +T + GH+ V+ +RF+P+ +VS G D VKVW
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNVLRFTPD--GRWVVSGGEDNIVKVW 170
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
LT KL H G + ++ P L A+G D WDL
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLAT 202
Query: 428 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV--WHLT 601
GS D+T+K W+ L + + V C+ F+P+ V CG ++K+ W
Sbjct: 203 GSADRTVKFWD-LETFELIGSGGPETAGVRCLSFNPDGKT---VLCGLQESLKIFSWEPI 258
Query: 602 NC 607
C
Sbjct: 259 RC 260
Score = 67.3 bits (157), Expect = 1e-11
Identities = 42/149 (28%), Positives = 62/149 (41%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 475
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 476 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
K GH V F P S D +K+W + + GH+ +N +
Sbjct: 92 KIVRTLTGHRSNCISVDFHP--FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 656 TVSPDGSLCASGGKDMKAMLWDLNDGKHL 742
+PDG SGG+D +WDL GK L
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW-DRTVK 586
+R +V+G D + LW + + + GHS + V F A+ ++V+ G T+K
Sbjct: 29 SRVLVTGGEDHKVNLW-AIGKPNAILSLYGHSSGIDSVTFD---ASEVLVAAGAASGTIK 84
Query: 587 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 748
+W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 85 LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +2
Query: 479 YTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
Y +Q+ HS V+C++ ++ ++V+ G D V +W + ++ GHS +++V
Sbjct: 7 YKLQEFVAHSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV 65
Query: 656 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
T L A+G LWDL + K + TL
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTL 97
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of Pol
II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 89.0 bits (211), Expect = 3e-18
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 1/218 (0%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L GH+G V +P D +LSSS D T+ +W + N + K GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANL--VCYK---GHNYPVWDAQ 467
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
S G+Y S S D+T R+W + + R H DV + + I +GS DKT++
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVR 524
Query: 452 LWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 628
LW+ EC GH V + SP+ + S D T+ +W L+ + +
Sbjct: 525 LWDVQTGECVRIFI--GHRSMVLSLAMSPD--GRYMASGDEDGTIMMWDLSTARCITPLM 580
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 742
GH+ + +++ S +GSL ASG D LWD+ L
Sbjct: 581 GHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 618
Score = 77.0 bits (181), Expect = 1e-14
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GHS + S G++ LS S D T+RLW ++ H V FS
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
S S D+T ++W+ I GH +S V + PN N I D+TV++W
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIM-AGH---LSDVDWHPN-CNYIATGSS-DKTVRLWD 527
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDII 769
+ + +GH + ++ +SPDG ASG +D M+WDL+ + + L HN +
Sbjct: 528 VQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCV 586
Score = 70.9 bits (166), Expect = 9e-13
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
LR G ++ + +P + I + S DKT+ +W + E + GH + +
Sbjct: 495 LRIMAGHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLA 548
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+S DG Y SG D T+ +WDL+ + H V S+++S + + SGS D T+K
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVK 608
Query: 452 LWNTLAECKYTIQDD--GHSDWVSCVRFSPNHANPI 553
LW+ + K T ++ G+S+ + +R P + P+
Sbjct: 609 LWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPV 644
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
H+G LN ++S DGSL A G D +WD+
Sbjct: 352 HNG-LNCSSISHDGSLVAGGFSDSSIKVWDM 381
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 88.2 bits (209), Expect = 5e-18
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH+ + V +S+ L+G+ ++LWDL K R F H + +V F
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 62
Query: 416 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
+ SGS D +++W+T + C T + GH+ +S + FSP+ +VS G D VKVW
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYK--GHTRGISTIEFSPD--GRWVVSGGLDNVVKVW 118
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
LT KL H G + ++ P L A+G D WDL
Sbjct: 119 DLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 162
Score = 70.5 bits (165), Expect = 1e-12
Identities = 43/125 (34%), Positives = 59/125 (47%)
Frame = +2
Query: 371 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 550
HT V SVAF+ + +++G+ IKLW+ L E K GH S V F P
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP--FGE 62
Query: 551 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
+ S D ++VW + GH+ ++T+ SPDG SGG D +WDL
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Query: 731 GKHLH 745
GK LH
Sbjct: 123 GKLLH 127
Score = 69.7 bits (163), Expect = 2e-12
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
E K+ GH + + +P + + + S S D L VW D G Q GH
Sbjct: 37 EESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKGH 90
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
+ IS + S DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 91 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 150
Query: 428 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV--WHLT 601
GS D+T+K W+ L + + V + F P+ + CG D +KV W
Sbjct: 151 GSADRTVKFWD-LETFELIGTTRPEATGVRAIAFHPDGQT---LFCGLDDGLKVYSWEPV 206
Query: 602 NCK 610
C+
Sbjct: 207 ICR 209
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 87.0 bits (206), Expect = 1e-17
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 14/238 (5%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 277
H ++ +A +P P +LSSS D + +W D + + GHSH++ V +
Sbjct: 98 HADYIRCVAVHPTLP-YVLSSSDDMLIKLW----DWEKGWLCTQIFEGHSHYVMQVTFNP 152
Query: 278 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIK 451
D N S S D+T+++W+L + + H K V V + D +++GS D T K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 452 LWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK--IN 622
+W+ + C T++ GH+ VS V F P PII++ D TV++WH T +L+ +N
Sbjct: 213 VWDYQTKSCVQTLE--GHTHNVSAVSFHPEL--PIIITGSEDGTVRIWHATTYRLENTLN 268
Query: 623 H-------LGH-SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIIT 772
+ +GH G V +GS+ G+++ D N GK + HN+I T
Sbjct: 269 YGLERVWAIGHIKGSRRVVIGYDEGSIMVKLGREIPVASMD-NSGKIIWA-KHNEIHT 324
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/121 (30%), Positives = 64/121 (52%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 277
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ + L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 278 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 457
D Y ++GS D T ++WD + E HT +V +V+F + I++GS D T+++W
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Query: 458 N 460
+
Sbjct: 257 H 257
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 87.0 bits (206), Expect = 1e-17
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH+ + V S L+G+ ++LWD+ K R F H + +V F
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 416 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
+ SGS D +K+W+ + C T + GHS +S +RF+P+ +VS G D VKVW
Sbjct: 114 FLASGSSDANLKIWDIRKKGCIQTYK--GHSRGISTIRFTPD--GRWVVSGGLDNVVKVW 169
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
LT KL H G + ++ P L A+G D WDL
Sbjct: 170 DLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 74.5 bits (175), Expect = 7e-14
Identities = 46/150 (30%), Positives = 67/150 (44%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 475
++G D + LW + + HT V SVAF +++G+ IKLW+ + E
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-VEEA 90
Query: 476 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
K GH S V F P + S D +K+W + + GHS ++T+
Sbjct: 91 KMVRAFTGHRSNCSAVEFHP--FGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTI 148
Query: 656 TVSPDGSLCASGGKDMKAMLWDLNDGKHLH 745
+PDG SGG D +WDL GK LH
Sbjct: 149 RFTPDGRWVVSGGLDNVVKVWDLTAGKLLH 178
Score = 70.5 bits (165), Expect = 1e-12
Identities = 47/175 (26%), Positives = 81/175 (46%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
E K+ GH + + +P + + + S S D L +W + + G Q GH
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GCIQT-YKGH 141
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
S IS + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 142 SRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLAT 201
Query: 428 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
GS D+T+K W+ L + + V ++F P+ + CG D ++KV+
Sbjct: 202 GSADRTVKFWD-LETFELIGSTRPEATGVRSIKFHPDGRT---LFCGLDDSLKVY 252
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +2
Query: 464 LAECKYTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSG 640
+A+ Y +Q+ HS V+C+ + + ++ G D V +W + ++ GH+
Sbjct: 1 MAKRGYKLQEFLAHSANVNCLSIGKKTSR-LFITGGDDYKVNLWAIGKPTSLMSLCGHTS 59
Query: 641 YLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 736
+++V L +G LWD+ + K
Sbjct: 60 AVDSVAFDSAEVLVLAGASSGVIKLWDVEEAK 91
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 85.8 bits (203), Expect = 3e-17
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T GH + ++A +P + ++S DKT +W + N G GHS + +
Sbjct: 334 TFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDI-----NTGAELLLQEGHSRSVYGI 387
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
DG A S D R+WDL G++ F+ H K V SV FS + + SG D
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQC 447
Query: 449 KLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH 625
++W+ + + Y I H++ VS V++ P + + +D V +W + L +
Sbjct: 448 RIWDLRMRKSLYII--PAHANLVSQVKYEPQEGY-FLATASYDMKVNIWSGRDFSLVKSL 504
Query: 626 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
GH + ++ ++ D S A+ D LW
Sbjct: 505 AGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 85.0 bits (201), Expect = 5e-17
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Frame = +2
Query: 185 VWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 364
+W++ + N + L H +DVV S + + S D+T +LW G + F
Sbjct: 281 LWEMPQVTNTIAV----LKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTF 335
Query: 365 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 544
E H + VAF + + + S DKT +LW+ + +Q+ GHS V + F + A
Sbjct: 336 EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGA 394
Query: 545 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
+ SCG D +VW L + + GH + +V SP+G ASGG+D + +WDL
Sbjct: 395 --LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
Query: 725 NDGKHLHTLD-HNDIIT 772
K L+ + H ++++
Sbjct: 453 RMRKSLYIIPAHANLVS 469
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 328
+ S D +W L ++ Y IP H++ +S V +G + + S+D + +
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIP-----AHANLVSQVKYEPQEGYFLATASYDMKVNI 492
Query: 329 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 463
W + H V S+ + D+ I + S D+TIKLW +
Sbjct: 493 WSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 81.4 bits (192), Expect = 6e-16
Identities = 54/220 (24%), Positives = 94/220 (42%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+S+ Y S DK ++ WDL K R + H V +A +++G RD +
Sbjct: 226 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 631
+W+ + + GH + V V P +P +V+ D T+K W L K
Sbjct: 286 VWDIRTKMQ-IFALSGHDNTVCSVFTRP--TDPQVVTGSHDTTIKFWDLRYGKTMSTLTH 342
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
H + +T+ P + AS D + L G+ H +
Sbjct: 343 HKKSVRAMTLHPKENAFASASAD-NTKKFSLPKGEFCHNM 381
Score = 78.6 bits (185), Expect = 4e-15
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
+ GH ++ V + +GS D+T+++WD+A G H + V +A S +
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+ S DK +K W+ L + K GH V C+ P ++++ G D +VW
Sbjct: 232 YMFSAGDDKQVKCWD-LEQNKVIRSYHGHLSGVYCLALHP--TLDVLLTGGRDSVCRVWD 288
Query: 596 LTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 760
+ K++I L GH + +V P +G D WDL GK + TL H+
Sbjct: 289 I-RTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHH 343
Score = 63.3 bits (147), Expect = 2e-10
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Frame = +2
Query: 338 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC-KYTIQDDGHSDWV 514
A K R + H V SVAF N +GS D+TIK+W+ K T+ GH + V
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLT--GHIEQV 221
Query: 515 SCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 694
+ S H + S G D+ VK W L K+ ++ GH + + + P + +GG
Sbjct: 222 RGLAVSNRHT--YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGG 279
Query: 695 KDMKAMLWDLNDGKHLHTLDHND 763
+D +WD+ + L +D
Sbjct: 280 RDSVCRVWDIRTKMQIFALSGHD 302
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L GH+ V + T P P ++ + S D T+ W L YG L H + +
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVV-TGSHDTTIKFWDL-----RYGKTMSTLTHHKKSVRAMT 351
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
L N S S D T + + L G+ K +++ ++ +V+G + +I
Sbjct: 352 LHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIW 410
Query: 452 LWN-----TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
W+ + + + +Q ++ +V+C D+T+K+W
Sbjct: 411 FWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 80.2 bits (189), Expect = 1e-15
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 250
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 251 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 202
Query: 425 SGSRDKTIKLWNTLAECK---YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+GS D T +L++ + Y DG + V+ + FS + + + T VW
Sbjct: 203 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVS-GRLLFAGYASNNTCYVWD 261
Query: 596 L----TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
L + H ++ + +S DGS +G D +W
Sbjct: 262 TLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 306
Score = 51.6 bits (118), Expect = 6e-07
Identities = 55/219 (25%), Positives = 86/219 (39%), Gaps = 15/219 (6%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
I+S+S+D LIVW + + I + + S +G G D ++
Sbjct: 18 IVSASQDGRLIVWNALTSQKTHAIKLPCAW-----VMTCAFSPNGQSVACGGLDSVCSIF 72
Query: 332 DLA--AGK-----TTRRFEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECKYT 484
L+ A K +R H + +S V N +++ S D+T LW+ K +
Sbjct: 73 SLSSTADKDGTVPVSRMLTGH-RGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTS 131
Query: 485 IQ----DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLN 649
+ GH+ V V S ++ N I S D T ++W + GH G +N
Sbjct: 132 VFGGEFQSGHTADVLSVSISGSNPNWFI-SGSCDSTARLWDTRAASRAVRTFHGHEGDVN 190
Query: 650 TVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HND 763
TV PDG +G D L+D+ G L H D
Sbjct: 191 TVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD 229
Score = 48.8 bits (111), Expect = 4e-06
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Frame = +2
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--N 460
N +S S D L +W+ + T + V++ AFS + + + G D ++ +
Sbjct: 16 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLS 75
Query: 461 TLAECKYTIQDD----GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 628
+ A+ T+ GH +VSC ++ PN +I S G D+T +W +T LK +
Sbjct: 76 STADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVTT-GLKTSVF 133
Query: 629 G---HSGY-LNTVTVSPDGS---LCASGGKDMKAMLWD 721
G SG+ + ++VS GS SG D A LWD
Sbjct: 134 GGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWD 171
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Frame = +2
Query: 383 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 562
V S+ ++ + +IVS S+D + +WN L K T WV FSPN + V+
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPNGQS---VA 61
Query: 563 C-GWDRTVKVWHLTNCKLK-----INHL--GHSGYLNTVTVSP--DGSLCASGGKDMKAM 712
C G D ++ L++ K ++ + GH GY++ P D L S G D +
Sbjct: 62 CGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG-DQTCI 120
Query: 713 LWDLNDG 733
LWD+ G
Sbjct: 121 LWDVTTG 127
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 80.2 bits (189), Expect = 1e-15
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 250
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 251 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 264
Query: 425 SGSRDKTIKLWNTLAECK---YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+GS D T +L++ + Y DG + V+ + FS + + + T VW
Sbjct: 265 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVS-GRLLFAGYASNNTCYVWD 323
Query: 596 L----TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
L + H ++ + +S DGS +G D +W
Sbjct: 324 TLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 368
Score = 60.5 bits (140), Expect = 1e-09
Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 15/240 (6%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
TL+GH G V + P+ + I+S+S+D LIVW + + I + +
Sbjct: 60 TLQGHTGKVYSLDWTPER-NRIVSASQDGRLIVWNALTSQKTHAIKLPCAW-----VMTC 113
Query: 269 VLSSDGNYALSGSWDKTLRLWDLA--AGK-----TTRRFEDHTKDVLSVAFSVDNRQ--I 421
S +G G D ++ L+ A K +R H + +S V N +
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGH-RGYVSCCQYVPNEDAHL 172
Query: 422 VSGSRDKTIKLWNTLAECKYTIQ----DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
++ S D+T LW+ K ++ GH+ V V S ++ N I S D T ++
Sbjct: 173 ITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFI-SGSCDSTARL 231
Query: 590 WHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HND 763
W + GH G +NTV PDG +G D L+D+ G L H D
Sbjct: 232 WDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD 291
Score = 53.2 bits (122), Expect = 2e-07
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
+ L GH+ + + + + N +S S D L +W+ + T + V++ AFS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 410 NRQIVSGSRDKTIKLW--NTLAECKYTIQDD----GHSDWVSCVRFSPNHANPIIVSCGW 571
+ + G D ++ ++ A+ T+ GH +VSC ++ PN +I S G
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG- 177
Query: 572 DRTVKVWHLTNCKLKINHLG---HSGY-LNTVTVSPDGS---LCASGGKDMKAMLWD 721
D+T +W +T LK + G SG+ + ++VS GS SG D A LWD
Sbjct: 178 DQTCILWDVTT-GLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWD 233
Score = 48.4 bits (110), Expect = 5e-06
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Frame = +2
Query: 356 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 535
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 536 NHANPIIVSC-GWDRTVKVWHLTNCKLK-----INHL--GHSGYLNTVTVSP--DGSLCA 685
N + V+C G D ++ L++ K ++ + GH GY++ P D L
Sbjct: 118 NGQS---VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLIT 174
Query: 686 SGGKDMKAMLWDLNDG 733
S G D +LWD+ G
Sbjct: 175 SSG-DQTCILWDVTTG 189
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 79.8 bits (188), Expect = 2e-15
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 6/217 (2%)
Frame = +2
Query: 86 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT--RDENNYGIPQKR---LYGHS 250
G GHNG + +A K +S S D+TL VW L +++ I K + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 251 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 430
I+ V ++ + + +GS D+T +W L + H + + SV FS ++ +++
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTA 559
Query: 431 SRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNC 607
S DKT+K+W C T + GH+ V F + VSCG D +K+W++
Sbjct: 560 SGDKTVKIWAISDGSCLKTFE--GHTSSVLRASFITDGTQ--FVSCGADGLLKLWNVNTS 615
Query: 608 KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
+ + H + + V + A+GG D LW
Sbjct: 616 ECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 78.2 bits (184), Expect = 6e-15
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIAT--NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 244
T+ L GH V + T + +I++ S+DKT+ +W T ++ G+ G
Sbjct: 390 TMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVGT----G 444
Query: 245 HSHFISDVVLSSDG-NYALSGSWDKTLRLWDLAAG----------KTTRRFEDHTKDVLS 391
H+ I V + ++ +SGS D+TL++W L KT H KD+ S
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 392 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 571
VA + ++ + +GS D+T +W L + + + GH + V FS + +++
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWR-LPDLVHVVTLKGHKRRIFSVEFST--VDQCVMTASG 561
Query: 572 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
D+TVK+W +++ GH+ + + DG+ S G D LW++N + + T
Sbjct: 562 DKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATY 621
Query: 752 DHND 763
D ++
Sbjct: 622 DQHE 625
Score = 77.8 bits (183), Expect = 7e-15
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Frame = +2
Query: 74 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 253
LK R + H+ + +A + ++ + S D+T +W+L + L GH
Sbjct: 489 LKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIWRLPDL-----VHVVTLKGHKR 542
Query: 254 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 433
I V S+ ++ S DKT+++W ++ G + FE HT VL +F D Q VS
Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCG 602
Query: 434 RDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
D +KLWN +EC T D H D V + + +I + G D + +WH
Sbjct: 603 ADGLLKLWNVNTSECIATY--DQHEDKVWAL--AVGKKTEMIATGGGDAVINLWH 653
Score = 72.9 bits (171), Expect = 2e-13
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
G S ++ + LS D S + +R+WDL K R ++ H V+ +A +
Sbjct: 58 GESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLL 117
Query: 422 VSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
+ D+ + +W+ C + + GH VS + F P+ I++S D TV+VW L
Sbjct: 118 ATAGADRKVLVWDVDGGFCTHYFR--GHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
Query: 599 T--NCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
N + K + H + ++ +S DG S G+D LWDL+D
Sbjct: 176 NAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHD 223
Score = 66.1 bits (154), Expect = 2e-11
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
ETLK + +GH G V +A + ++ ++ D+ ++VW + + G GH
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLVWDV-----DGGFCTHYFRGH 143
Query: 248 SHFISDVVLSSDGN--YALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVD 409
+S ++ D N +SGS D T+R+WDL A T ++ E H V S+A S D
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED 203
Query: 410 NRQIVSGSRDKTIKLWNTL-AECKYTI 487
+ S RDK + LW+ CK T+
Sbjct: 204 GLTLFSAGRDKVVNLWDLHDYSCKATV 230
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/96 (30%), Positives = 49/96 (51%)
Frame = +2
Query: 458 NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHS 637
+T + K TI+ G SD ++ + SP+ + ++ S G R ++VW L K + GH
Sbjct: 47 STDSSVKSTIE--GESDTLTALALSPD--DKLLFSAGHSRQIRVWDLETLKCIRSWKGHE 102
Query: 638 GYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 745
G + + G L A+ G D K ++WD++ G H
Sbjct: 103 GPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTH 138
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 557 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
++C + + T+ +K G S L + +SPD L S G + +WDL
Sbjct: 34 IACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 79.0 bits (186), Expect = 3e-15
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 7/235 (2%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
+L TL H G + + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEEW-----KQQFEFHSGP 409
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
DV ++ ++A S S D + L + + + F H +V V + + S S
Sbjct: 410 TLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSD 468
Query: 437 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP-----NHANP--IIVSCGWDRTVKVWH 595
D T K+WN + + + H+ + +R+SP N+ N + S +D TVK+W
Sbjct: 469 DSTAKIWN-IKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD 527
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 760
K+ + GH + ++ SP+G ASG D +W + +GK + T N
Sbjct: 528 AELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN 582
Score = 62.9 bits (146), Expect = 2e-10
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 18/238 (7%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE--------NNYGIPQKRLYGH 247
L GH V A +P ++ S S D T +W + N + K G
Sbjct: 261 LEGHTSEVCACAWSPS-ASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGK 319
Query: 248 SHFISDVVLSSD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
S+ S V + D G +GS D R+W L G+ H + S+ ++
Sbjct: 320 SNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGD 378
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHS------DWVSCVRFSPNHANPIIVSCGWDR 577
+++GS D+T +W+ AE ++ Q + HS DW + V F+ + + +I C
Sbjct: 379 YLLTGSVDRTAVVWDVKAE-EWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLC---- 433
Query: 578 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
K+ K GH G +N V P GSL AS D A +W++ +H L
Sbjct: 434 --KIGETRPAK---TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDL 486
Score = 58.8 bits (136), Expect = 4e-09
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Frame = +2
Query: 59 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ--K 232
K+ ET + T GH G V + +P ++ S S D T +W + + + + + K
Sbjct: 434 KIGETRPAK-TFTGHQGEVNCVKWDPT-GSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
Query: 233 RLYGHSHFISDVVLSSDGNYAL--SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 406
+Y + ++ S S+D T++LWD GK F H + V S+AFS
Sbjct: 492 EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSP 551
Query: 407 DNRQIVSGSRDKTIKLWN 460
+ I SGS DK+I +W+
Sbjct: 552 NGEYIASGSLDKSIHIWS 569
Score = 34.7 bits (76), Expect = 0.069
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 578 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG--KHLHT 748
T + H+ N ++I GH+ + SP SL ASG D A +W + +G K +HT
Sbjct: 247 TSQTSHIPNSDVRILE-GHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHT 304
Score = 31.9 bits (69), Expect = 0.49
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 15/138 (10%)
Frame = +2
Query: 356 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS- 532
R E HT +V + A+S + SGS D T ++W ++ E + G + ++ +
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIW-SIPEGSFKAVHTGRNINALILKHAK 317
Query: 533 --PNHANPIIVSCGW------------DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 670
N + + + W D ++W L N +L H G + ++ +
Sbjct: 318 GKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKK 376
Query: 671 GSLCASGGKDMKAMLWDL 724
G +G D A++WD+
Sbjct: 377 GDYLLTGSVDRTAVVWDV 394
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 77.8 bits (183), Expect = 7e-15
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 522 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 329 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 502
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 577 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 634
Query: 503 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 679
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 635 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 689
Query: 680 CASGGKDMKAMLWDLNDGKHLHTLDHN 760
AS +D LW L+ G +H L ++
Sbjct: 690 VASVSED-AVKLWSLSSGDCIHELSNS 715
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 628 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 682
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 683 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 741
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 742 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 784
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 517 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 455 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 577 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 623
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T+ GH V I +PK +++ S + + W D N + + + G S + V
Sbjct: 588 TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW----DINASCV--RAVKGAS---TQV 638
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
L+ + + T+ ++D+ K F+ H+ +V SV +S + + S S D
Sbjct: 639 RFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-A 697
Query: 446 IKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 622
+KLW+ + +C + + + G+ V F P++ + +++ G + +++W+ K +
Sbjct: 698 VKLWSLSSGDCIHELSNSGNK--FHSVVFHPSYPDLLVI--GGYQAIELWNTMENKC-MT 752
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
GH ++ + SP + AS D +W
Sbjct: 753 VAGHECVISALAQSPSTGVVASASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 77.8 bits (183), Expect = 7e-15
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 329 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 502
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 636
Query: 503 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 679
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 637 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 680 CASGGKDMKAMLWDLNDGKHLHTLDHN 760
AS +D LW L+ G +H L ++
Sbjct: 692 VASVSED-AVKLWSLSSGDCIHELSNS 717
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 455 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 625
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T+ GH V I +PK +++ S + + W D N + + + G S + V
Sbjct: 590 TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW----DINASCV--RAVKGAS---TQV 640
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
L+ + + T+ ++D+ K F+ H+ +V SV +S + + S S D
Sbjct: 641 RFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-A 699
Query: 446 IKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 622
+KLW+ + +C + + + G+ V F P++ + +++ G + +++W+ K +
Sbjct: 700 VKLWSLSSGDCIHELSNSGNK--FHSVVFHPSYPDLLVI--GGYQAIELWNTMENKC-MT 754
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
GH ++ + SP + AS D +W
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 77.8 bits (183), Expect = 7e-15
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 329 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 502
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 636
Query: 503 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 679
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 637 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 680 CASGGKDMKAMLWDLNDGKHLHTLDHN 760
AS +D LW L+ G +H L ++
Sbjct: 692 VASVSED-AVKLWSLSSGDCIHELSNS 717
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 455 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 625
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T+ GH V I +PK +++ S + + W D N + + + G S + V
Sbjct: 590 TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW----DINASCV--RAVKGAS---TQV 640
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
L+ + + T+ ++D+ K F+ H+ +V SV +S + + S S D
Sbjct: 641 RFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-A 699
Query: 446 IKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 622
+KLW+ + +C + + + G+ V F P++ + +++ G + +++W+ K +
Sbjct: 700 VKLWSLSSGDCIHELSNSGNK--FHSVVFHPSYPDLLVI--GGYQAIELWNTMENKC-MT 754
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
GH ++ + SP + AS D +W
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 77.8 bits (183), Expect = 7e-15
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 329 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 502
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 636
Query: 503 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 679
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 637 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 680 CASGGKDMKAMLWDLNDGKHLHTLDHN 760
AS +D LW L+ G +H L ++
Sbjct: 692 VASVSED-AVKLWSLSSGDCIHELSNS 717
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 455 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 625
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T+ GH V I +PK +++ S + + W D N + + + G S + V
Sbjct: 590 TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW----DINASCV--RAVKGAS---TQV 640
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
L+ + + T+ ++D+ K F+ H+ +V SV +S + + S S D
Sbjct: 641 RFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-A 699
Query: 446 IKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 622
+KLW+ + +C + + + G+ V F P++ + +++ G + +++W+ K +
Sbjct: 700 VKLWSLSSGDCIHELSNSGNK--FHSVVFHPSYPDLLVI--GGYQAIELWNTMENKC-MT 754
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
GH ++ + SP + AS D +W
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 77.8 bits (183), Expect = 7e-15
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 329 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 502
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 636
Query: 503 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 679
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 637 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 680 CASGGKDMKAMLWDLNDGKHLHTLDHN 760
AS +D LW L+ G +H L ++
Sbjct: 692 VASVSED-AVKLWSLSSGDCIHELSNS 717
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 455 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 625
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T+ GH V I +PK +++ S + + W D N + + + G S + V
Sbjct: 590 TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFW----DINASCV--RAVKGAS---TQV 640
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
L+ + + T+ ++D+ K F+ H+ +V SV +S + + S S D
Sbjct: 641 RFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-A 699
Query: 446 IKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 622
+KLW+ + +C + + + G+ V F P++ + +++ G + +++W+ K +
Sbjct: 700 VKLWSLSSGDCIHELSNSGNK--FHSVVFHPSYPDLLVI--GGYQAIELWNTMENKC-MT 754
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
GH ++ + SP + AS D +W
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 77.4 bits (182), Expect = 1e-14
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQ 418
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 419 IVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
S S D+TIK+WN + + +T+ D H V+CV + P +++ D T KVW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 757
GH+ ++ V P+ + +G +D +W + +TL++
Sbjct: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 271
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
D Y ++GS D T ++WD + E HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 452 LWN 460
+W+
Sbjct: 255 IWH 257
Score = 58.4 bits (135), Expect = 5e-09
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Frame = +2
Query: 227 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 406
+++L S + V L + L+ + TL +W+ + FE V S F
Sbjct: 8 KRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVA 67
Query: 407 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 586
+ +V+G+ D I+++N K + + HSD++ CV P P ++S D +K
Sbjct: 68 RKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP--TLPYVLSSSDDMLIK 124
Query: 587 VWHLTN---CKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
+W C GHS Y+ VT +P D + AS D +W+L TLD
Sbjct: 125 LWDWEKGWACTQIFE--GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
Score = 35.5 bits (78), Expect = 0.039
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 332 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 76.6 bits (180), Expect = 2e-14
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQ 418
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 419 IVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
S S D+TIK+WN + + +T+ D H V+CV + P +++ D T KVW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 757
GH+ ++ V P+ + +G +D +W + +TL++
Sbjct: 216 YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 271
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 452 LWN 460
+W+
Sbjct: 255 IWH 257
Score = 35.1 bits (77), Expect = 0.052
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 332 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
Score = 32.7 bits (71), Expect = 0.28
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = +2
Query: 356 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 535
R+F ++ V SV I++ T+ +WN + T + V +F P
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQT-ITKSFEVTELPVRSAKFIP 67
Query: 536 NHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 712
+V+ D ++V++ T K+K+ HS Y+ V V P S DM
Sbjct: 68 R--KQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIK 124
Query: 713 LWDLNDG 733
LWD +G
Sbjct: 125 LWDWENG 131
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 76.6 bits (180), Expect = 2e-14
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQ 418
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 419 IVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
S S D+TIK+WN + + +T+ D H V+CV + P +++ D T KVW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 757
GH+ ++ V P+ + +G +D +W + +TL++
Sbjct: 216 YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 271
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 452 LWN 460
+W+
Sbjct: 255 IWH 257
Score = 35.1 bits (77), Expect = 0.052
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 332 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
Score = 32.7 bits (71), Expect = 0.28
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = +2
Query: 356 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 535
R+F ++ V SV I++ T+ +WN + T + V +F P
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQT-ITKSFEVTELPVRSAKFIP 67
Query: 536 NHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 712
+V+ D ++V++ T K+K+ HS Y+ V V P S DM
Sbjct: 68 R--KQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIK 124
Query: 713 LWDLNDG 733
LWD +G
Sbjct: 125 LWDWENG 131
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 76.6 bits (180), Expect = 2e-14
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQ 418
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 419 IVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
S S D+TIK+WN + + +T+ D H V+CV + P +++ D T KVW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 757
GH+ ++ V P+ + +G +D +W + +TL++
Sbjct: 216 YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 271
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 452 LWN 460
+W+
Sbjct: 255 IWH 257
Score = 35.1 bits (77), Expect = 0.052
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 332 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
Score = 32.7 bits (71), Expect = 0.28
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = +2
Query: 356 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 535
R+F ++ V SV I++ T+ +WN + T + V +F P
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQT-ITKSFEVTELPVRSAKFIP 67
Query: 536 NHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 712
+V+ D ++V++ T K+K+ HS Y+ V V P S DM
Sbjct: 68 R--KQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIK 124
Query: 713 LWDLNDG 733
LWD +G
Sbjct: 125 LWDWENG 131
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 76.6 bits (180), Expect = 2e-14
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 320 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 496
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL-- 90
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH D++ V+F +H NP IVS D+T+++W+ + GH+ Y+ + P
Sbjct: 91 GHLDYIRTVQF--HHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 677 LCASGGKDMKAMLWDL 724
L S D +WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/168 (26%), Positives = 75/168 (44%)
Frame = +2
Query: 113 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 292
V ++ +PK P IL+S + +W + G R H + V +
Sbjct: 12 VKGLSFHPKRP-WILASLHSGVIQLW-----DYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 293 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
+SG D +++W+ + H + +V F +N IVS S D+TI++WN +
Sbjct: 66 FVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSR 125
Query: 473 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 616
++ GH+ +V C F P ++VS D+TV+VW + K K
Sbjct: 126 TCISVL-TGHNHYVMCASFHPK--EDLVVSASLDQTVRVWDIGALKKK 170
Score = 59.7 bits (138), Expect = 2e-09
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
TL GH ++ + + + P I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
+ +S S D+T+R+WD+ A K ++ D++ FS N + G
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALK--KKSASPADDLMR--FSQMNSDLFGGVD---- 193
Query: 449 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL-KINH 625
A KY ++ GH V+ F P P+IVS DR VK+W + K +++
Sbjct: 194 ------AIVKYVLE--GHDRGVNWASFHPTL--PLIVSGADDRQVKLWRMNETKAWEVDT 243
Query: 626 L-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
L GH +++V + S +D +WD
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 47.6 bits (108), Expect = 9e-06
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSD-- 187
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
L G D ++ E H + V +F IVSG+ D+ +K
Sbjct: 188 --------LFGGVDAIVKYV----------LEGHDRGVNWASFHPTLPLIVSGADDRQVK 229
Query: 452 LWNTLAECKYTIQDD--GHSDWVSCVRFSPNHA-NPIIVSCGWDRTVKVWHLT 601
LW + E K D GH + VS V F HA IIVS D++++VW T
Sbjct: 230 LWR-MNETKAWEVDTLRGHMNNVSSVMF---HAKQDIIVSNSEDKSIRVWDAT 278
Score = 46.4 bits (105), Expect = 2e-05
Identities = 42/167 (25%), Positives = 72/167 (43%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+VS S D+T+++W+ A ++ S +RFS +++ + G D VK
Sbjct: 149 LVVSASLDQTVRVWDIGA-----LKKKSASPADDLMRFSQMNSD---LFGGVDAIVKY-- 198
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 736
L+ GH +N + P L SG D + LW +N+ K
Sbjct: 199 ----VLE----GHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETK 237
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 59 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 202
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 75.4 bits (177), Expect = 4e-14
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
I + +++G Y + G + LW++A GK +++ H + V + FS D+ +VSGS+
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 437 DKTIKLWNTL----------AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 586
D +I++W+ + Y + H+ V+ + N +I+S DRT K
Sbjct: 141 DGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCK 200
Query: 587 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
VW L+ KL + ++ +N + + P G + +G +D K + +N
Sbjct: 201 VWSLSRGKL-LKNIIFPSVINALALDPGGCVFYAGARDSKIYIGAIN 246
Score = 46.8 bits (106), Expect = 2e-05
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 18/194 (9%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL---------AAGKT--TRRFEDHT 376
K+ +GH ++ +V S D + +SGS D ++R+W L G T F +HT
Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHT 173
Query: 377 KDVLSVAFSVD--NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 550
V + N I+S S D+T K+W +L+ K +++ ++ + P
Sbjct: 174 MSVTDIVIDYGGCNAVIISSSEDRTCKVW-SLSRGK-LLKNIIFPSVINALALDPGGC-- 229
Query: 551 IIVSCGWDRTVKVWHLTNCK----LKINHLGHSG-YLNTVTVSPDGSLCASGGKDMKAML 715
+ + D + + + + + G + + DG+L SG +D +
Sbjct: 230 VFYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCV 289
Query: 716 WDLNDGKHLHTLDH 757
WD +H+ TL H
Sbjct: 290 WDPKSLRHVRTLIH 303
Score = 31.1 bits (67), Expect = 0.85
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
+I+SSS D+T VW L+R G K + S I+ + L G +G+ D + +
Sbjct: 189 VIISSSEDRTCKVWSLSR-----GKLLKNIIFPS-VINALALDPGGCVFYAGARDSKIYI 242
Query: 329 WDLAA-----GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
+ A + + K + +A+ D ++SGS D + +W+
Sbjct: 243 GAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWD 291
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 75.4 bits (177), Expect = 4e-14
Identities = 70/238 (29%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 257 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
+ + + Y +SGS D + +W+L G+ + + H V VA +DN I
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDI 126
Query: 422 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 601
VS S D+T+K W + D H + V P+ +VS D ++K+W
Sbjct: 127 VSSSVDQTLKRWR---NGQLVESWDAHQSPIQAVIRLPSGE---LVSGSSDASLKLW--- 177
Query: 602 NCKLKINHL-GHSGYLNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLHTLDHNDII 769
K + L GH+ + + V PD G L AS D LW L+ L + H ++
Sbjct: 178 KGKTSLQTLSGHTDTVRGLAVMPDLGFLSAS--HDGSIRLWALSGEVLLEMVGHTSLV 233
Score = 56.0 bits (129), Expect = 3e-08
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
TL+GH VT +A + + I+SSS D+TL W+ + ++ H I V
Sbjct: 108 TLKGHQMQVTGVAIDN---EDIVSSSVDQTLKRWRNGQLVESWD-------AHQSPIQAV 157
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
+ G +SGS D +L+LW GKT+ + HT V +A D +S S D +
Sbjct: 158 IRLPSGEL-VSGSSDASLKLWK---GKTSLQTLSGHTDTVRGLAVMPD-LGFLSASHDGS 212
Query: 446 IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH 625
I+LW E ++ GH+ V V H++ +IVS DR K+W C + H
Sbjct: 213 IRLWALSGEV--LLEMVGHTSLVYSV---DAHSSGLIVSASEDRHAKIWKDGVCVQSLEH 267
Query: 626 LG 631
G
Sbjct: 268 PG 269
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 75.4 bits (177), Expect = 4e-14
Identities = 70/238 (29%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 257 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
+ + + Y +SGS D + +W+L G+ + + H V VA +DN I
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDI 126
Query: 422 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 601
VS S D+T+K W + D H + V P+ +VS D ++K+W
Sbjct: 127 VSSSVDQTLKRWR---NGQLVESWDAHQSPIQAVIRLPSGE---LVSGSSDASLKLW--- 177
Query: 602 NCKLKINHL-GHSGYLNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLHTLDHNDII 769
K + L GH+ + + V PD G L AS D LW L+ L + H ++
Sbjct: 178 KGKTSLQTLSGHTDTVRGLAVMPDLGFLSAS--HDGSIRLWALSGEVLLEMVGHTSLV 233
Score = 56.0 bits (129), Expect = 3e-08
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
TL+GH VT +A + + I+SSS D+TL W+ + ++ H I V
Sbjct: 108 TLKGHQMQVTGVAIDN---EDIVSSSVDQTLKRWRNGQLVESWD-------AHQSPIQAV 157
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
+ G +SGS D +L+LW GKT+ + HT V +A D +S S D +
Sbjct: 158 IRLPSGEL-VSGSSDASLKLWK---GKTSLQTLSGHTDTVRGLAVMPD-LGFLSASHDGS 212
Query: 446 IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH 625
I+LW E ++ GH+ V V H++ +IVS DR K+W C + H
Sbjct: 213 IRLWALSGEV--LLEMVGHTSLVYSV---DAHSSGLIVSASEDRHAKIWKDGVCVQSLEH 267
Query: 626 LG 631
G
Sbjct: 268 PG 269
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 74.9 bits (176), Expect = 5e-14
Identities = 46/175 (26%), Positives = 77/175 (44%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH ++ V + +GS D+T+++WD+A G H V +A S +
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+ S DK +K W+ L + K GH V C+ P ++++ G D +VW
Sbjct: 226 YMFSAGDDKQVKCWD-LEQNKVIRSYHGHLHGVYCLALHP--TLDVVLTGGRDSVCRVWD 282
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 760
+ K++I L H + +V P +G D WDL GK + T+ ++
Sbjct: 283 I-RTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNH 336
Score = 73.3 bits (172), Expect = 2e-13
Identities = 51/220 (23%), Positives = 91/220 (41%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+S+ Y S DK ++ WDL K R + H V +A +++G RD +
Sbjct: 220 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 631
+W+ + + + H V V P +P +++ D T+K W L K
Sbjct: 280 VWDIRTKMQIFVLP--HDSDVFSVLARP--TDPQVITGSHDSTIKFWDLRYGKSMATITN 335
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
H + + + P + S D + L G+ H +
Sbjct: 336 HKKTVRAMALHPKENDFVSASAD-NIKKFSLPKGEFCHNM 374
Score = 64.9 bits (151), Expect = 6e-11
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 6/215 (2%)
Frame = +2
Query: 134 PKYPDMILSSSRDKTLIVWKLT--RDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGS 307
PK + S+ +K L+V RD NN G P K + + S+ N + +
Sbjct: 88 PKGSKELRKSATEKALVVGPTLPPRDLNNTGNPGKS----TAILPAPGSFSERNLSTAAL 143
Query: 308 WDKTLRLWDL----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 475
++ W A K R + H V SVAF N +GS D+TIK+W+ +A
Sbjct: 144 MERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATG 202
Query: 476 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
+ GH V + S H + S G D+ VK W L K+ ++ GH + +
Sbjct: 203 VLKLTLTGHIGQVRGLAVSNRHT--YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCL 260
Query: 656 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 760
+ P + +GG+D +WD+ + L H+
Sbjct: 261 ALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHD 295
Score = 32.7 bits (71), Expect = 0.28
Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 5/169 (2%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 280
H+ V + P P +I + S D T+ W L YG + H + + L
Sbjct: 294 HDSDVFSVLARPTDPQVI-TGSHDSTIKFWDL-----RYGKSMATITNHKKTVRAMALHP 347
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
N +S S D ++ + L G+ +D+++ ++ +V+G + W+
Sbjct: 348 KENDFVSASADN-IKKFSLPKGEFCHNMLSLQRDIINAVAVNEDGVMVTGGDKGGLWFWD 406
Query: 461 -----TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
+ +Q + +V+C D+T+K+W
Sbjct: 407 WKSGHNFQRAETIVQPGSLESEAGIYAACYDQTGSRLVTCEGDKTIKMW 455
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 74.1 bits (174), Expect = 9e-14
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Frame = +2
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 412
R++ H +V + +G D+ +++WD +G + ++L +A + DN
Sbjct: 226 RIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDN 285
Query: 413 RQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCV---RFSPNHANPIIVSCGWDRT 580
+ +++ + + +W+ + ++T+ GH+D V V +FS H +VS +DRT
Sbjct: 286 KSVIAATSSNNLFVWDVSSGRVRHTL--TGHTDKVCAVDVSKFSSRH----VVSAAYDRT 339
Query: 581 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL-HTLDH 757
+K+W L + N + + N + +S DG SG D LWD+ GK L H
Sbjct: 340 IKLWDL-HKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGH 398
Query: 758 NDIIT 772
+ +T
Sbjct: 399 SSAVT 403
Score = 66.9 bits (156), Expect = 1e-11
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
+ + +D+ + +W + N G K LYG I D+ ++ D ++ + L +W
Sbjct: 246 LFTGGQDRAVKMW-----DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 332 DLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHS 505
D+++G+ HT V +V S +R +VS + D+TIKLW+ C T+ +
Sbjct: 301 DVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNC 360
Query: 506 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 685
+ + C+ + S D +++W + KL GHS + +V++S +G+
Sbjct: 361 NAI-CLSID----GLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRIL 415
Query: 686 SGGKD 700
+ G+D
Sbjct: 416 TSGRD 420
Score = 61.7 bits (143), Expect = 5e-10
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 5/199 (2%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 328
+++++ L VW ++ G + L GH+ + V +S + +S ++D+T++L
Sbjct: 288 VIAATSSNNLFVWDVSS-----GRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKL 342
Query: 329 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 508
WDL G T T + ++ S+D + SG D ++LW+ + K + GHS
Sbjct: 343 WDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWD-IQTGKLLSEVAGHSS 400
Query: 509 WVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL--KINHLGH--SGYLNTVTVSPDGS 676
V+ V S N N I+ S G D V+ ++ + G+ + + +SPD
Sbjct: 401 AVTSVSLSRN-GNRILTS-GRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDD 458
Query: 677 LCASGGKDMKAMLWDLNDG 733
A+G D +W L+ G
Sbjct: 459 YVAAGSADGSVHVWSLSKG 477
Score = 60.1 bits (139), Expect = 2e-09
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
++R TL GH V + + ++S++ D+T+ +W L + G + S+
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK-----GYCTNTVLFTSN- 359
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
+ + LS DG SG D LRLWD+ GK H+ V SV+ S + +I++ R
Sbjct: 360 CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGR 419
Query: 437 DKTIKLWNT-LAECKYTIQDDGH---SDWV-SCVRFSPNHANPIIVSCGWDRTVKVWHLT 601
D +++T E T++ G+ S+W SC+ SP+ + + + D +V VW L+
Sbjct: 420 DNVHNVFDTRTLEICGTLRASGNRLASNWSRSCI--SPD--DDYVAAGSADGSVHVWSLS 475
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 73.7 bits (173), Expect = 1e-13
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 9/217 (4%)
Frame = +2
Query: 146 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 325
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T R
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDD-- 496
+ L +GK + F HT V F+ D +I++ S D T+K+W++ +C T +
Sbjct: 331 IHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFKPPPP 390
Query: 497 --GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH--SGYLNTVTVS 664
G V+ + P + I+V C ++ + L +K G+ G VS
Sbjct: 391 LRGTDASVNSIHLFPKNTEHIVV-CNKTSSIYIMTLQGQVVKSFSSGNREGGDFVAACVS 449
Query: 665 PDGSLCASGGKDMKAMLWDLNDG--KHLHTLDHNDII 769
G G+D K ++ G +H + D+I
Sbjct: 450 TKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVI 486
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Frame = +2
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSG 430
S DG + S S D + +WD +GK + F H VL + FS D+ + SG
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASG 281
Query: 431 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 610
S+D IK+W + + D HS V+ + FS + + ++S +D+T ++ L + K
Sbjct: 282 SQDGKIKIWR-IRTGVCIRRFDAHSQGVTSLSFSRDGSQ--LLSTSFDQTARIHGLKSGK 338
Query: 611 LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
L GH+ Y+N + DGS + D +WD
Sbjct: 339 LLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 62.1 bits (144), Expect = 4e-10
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Frame = +2
Query: 152 ILSSSRDKTLIVW-----KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDK 316
+ SSS D + VW KL +D Y + + H + + S D SGS D
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQ-YQADESFMM-HDDPVLCIDFSRDSEMLASGSQDG 285
Query: 317 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 496
+++W + G RRF+ H++ V S++FS D Q++S S D+T ++ + L K +
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI-HGLKSGKLLKEFR 344
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
GH+ +V+ F+ + + I++ D TVKVW
Sbjct: 345 GHTSYVNHAIFTSDGSR--IITASSDCTVKVW 374
Score = 35.5 bits (78), Expect = 0.039
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN--------HLGHSGYLNT 652
G C RFSP+ + S D ++VW + KLK + + H +
Sbjct: 211 GKKSHAECARFSPD--GQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLC 268
Query: 653 VTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIIT 772
+ S D + ASG +D K +W + G + D H+ +T
Sbjct: 269 IDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVT 309
Score = 33.1 bits (72), Expect = 0.21
Identities = 31/130 (23%), Positives = 53/130 (40%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
+T K LRG + V I PK + I+ ++ ++ + L R G
Sbjct: 383 QTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGNREGGD 442
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
F++ V S+ G++ DK L ++ +G H KDV+ + + +
Sbjct: 443 --FVAACV-STKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLAT 499
Query: 428 GSRDKTIKLW 457
S D T+KLW
Sbjct: 500 YSEDCTMKLW 509
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 72.9 bits (171), Expect = 2e-13
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 320 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 496
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL-- 90
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH D++ V+F +H P IVS D+T+++W+ + GH+ Y+ + P
Sbjct: 91 GHLDYIRTVQF--HHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 677 LCASGGKDMKAMLWDL 724
L S D +WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 54.4 bits (125), Expect = 8e-08
Identities = 41/162 (25%), Positives = 72/162 (44%)
Frame = +2
Query: 113 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 292
V ++ +PK P IL+S + +W + G R H + V +
Sbjct: 12 VKGLSFHPKRP-WILASLHSGVIQLW-----DYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 293 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
+SG D +++W+ + H + +V F + IVS S D+TI++WN +
Sbjct: 66 FVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
Query: 473 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
++ GH+ +V C F P ++VS D+TV+VW +
Sbjct: 126 TCVSVL-TGHNHYVMCASFHPK--EDLVVSASLDQTVRVWDI 164
Score = 53.6 bits (123), Expect = 1e-07
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 28/199 (14%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQ--DD------------------------GHSDWVS 517
+VS S D+T+++W+ A K T+ DD GH V+
Sbjct: 149 LVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVN 208
Query: 518 CVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL-KINHL-GHSGYLNTVTVSPDGSLCASG 691
F P P+IVS DR VK+W + K +++ L GH +++V + S
Sbjct: 209 WAAFHP--TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSN 266
Query: 692 GKDMKAMLWDLNDGKHLHT 748
+D +WD L T
Sbjct: 267 SEDKSIRVWDATKRTGLQT 285
Score = 44.4 bits (100), Expect = 9e-05
Identities = 31/121 (25%), Positives = 51/121 (42%)
Frame = +2
Query: 359 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 538
+FE + V ++F I++ I+LW+ D+ H V V F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDE-HEGPVRGVHF--H 60
Query: 539 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
++ P+ VS G D +KVW+ N + LGH Y+ TV + S D +W
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 719 D 721
+
Sbjct: 121 N 121
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L GH+ V A +P P +I+S + D+ + +W++ + L GH + +S V+
Sbjct: 200 LEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETK---AWEVDTLRGHMNNVSSVM 255
Query: 272 LSSDGNYALSGSWDKTLRLWD 334
+ + +S S DK++R+WD
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 59 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 202
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 72.1 bits (169), Expect = 4e-13
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 250
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 251 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 264
Query: 425 SGSRDKTIKLWNTLAECK---YTIQDDGHSDWVSCVRFS 532
+GS D T +L++ + Y DG + V+ + FS
Sbjct: 265 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 303
Score = 60.5 bits (140), Expect = 1e-09
Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 15/240 (6%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
TL+GH G V + P+ + I+S+S+D LIVW + + I + +
Sbjct: 60 TLQGHTGKVYSLDWTPER-NRIVSASQDGRLIVWNALTSQKTHAIKLPCAW-----VMTC 113
Query: 269 VLSSDGNYALSGSWDKTLRLWDLA--AGK-----TTRRFEDHTKDVLSVAFSVDNRQ--I 421
S +G G D ++ L+ A K +R H + +S V N +
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGH-RGYVSCCQYVPNEDAHL 172
Query: 422 VSGSRDKTIKLWNTLAECKYTIQ----DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
++ S D+T LW+ K ++ GH+ V V S ++ N I S D T ++
Sbjct: 173 ITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFI-SGSCDSTARL 231
Query: 590 WHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HND 763
W + GH G +NTV PDG +G D L+D+ G L H D
Sbjct: 232 WDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD 291
Score = 53.2 bits (122), Expect = 2e-07
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
+ L GH+ + + + + N +S S D L +W+ + T + V++ AFS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 410 NRQIVSGSRDKTIKLW--NTLAECKYTIQDD----GHSDWVSCVRFSPNHANPIIVSCGW 571
+ + G D ++ ++ A+ T+ GH +VSC ++ PN +I S G
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG- 177
Query: 572 DRTVKVWHLTNCKLKINHLG---HSGY-LNTVTVSPDGS---LCASGGKDMKAMLWD 721
D+T +W +T LK + G SG+ + ++VS GS SG D A LWD
Sbjct: 178 DQTCILWDVTT-GLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWD 233
Score = 48.4 bits (110), Expect = 5e-06
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Frame = +2
Query: 356 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 535
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 536 NHANPIIVSC-GWDRTVKVWHLTNCKLK-----INHL--GHSGYLNTVTVSP--DGSLCA 685
N + V+C G D ++ L++ K ++ + GH GY++ P D L
Sbjct: 118 NGQS---VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLIT 174
Query: 686 SGGKDMKAMLWDLNDG 733
S G D +LWD+ G
Sbjct: 175 SSG-DQTCILWDVTTG 189
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 72.1 bits (169), Expect = 4e-13
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFSVDNRQIVSG 430
+ V + Y +S S D T +DL++G + D +K D + AF D + +G
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 431 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 610
+ +K+W+ ++ + DGH+ V+ + FS N ++ + V++W L K
Sbjct: 372 TSQSVVKIWDVKSQAN-VAKFDGHTGEVTAISFS---ENGYFLATAAEDGVRLWDLR--K 425
Query: 611 LKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 706
L+ S N+V P GS D+K
Sbjct: 426 LRNFKSFLSADANSVEFDPSGSYLGIAASDIK 457
Score = 61.7 bits (143), Expect = 5e-10
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVA 397
L GHS ++ V D + L+ S DKT+R+W + A G T DH+ +V +V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVT 316
Query: 398 FSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
N+ VS S D T ++ + C + DD + + F H + +I+ G
Sbjct: 317 VHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAF---HPDGLILGTGTS 373
Query: 575 RT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
++ VK+W + + GH+G + ++ S +G A+ +D LWDL
Sbjct: 374 QSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDL 423
Score = 58.8 bits (136), Expect = 4e-09
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Frame = +2
Query: 263 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 442
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 443 TIKLWNTLAE----CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT--N 604
T+++W + C YT+ D HS V V P N VS D T + L+ +
Sbjct: 287 TVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHP--TNKYFVSASLDGTWCFYDLSSGS 342
Query: 605 CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIIT 772
C +++ + PDG + +G +WD+ ++ D H +T
Sbjct: 343 CLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVT 399
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 72.1 bits (169), Expect = 4e-13
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFSVDNRQIVSG 430
+ V + Y +S S D T +DL++G + D +K D + AF D + +G
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 431 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 610
+ +K+W+ ++ + DGH+ V+ + FS N ++ + V++W L K
Sbjct: 372 TSQSVVKIWDVKSQAN-VAKFDGHTGEVTAISFS---ENGYFLATAAEDGVRLWDLR--K 425
Query: 611 LKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 706
L+ S N+V P GS D+K
Sbjct: 426 LRNFKSFLSADANSVEFDPSGSYLGIAASDIK 457
Score = 61.7 bits (143), Expect = 5e-10
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVA 397
L GHS ++ V D + L+ S DKT+R+W + A G T DH+ +V +V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVT 316
Query: 398 FSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
N+ VS S D T ++ + C + DD + + F H + +I+ G
Sbjct: 317 VHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAF---HPDGLILGTGTS 373
Query: 575 RT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
++ VK+W + + GH+G + ++ S +G A+ +D LWDL
Sbjct: 374 QSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDL 423
Score = 58.8 bits (136), Expect = 4e-09
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Frame = +2
Query: 263 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 442
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 443 TIKLWNTLAE----CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT--N 604
T+++W + C YT+ D HS V V P N VS D T + L+ +
Sbjct: 287 TVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHP--TNKYFVSASLDGTWCFYDLSSGS 342
Query: 605 CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIIT 772
C +++ + PDG + +G +WD+ ++ D H +T
Sbjct: 343 CLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVT 399
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 71.7 bits (168), Expect = 5e-13
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
S DG SG D ++++D ++G + + V + +++GS D ++
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSL 179
Query: 449 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK---LKI 619
+WN E Y GH+ V+C F+P+ +I + D ++ VW+ C+ +
Sbjct: 180 WMWNADKEA-YLNMFSGHNLNVTCGDFTPD--GKLICTGSDDASLIVWNPKTCESIHIVK 236
Query: 620 NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDII 769
H H+ L + ++ + SL SG KD + ++ GK + +L+ H D +
Sbjct: 237 GHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSV 287
Score = 61.7 bits (143), Expect = 5e-10
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Frame = +2
Query: 284 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 463
G+ L+GS D +L +W+ F H +V F+ D + I +GS D ++ +WN
Sbjct: 167 GHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNP 226
Query: 464 -LAECKYTIQDDG-HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHS 637
E + ++ H++ ++C+ + N + + +S D +V + ++ K+ + H+
Sbjct: 227 KTCESIHIVKGHPYHTEGLTCLDINSNSS--LAISGSKDGSVHIVNIVTGKVVSSLNSHT 284
Query: 638 GYLNTVTVSPDGS---LCASGGKDMKAMLWDLNDGKHLHTLDHNDIIT 772
+ V SP + L A+GG D K ++WDL +H + +T
Sbjct: 285 DSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEGVT 332
Score = 51.6 bits (118), Expect = 6e-07
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 277
GHN VT P +I + S D +LIVW E+ + I + Y H+ ++ + ++
Sbjct: 195 GHNLNVTCGDFTPD-GKLICTGSDDASLIVWNPKTCESIH-IVKGHPY-HTEGLTCLDIN 251
Query: 278 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSGSRDKTI 448
S+ + A+SGS D ++ + ++ GK HT V V FS + I +G DK +
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKL 311
Query: 449 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH--LTNCKLKIN 622
+W+ I + H + V+ + + + + C + TV +W L NC +
Sbjct: 312 IIWDLQHSTPRFICE--HEEGVTSLTWI-GTSKYLATGCA-NGTVSIWDSLLGNC-VHTY 366
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
H GH + ++VS + S D A +++ ++
Sbjct: 367 H-GHQDAVQAISVSTNTDFIVSVSVDNTARVFESSE 401
Score = 50.8 bits (116), Expect = 1e-06
Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 1/182 (0%)
Frame = +2
Query: 203 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 379
DEN+ + GH + + S +D +G D LW + G H
Sbjct: 57 DENDDSV--HTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKD 114
Query: 380 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIV 559
V +AFS D + + SG D +++++ + + DG + VR+ P I++
Sbjct: 115 SVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVL-DGPGAGIEWVRWHPR--GHIVL 171
Query: 560 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 739
+ D ++ +W+ GH+ + +PDG L +G D ++W+ +
Sbjct: 172 AGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCES 231
Query: 740 LH 745
+H
Sbjct: 232 IH 233
Score = 41.1 bits (92), Expect = 8e-04
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSS--RDKTLIVWKLTRDENNYGIPQKRLYG 244
T K+ +L H V + +P + L+++ DK LI+W L + +
Sbjct: 273 TGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRF------ICE 326
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
H ++ + Y +G + T+ +WD G + H V +++ S + IV
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 425 SGSRDKTIKLWNT 463
S S D T +++ +
Sbjct: 387 SVSVDNTARVFES 399
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 71.7 bits (168), Expect = 5e-13
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSG 430
+ D+ S+DG+ L+ +DK ++ WD G+ F + D++Q +++G
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 388
Query: 431 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 610
DK I W+ + + T + D H V+ + F N N V+ D++++VW
Sbjct: 389 MSDKKIVQWD-INTGEVTQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEF-GIP 444
Query: 611 LKINHLG--HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
+ I ++ H + +++V P+G+ A+ D + +++ +
Sbjct: 445 VVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRE 486
Score = 64.5 bits (150), Expect = 7e-11
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 7/167 (4%)
Frame = +2
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 466
N L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 442
Query: 467 AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN----HLGH 634
+ H + + PN + + D + ++ T + ++N GH
Sbjct: 443 IPVVIKYISEPHMHSMPSISVHPN--GNWLAAQSLDNQILIYS-TRERFQLNKKKRFAGH 499
Query: 635 --SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDI 766
+GY V SPDG SG + K WD K TL HN +
Sbjct: 500 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGV 546
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNC-KLKINHLGHSGYLNTVTVSPDG 673
GH+ VS +RF P + +++S G D VK+W + N K ++GH+ + + S DG
Sbjct: 280 GHTKGVSAIRFFPKQGH-LLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDG 338
Query: 674 SLCASGGKDMKAMLWDLNDGKHLHTLDHNDI 766
S + G D WD G+ + T I
Sbjct: 339 SKFLTAGYDKNIKYWDTETGQVISTFSTGKI 369
Score = 41.5 bits (93), Expect = 6e-04
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Frame = +2
Query: 155 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 325
++SS DK+L VW+ +GIP Y H H + + + +GN+ + S D +
Sbjct: 428 VTSSDDKSLRVWE-------FGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQIL 480
Query: 326 LWDLAAG---KTTRRFEDHTKD--VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 490
++ +RF H V FS D R ++SG + W+ + CK
Sbjct: 481 IYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-CKVFRT 539
Query: 491 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
H+ + P + + +CGWD +K W
Sbjct: 540 LKCHNGVCIGAEWHPLEQSKV-ATCGWDGLIKYW 572
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 70.9 bits (166), Expect = 9e-13
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Frame = +2
Query: 140 YPDM--ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWD 313
YPD I++ D+++ +W L E Q+ + +SD+ ++ DG + +S D
Sbjct: 370 YPDGQGIIAGMTDRSICMWDLDGREKECWKGQR-----TQKVSDIAMTDDGKWLVSVCKD 424
Query: 314 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD 493
+ L+D A T R + + S + S DN+ I+ ++ I+LWN + K +
Sbjct: 425 SVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRY 482
Query: 494 DGHSDWVSCVRFS-PNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 670
GH +R + I S D V +WH + KL + GH+G +N V+ SP
Sbjct: 483 KGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPT 542
Query: 671 G-SLCASGGKDMKAMLWDLN 727
+ AS D +W L+
Sbjct: 543 NLHMLASASDDGTIRIWGLD 562
Score = 57.6 bits (133), Expect = 9e-09
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +2
Query: 110 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR-LYGHSHFISDVVLSSDG 286
W Q + N KY + SSS+D+T I+W+++ D + I K L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISADGH---ISLKHTLVGHHKPVIAILWSPDD 331
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
L+ ++ +R WD+ +G +E +S + D + I++G D++I +W+
Sbjct: 332 RQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWD 389
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Frame = +2
Query: 347 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSC 520
+T + E HT +V + FS + + + S S+D+T +W A+ +++ GH V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 521 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS--PDGSLCASGG 694
+ +SP+ +++CG + ++ W + + H+ G ++ ++ PDG +G
Sbjct: 325 ILWSPDDRQ--VLTCGAEEVIRRWDVDSGDCV--HMYEKGGISPISCGWYPDGQGIIAGM 380
Query: 695 KDMKAMLWDLNDGK 736
D +WDL DG+
Sbjct: 381 TDRSICMWDL-DGR 393
Score = 51.2 bits (117), Expect = 7e-07
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFSV 406
L H+ + + S +G Y S S D+T +W+++A H K V+++ +S
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 407 DNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 583
D+RQ+++ ++ I+ W+ +C + + G S +SC + I++ DR++
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISP-ISCGWYPDGQG---IIAGMTDRSI 385
Query: 584 KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 763
+W L + + + ++ + ++ DG S KD L+D + ++ D
Sbjct: 386 CMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD-REATVERLIEEED 444
Query: 764 IIT 772
+IT
Sbjct: 445 MIT 447
Score = 45.2 bits (102), Expect = 5e-05
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
DG ++G D+++ +WDL + T+ V +A + D + +VS +D I L++
Sbjct: 372 DGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD 431
Query: 461 TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT-NCKLKINHLGHS 637
A + I+++ D ++ FS ++ N I+ ++ +++W++ + K+ + GH
Sbjct: 432 REATVERLIEEE---DMITS--FSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHK 486
Query: 638 GYLNTVTVSPDG---SLCASGGKDMKAMLWDLNDGK 736
+ G + ASG +D + +W + GK
Sbjct: 487 RSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGK 522
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 250
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 251 HFISDVVLSSDGN 289
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/119 (30%), Positives = 66/119 (55%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH + + DGNYAL+ D+T+RLW+ G + ++ H ++V V + DN
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
+ S D+ + W+ ++ + + GH V+ V+F N ++ ++VS G+DR+++VW
Sbjct: 74 KFCSCGGDRQVYYWD-VSTGRVIRKFRGHDGEVNAVKF--NDSSSVVVSAGFDRSLRVW 129
Score = 68.1 bits (159), Expect = 6e-12
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L+GH G V N + L+ +D+T+ +W R GI K H + DV
Sbjct: 14 LKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNPHR-----GILIKTYKSHGREVRDVH 67
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
++SD S D+ + WD++ G+ R+F H +V +V F+ + +VS D++++
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLR 127
Query: 452 LWNTLAECKYTIQ-DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 628
+W+ + +Q D D V V + I+ D TV+ + + + ++L
Sbjct: 128 VWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE----IIGGSVDGTVRTFDMRIGREMSDNL 183
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 742
G +N +++S DG+ +G D L D G+ L
Sbjct: 184 GQP--VNCISISNDGNCVLAGCLDSTLRLLDRTTGELL 219
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/125 (27%), Positives = 53/125 (42%)
Frame = +2
Query: 347 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 526
K + H VL+ F+ D ++ +D+TI+LWN H V V
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTY-KSHGREVRDVH 67
Query: 527 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 706
+ ++A SCG DR V W ++ ++ GH G +N V + S+ S G D
Sbjct: 68 VTSDNAK--FCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRS 125
Query: 707 AMLWD 721
+WD
Sbjct: 126 LRVWD 130
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIVSG 430
++ + +S+DGN L+G D TLRL D G+ + ++ H + N ++ G
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 431 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
S D + W+ L + K + H V+ V + P +++ D T++VW
Sbjct: 247 SEDGLVFFWD-LVDAKVLSKFRAHDLVVTSVSYHPK--EDCMLTSSVDGTIRVW 297
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/89 (26%), Positives = 40/89 (44%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH V RF N ++CG DRT+++W+ L + H + V V+ D +
Sbjct: 16 GHEGAVLAARF--NGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 677 LCASGGKDMKAMLWDLNDGKHLHTLDHND 763
S G D + WD++ G+ + +D
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHD 102
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 193
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 68.9 bits (161), Expect = 3e-12
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 4/210 (1%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 277
H V + NP D L+SS D T+ +W + R + + H++ + V +
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS-----VRTFKEHAYCVYQAVWNP 159
Query: 278 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 454
G+ S S D TLR+WD+ +T H ++LS ++ D+ + + S DKT+K+
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKV 219
Query: 455 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW-HLTNCKLKINHLG 631
W+ + +GH V V+FSP H +I SC +D +V +W ++ L +
Sbjct: 220 WDVRSYRVPLAVLNGHGYAVRKVKFSP-HRRSLIASCSYDMSVCLWDYMVEDALVGRYDH 278
Query: 632 HSGYLNTVTVSP-DGSLCASGGKDMKAMLW 718
H+ + + +S L AS G D +W
Sbjct: 279 HTEFAVGIDMSVLVEGLMASTGWDELVYVW 308
Score = 59.7 bits (138), Expect = 2e-09
Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAE 472
L+ SWD T++LW + + R F++H V ++ + + S S D T+++W+ + E
Sbjct: 123 LTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD-VRE 181
Query: 473 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LN 649
T+ H + ++ + + I+ + D+TVKVW + + ++ + L GY +
Sbjct: 182 PGSTMIIPAHDFEILSCDWN-KYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVR 240
Query: 650 TVTVSPD-GSLCASGGKDMKAMLWD 721
V SP SL AS DM LWD
Sbjct: 241 KVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 58.4 bits (135), Expect = 5e-09
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T + H V Q NPK+ D+ S+S D TL +W + + IP +S
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDF----EILSCD 199
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQIV-SGSRDK 442
D + S DKT+++WD+ + + H V V FS R ++ S S D
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 259
Query: 443 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
++ LW+ + E + D H+++ + S ++ S GWD V VW
Sbjct: 260 SVCLWDYMVEDALVGRYDHHTEFAVGIDMSV-LVEGLMASTGWDELVYVW 308
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 67.7 bits (158), Expect = 8e-12
Identities = 52/219 (23%), Positives = 98/219 (44%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
+LR TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
+S V + S G L+ + D T+++WD+ + +LS+ + + + R
Sbjct: 942 VSCVKMLS-GERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGR 1000
Query: 437 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 616
D +W+ + K + GH+ W+ +R +++ D T +VW ++
Sbjct: 1001 DTVANIWD-IRSGKQMHKLKGHTKWIRSIRM----VEDTLITGSDDWTARVWSVSRGSCD 1055
Query: 617 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 733
H+G + +V SP +G D W+ ++G
Sbjct: 1056 AVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEG 1094
Score = 64.5 bits (150), Expect = 7e-11
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
D + +SGS D +++WD L + + HT V ++ S D +IVSGS D ++ +
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIV 923
Query: 455 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 634
W+ + + GH VSCV+ +++ D TVK+W + + + +G
Sbjct: 924 WDKQTT-QLLEELKGHDSQVSCVKMLSGER---VLTAAHDGTVKMWDVRT-DMCVATVGR 978
Query: 635 -SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
S + ++ + A+ G+D A +WD+ GK +H L
Sbjct: 979 CSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKL 1018
Score = 50.8 bits (116), Expect = 1e-06
Identities = 47/226 (20%), Positives = 98/226 (43%), Gaps = 12/226 (5%)
Frame = +2
Query: 92 LRGHNGWVTQI--ATNPKYPDMI---------LSSSRDKTLIVWKLTRDENNYGIPQKRL 238
L+GH G VT + T + D++ +S S D + +W + + + L
Sbjct: 839 LKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSEL---RATL 895
Query: 239 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 418
GH+ + +SSD +SGS D ++ +WD + + H V V + +
Sbjct: 896 KGHTGTVR--AISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGER 952
Query: 419 IVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+++ + D T+K+W+ + C T+ G + + + + I+ + G D +W
Sbjct: 953 VLTAAHDGTVKMWDVRTDMCVATV---GRCS-SAILSLEYDDSTGILAAAGRDTVANIWD 1008
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 733
+ + K GH+ ++ ++ + D + +G D A +W ++ G
Sbjct: 1009 IRSGKQMHKLKGHTKWIRSIRMVEDTLI--TGSDDWTARVWSVSRG 1052
Score = 43.6 bits (98), Expect = 1e-04
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
+T +L L+GH+ V+ + + +L+++ D T+ +W + D + +
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG--ERVLTAAHDGTVKMWDVRTDMCVATVGRCS---- 980
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
S +S S G A +G D +WD+ +GK + + HTK + S+ D +++
Sbjct: 981 SAILSLEYDDSTGILAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LIT 1037
Query: 428 GSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSP 535
GS D T ++W+ + C + H+ V V +SP
Sbjct: 1038 GSDDWTARVWSVSRGSCDAVLA--CHAGPVQSVEYSP 1072
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 66.9 bits (156), Expect = 1e-11
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 5/181 (2%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDVLSVAFSV 406
L GHS ++ + D + L+ S DKT+R+W + G T R +DH+ +V +V
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 407 DNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT- 580
N+ VS S D T ++ + C + D +D V+ + H + +I+ G ++
Sbjct: 320 TNKYFVSASLDSTWCFYDLSSGLCLAQVTDASEND-VNYTA-AAFHPDGLILGTGTAQSI 377
Query: 581 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 760
VK+W + + GH+G + +++ S +G A+ D LWDL K+ T D
Sbjct: 378 VKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRLWDLRKLKNFRTFDFP 436
Query: 761 D 763
D
Sbjct: 437 D 437
Score = 60.9 bits (141), Expect = 9e-10
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
++ TL GH+ VT I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK-DV--LSVAFSVDNRQIVS 427
+ V + + Y +S S D T +DL++G + D ++ DV + AF D + +
Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGT 371
Query: 428 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNC 607
G+ +K+W+ ++ + GH+ ++ + FS N + + D V++W L
Sbjct: 372 GTAQSIVKIWDVKSQAN-VAKFGGHNGEITSISFSEN--GYFLATAALD-GVRLWDLRKL 427
Query: 608 K 610
K
Sbjct: 428 K 428
Score = 54.0 bits (124), Expect = 1e-07
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 5/178 (2%)
Frame = +2
Query: 254 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 433
F D++ S D +G D T L+D +G+ H+K V S+ F D +++ S
Sbjct: 226 FSMDILHSKD--VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTAS 283
Query: 434 RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA-NPIIVSCGWDRTVKVWHLTN-- 604
DKT+++W + YT + D + VR HA N VS D T + L++
Sbjct: 284 SDKTVRIWGCSEDGNYTSRHT-LKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGL 342
Query: 605 CKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIIT 772
C ++ + T PDG + +G +WD+ ++ HN IT
Sbjct: 343 CLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEIT 400
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 65.7 bits (153), Expect = 3e-11
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Frame = +2
Query: 353 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD---DGHSDWVSCV 523
+R ++ H K V SVA++ + ++ SGS D+T ++WN +D GH+D V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 524 RFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDM 703
+ P H++ + + G D++V++W + K + SG +T PDG+ A G +D
Sbjct: 73 CWDPKHSDLVATASG-DKSVRLWDARSGKC-TQQVELSGENINITYKPDGTHVAVGNRDD 130
Query: 704 KAMLWDLNDGKHLHTLDHN 760
+ + D+ K LH N
Sbjct: 131 ELTILDVRKFKPLHRRKFN 149
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSVAFSVD 409
GH + V +S+G SGS D+T R+W++ ++ + HT V + +
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 410 NRQIV-SGSRDKTIKLWNTLA-ECKYTIQDDGHS 505
+ +V + S DK+++LW+ + +C ++ G +
Sbjct: 78 HSDLVATASGDKSVRLWDARSGKCTQQVELSGEN 111
Score = 39.1 bits (87), Expect = 0.003
Identities = 41/220 (18%), Positives = 89/220 (40%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L+GH V Q+ +PK+ D++ ++S DK++ +W + Q L G + ++
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDA---RSGKCTQQVELSGEN---INIT 115
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
DG + G+ D L + D+ K R +V +A+++ + T++
Sbjct: 116 YKPDGTHVAVGNRDDELTILDVRKFKPLHR-RKFNYEVNEIAWNMPGDFFFLTTGLGTVE 174
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 631
+ + K H+ C+ P + S D V +W +++
Sbjct: 175 VL-SYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSA--DSLVSLWDISDMLCLRTFTK 231
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
+ T++ + G AS +D+ + ++ G+ +H +
Sbjct: 232 LEWPVRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQI 271
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 65.7 bits (153), Expect = 3e-11
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
H +S + L+ D SGSWDKTL++W L+ K E H V +V D+ +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVF 302
Query: 425 SGSRDKTIKLWNTLA---ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+GS D T+K+W E K+ + + + N + ++ D TV W
Sbjct: 303 TGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE 362
Query: 596 LTNCKLKINHLG--HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN-DGKH 739
+ + H G H + + ++ GSL SGG D +W N DG H
Sbjct: 363 R---QKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSH 410
Score = 41.5 bits (93), Expect = 6e-04
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
++ S S DKTL VW+L+ + + + H ++ VV D + +GS D TL++
Sbjct: 259 LLYSGSWDKTLKVWRLSDSK-----CLESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKV 312
Query: 329 WDL-AAGKTTRR-----FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 490
W GK + V ++A ++ + + GS D T+ W +
Sbjct: 313 WKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLTHKGT 372
Query: 491 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
GH V C+ A +++S G D+ + VW
Sbjct: 373 IHGHRMAVLCLA----TAGSLLLSGGADKNICVW 402
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 64.9 bits (151), Expect = 6e-11
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 4/216 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T+ GH V +A + ++ S SRDK+++ + E++ +L GH I +
Sbjct: 246 TMEGHRLRVGALAWSSS---VLSSGSRDKSILQRDIRTQEDHVS----KLKGHKSEICGL 298
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 439
SSD SG D L +W+ + + RF +H V ++A+S + +++ G+ D
Sbjct: 299 KWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTAD 358
Query: 440 KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT-VKVWHLTNCKLK 616
+ I+ WNT D + V + +S N N ++ + G+ + + VW
Sbjct: 359 RCIRFWNTTTNTHLNCVDT--NSQVCNLVWSKN-VNELVSTHGYSQNQIIVWKYPTMSKL 415
Query: 617 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
GHS + + VSPDG +G D W++
Sbjct: 416 ATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 54.0 bits (124), Expect = 1e-07
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Frame = +2
Query: 284 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 463
G + G+ T+++WD+ K R E H V ++A+S + + SGSRDK+I +
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDI 278
Query: 464 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY 643
+ + + GH + +++S + N + S G D + VW+ + + + H+
Sbjct: 279 RTQEDHVSKLKGHKSEICGLKWSSD--NRELASGGNDNKLFVWNQHSTQPVLRFCEHAAA 336
Query: 644 LNTVTVSPDG-SLCASGG--KDMKAMLWDLNDGKHLHTLDHN 760
+ + SP L ASGG D W+ HL+ +D N
Sbjct: 337 VKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTN 378
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 ISDVVLSSDGNYALS--GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 430
+ ++V S + N +S G + +W H+ VL +A S D + IV+G
Sbjct: 381 VCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTG 440
Query: 431 SRDKTIKLWNTLAECK 478
+ D+T++ WN K
Sbjct: 441 AGDETLRFWNVFPSPK 456
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
KRL GH + + +L G Y ++GS D+ +++W + H D+ +A S +
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPI-IVSCGWDRTVK 586
N I S S D I++W ++ GH+ V+ + FSP +P ++S D T +
Sbjct: 299 NIFIASASNDCVIRVWRLPDGLPVSVL-RGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCR 357
Query: 587 VW 592
+W
Sbjct: 358 IW 359
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH + V C + + +++ DR VKVW + + GH G + + VS +
Sbjct: 243 GHRNAVYCAIL--DRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 677 LCASGGKDMKAMLWDLNDGKHLHTL-DHNDIIT 772
AS D +W L DG + L H +T
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVT 333
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 190
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 31.5 bits (68), Expect = 0.64
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +2
Query: 344 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 523
G +R + V +A+S+DNR +++ D I +WN ++ GH+ S
Sbjct: 534 GGPRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNA-SDGSLVHSLTGHT--ASTY 590
Query: 524 RFSPNHANP-IIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGS 676
+ NP I +S G+D VW + ++I + H ++ SPDG+
Sbjct: 591 VMDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDG-KFSPDGT 642
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Frame = +2
Query: 218 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 397
G P++R+ ++ + S D + L+ D + +W+ + G HT +
Sbjct: 534 GGPRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMD 593
Query: 398 FSVDNRQIV--SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 556
N +I +G KTI +W+ I D H V +FSP+ + I+
Sbjct: 594 VHPFNPRIAMSAGYDGKTI-VWDIWEGIPIQIYDISHYKLVD-GKFSPDGTSIIL 646
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 64.1 bits (149), Expect = 1e-10
Identities = 37/119 (31%), Positives = 59/119 (49%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 280
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 457
G +S S DK LR+WDL + H +V SV + R +V+GS D+ ++ +
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY 217
Score = 60.5 bits (140), Expect = 1e-09
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 1/156 (0%)
Frame = +2
Query: 266 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
V +S D + D T++++ + + K H V+ + S D IV+GS+DK
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKN 605
Query: 446 IKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 622
+K+W +C +I H D V V+F N + S G DR VK W + +
Sbjct: 606 LKIWGLDFGDCHKSI--FAHGDSVMGVKFVRN--THYLFSIGKDRLVKYWDADKFEHLLT 661
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
GH + + +S G +G D WD ++
Sbjct: 662 LEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSE 697
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/119 (26%), Positives = 60/119 (50%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
LYGH + + +SSDG ++GS DK L++W L G + H V+ V F +
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTH 637
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
+ S +D+ +K W+ + ++ + +GH + C+ S + +V+ DR+++ W
Sbjct: 638 YLFSIGKDRLVKYWDA-DKFEHLLTLEGHHAEIWCLAIS--NRGDFLVTGSHDRSMRRW 693
Score = 48.8 bits (111), Expect = 4e-06
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 11/171 (6%)
Frame = +2
Query: 290 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW---- 457
Y + G+ L + D+ + + H + S+ ++ V+ S D +K W
Sbjct: 459 YGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQV 518
Query: 458 ---NTLAECKYTIQDDGH---SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI 619
+ A K T+ + +D V V SP+ A I V+ D TVKV+++ + K +
Sbjct: 519 KQKSGKATKKLTVSNVKSMKMNDDVLAVAISPD-AKHIAVAL-LDSTVKVFYMDSLKFYL 576
Query: 620 NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLDHNDII 769
+ GH + + +S DG L +G +D +W L+ G H H D +
Sbjct: 577 SLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSV 627
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/135 (24%), Positives = 64/135 (47%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
++LK +L GH V I + ++I++ S+DK L +W L ++G K ++ H
Sbjct: 570 DSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGL-----DFGDCHKSIFAH 623
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
+ V + +Y S D+ ++ WD + E H ++ +A S +V+
Sbjct: 624 GDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVT 683
Query: 428 GSRDKTIKLWNTLAE 472
GS D++++ W+ E
Sbjct: 684 GSHDRSMRRWDRSEE 698
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/125 (28%), Positives = 56/125 (44%)
Frame = +2
Query: 380 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIV 559
DVL+VA S D + I D T+K++ + K+ + GH V C+ S + +IV
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVFY-MDSLKFYLSLYGHKLPVMCIDISSD--GELIV 598
Query: 560 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 739
+ D+ +K+W L + H + V + S GKD WD + +H
Sbjct: 599 TGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEH 658
Query: 740 LHTLD 754
L TL+
Sbjct: 659 LLTLE 663
Score = 45.6 bits (103), Expect = 4e-05
Identities = 33/148 (22%), Positives = 63/148 (42%)
Frame = +2
Query: 65 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 244
S+TL + G + VT IA++ ++ D ++ +W + G +
Sbjct: 52 SKTLTPSSSRGGPSLAVTSIASSAS--SLVAVGYADGSIRIW-----DTEKGTCEVNFNS 104
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
H ++ + + G+ SGS D + LWD+ R H V + F +++V
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 425 SGSRDKTIKLWNTLAECKYTIQDDGHSD 508
S S+DK +++W+ + I HS+
Sbjct: 165 SSSKDKFLRVWDLETQHCMQIVSGHHSE 192
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Frame = +2
Query: 389 SVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 565
++A+ + +++ + +K + +W+ C T+ S S + +V+
Sbjct: 23 NIAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAV 81
Query: 566 GW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 742
G+ D ++++W ++N H G + + + GS+ ASG KD +LWD+ L
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGL 141
Query: 743 HTL-DHNDIIT 772
L H D +T
Sbjct: 142 FRLRGHRDQVT 152
Score = 38.7 bits (86), Expect = 0.004
Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 7/162 (4%)
Frame = +2
Query: 260 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD------VLSVAFSVDNRQI 421
S++ S G Y L+ + +K + +W + G ++ + V S+A S +
Sbjct: 22 SNIAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVA 80
Query: 422 VSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
V G D +I++W+T C+ + + H V+ +R+ N ++ S D + +W +
Sbjct: 81 V-GYADGSIRIWDTEKGTCE--VNFNSHKGAVTALRY--NKVGSMLASGSKDNDIILWDV 135
Query: 599 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
GH + + G S KD +WDL
Sbjct: 136 VGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDL 177
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 617 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
I H GH + +VT+S D +L S + +W+ + G L T+D
Sbjct: 400 IEHQGHRSDVRSVTLSEDNTLLMSTSHS-EVKIWNPSTGSCLRTID 444
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 62.9 bits (146), Expect = 2e-10
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 18/233 (7%)
Frame = +2
Query: 92 LRGHNGWVTQIATNP--KYPD----MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 253
L GH V +A NP + D ++ S S D T+ +W+ + ++ H+
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 254 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVS 427
+ S G + S+D T +W + E H +V SV+++ + +
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLAT 135
Query: 428 GSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 601
SRDK++ +W L +Y GH+ V V++ P ++ SC +D T+KVW
Sbjct: 136 CSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP--TMDVLFSCSYDNTIKVWWSE 193
Query: 602 N------C--KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 736
+ C L ++ GHS + +++ + G + D+ +W + K
Sbjct: 194 DDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAK 246
Score = 54.0 bits (124), Expect = 1e-07
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK---RLYGHSHFISDVV 271
H V A +P ++ ++S D T +WK NYG + L GH + + V
Sbjct: 73 HTRTVRSCAWSPS-GQLLATASFDGTTGIWK------NYGSEFECISTLEGHENEVKSVS 125
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 442
++ G+ + S DK++ +W++ G HT+DV V + + S S D
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDN 185
Query: 443 TIKLW-----NTLAECKYTI--QDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 601
TIK+W + +C T+ ++GHS V + F N A +V+C D T+K+W
Sbjct: 186 TIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISF--NAAGDKMVTCSDDLTLKIWGTD 243
Query: 602 NCKLK 616
K++
Sbjct: 244 IAKMQ 248
Score = 53.2 bits (122), Expect = 2e-07
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 23/192 (11%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ---KRLYGHSHFIS 262
L GH V + +P D++ S S D T+ VW D+ Y Q + GHS +
Sbjct: 159 LTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 263 DVVLSSDGNYALSGSWDKTLRLW--DLAAGKTTRRFED----------HTKDVLSVAFSV 406
+ ++ G+ ++ S D TL++W D+A ++ + H + + S +S
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSR 277
Query: 407 DNRQIVSGSRDKTIKLW-----NTLAECKYTI---QDDGHSDWVSCVRFSPNHANPIIVS 562
D+ I SG+ D I+L+ +++ Y + ++ H + V+ V++SP N ++ S
Sbjct: 278 DDI-IASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLAS 336
Query: 563 CGWDRTVKVWHL 598
D VK+W L
Sbjct: 337 ASDDGMVKIWQL 348
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 62.9 bits (146), Expect = 2e-10
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT-KDVLSVAFSVDNRQI 421
H++ ++ + +D + LS S D T+R WD K + + T + +S+ +
Sbjct: 390 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVV 449
Query: 422 VSGSRDK-TIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+G+ D I +W+ + K + GH V + FSP ++ S WD TV++W
Sbjct: 450 CAGTLDSFEIFVWSKKTGQIKDILS--GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWD 505
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
+ K + H+ + TV PDG AS D + WD +G ++T++
Sbjct: 506 VFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 62.1 bits (144), Expect = 4e-10
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 4/181 (2%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 422 VSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR-TVKVWH 595
+S S D T++ W+ Y T +VS + + + ++ + D + VW
Sbjct: 407 LSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVS---LTADPSGDVVCAGTLDSFEIFVWS 463
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLDHN-DII 769
++K GH ++ + SP L AS D LWD+ K + T HN D++
Sbjct: 464 KKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVL 523
Query: 770 T 772
T
Sbjct: 524 T 524
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 416 QIVSGSRDKTIKLWNTL-AECKYTIQ 490
Q+ S + D I W+T+ YTI+
Sbjct: 533 QLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/99 (24%), Positives = 42/99 (42%)
Frame = +2
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 631
+W+ E Y ++ GH V+CV +SP+ + ++ + D VKVW++ + I
Sbjct: 333 VWDWRTET-YILKQQGHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTE 389
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 748
H+ + + D S D WD K+ T
Sbjct: 390 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKT 428
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 587 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHND 763
VW + GH +N VT SPD L A+G D K +W++ G T +H +
Sbjct: 333 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 392
Query: 764 IIT 772
+T
Sbjct: 393 AVT 395
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 62.9 bits (146), Expect = 2e-10
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT-KDVLSVAFSVDNRQI 421
H++ ++ + +D + LS S D T+R WD K + + T + +S+ +
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVV 489
Query: 422 VSGSRDK-TIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+G+ D I +W+ + K + GH V + FSP ++ S WD TV++W
Sbjct: 490 CAGTLDSFEIFVWSKKTGQIKDILS--GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWD 545
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
+ K + H+ + TV PDG AS D + WD +G ++T++
Sbjct: 546 VFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 62.1 bits (144), Expect = 4e-10
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 4/181 (2%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 422 VSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR-TVKVWH 595
+S S D T++ W+ Y T +VS + + + ++ + D + VW
Sbjct: 447 LSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVS---LTADPSGDVVCAGTLDSFEIFVWS 503
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLDHN-DII 769
++K GH ++ + SP L AS D LWD+ K + T HN D++
Sbjct: 504 KKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVL 563
Query: 770 T 772
T
Sbjct: 564 T 564
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 416 QIVSGSRDKTIKLWNTL-AECKYTIQ 490
Q+ S + D I W+T+ YTI+
Sbjct: 573 QLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/99 (24%), Positives = 42/99 (42%)
Frame = +2
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 631
+W+ E Y ++ GH V+CV +SP+ + ++ + D VKVW++ + I
Sbjct: 373 VWDWRTET-YILKQQGHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTE 429
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 748
H+ + + D S D WD K+ T
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKT 468
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 587 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHND 763
VW + GH +N VT SPD L A+G D K +W++ G T +H +
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 432
Query: 764 IIT 772
+T
Sbjct: 433 AVT 435
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 62.5 bits (145), Expect = 3e-10
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Frame = +2
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 463
N+ S ++ + +WD+ ++ +E+H K SV FS + +VSGS D +K+W T
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 464 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSG 640
E I D ++ + CV+++P +N I V D + + L N ++ GH
Sbjct: 494 RQEAS-VINIDMKAN-ICCVKYNPGSSNYIAVGSA-DHHIHYYDLRNISQPLHVFSGHKK 550
Query: 641 YLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 748
++ V + L AS D LWD+ D + T
Sbjct: 551 AVSYVKFLSNNEL-ASASTDSTLRLWDVKDNLPVRT 585
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +2
Query: 203 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 382
D N P GH +S V S+ A S S D TLRLWD+ R F HT +
Sbjct: 534 DLRNISQPLHVFSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHTNE 592
Query: 383 VLSVAFSVDNRQIVSGSRDKTIKLWN 460
V +V++ + GS + +++
Sbjct: 593 KNFVGLTVNSEYLACGSETNEVYVYH 618
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 61.7 bits (143), Expect = 5e-10
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
Frame = +2
Query: 92 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 250
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 251 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 430
+ V GN S SWD T+ LW+ + T + SV SV R+ G
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWNT---------NESTSEGESV--SVKKRK---G 251
Query: 431 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 610
+ + +E + GH+ VS V + P H +I S WD +V+ W + K
Sbjct: 252 NNQAE----ESQSEGEAVTSLVGHTQCVSSVVW-PEH--DVIYSSSWDHSVRRWDVETGK 304
Query: 611 LKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWD 721
+N L LNTV V + S L A+GG D +WD
Sbjct: 305 DSLN-LFCGKALNTVDVGGESSALIAAGGSDPILRVWD 341
Score = 51.2 bits (117), Expect = 7e-07
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 25/210 (11%)
Frame = +2
Query: 44 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 199
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 200 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 337
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 338 AAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--AECKYTIQDDGHSD 508
GK + F + + V + I +G D +++W+ Q HS
Sbjct: 301 ETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSS 359
Query: 509 WVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
W+S ++ + ++ S +D + +W L
Sbjct: 360 WISACKWHKSSWFHLL-SASYDGKIMLWDL 388
Score = 37.5 bits (83), Expect = 0.010
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +2
Query: 305 SWDKTLRLWDLAAGKTTRRFEDHT--KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 478
S ++TL + + A T R+ E+ + D +S R I++G D ++W++ C
Sbjct: 85 SAERTLEIEYIRA-VTPRKEEEPSLHDDWVSAVNGSSPRFILTGCYDGLGRVWSSAGSCS 143
Query: 479 YTIQDDGHSDWVSCVRF-SPNHANPIIVS-CGWDRTVKVWHL-------TNCKLKINHL- 628
+ ++ GHS +S V + N A + V+ DRT++++ + K++ +
Sbjct: 144 HILE--GHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKIL 201
Query: 629 -GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
GH + +V+ G++ S D LW+ N+
Sbjct: 202 RGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNE 236
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 61.7 bits (143), Expect = 5e-10
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
Frame = +2
Query: 92 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 250
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 251 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 430
+ V GN S SWD T+ LW+ + T + SV SV R+ G
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWNT---------NESTSEGESV--SVKKRK---G 251
Query: 431 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 610
+ + +E + GH+ VS V + P H +I S WD +V+ W + K
Sbjct: 252 NNQAE----ESQSEGEAVTSLVGHTQCVSSVVW-PEH--DVIYSSSWDHSVRRWDVETGK 304
Query: 611 LKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWD 721
+N L LNTV V + S L A+GG D +WD
Sbjct: 305 DSLN-LFCGKALNTVDVGGESSALIAAGGSDPILRVWD 341
Score = 51.2 bits (117), Expect = 7e-07
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 25/210 (11%)
Frame = +2
Query: 44 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 199
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 200 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 337
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 338 AAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--AECKYTIQDDGHSD 508
GK + F + + V + I +G D +++W+ Q HS
Sbjct: 301 ETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSS 359
Query: 509 WVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
W+S ++ + ++ S +D + +W L
Sbjct: 360 WISACKWHKSSWFHLL-SASYDGKIMLWDL 388
Score = 37.5 bits (83), Expect = 0.010
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +2
Query: 305 SWDKTLRLWDLAAGKTTRRFEDHT--KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 478
S ++TL + + A T R+ E+ + D +S R I++G D ++W++ C
Sbjct: 85 SAERTLEIEYIRA-VTPRKEEEPSLHDDWVSAVNGSSPRFILTGCYDGLGRVWSSAGSCS 143
Query: 479 YTIQDDGHSDWVSCVRF-SPNHANPIIVS-CGWDRTVKVWHL-------TNCKLKINHL- 628
+ ++ GHS +S V + N A + V+ DRT++++ + K++ +
Sbjct: 144 HILE--GHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKIL 201
Query: 629 -GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
GH + +V+ G++ S D LW+ N+
Sbjct: 202 RGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNE 236
Score = 34.3 bits (75), Expect = 0.091
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL-SSDGNYALSGSWDKTLR 325
+I + D L VW + + P + HS +IS S + LS S+D +
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 469
LWDL + H VLS + +VSG D +++ + +A
Sbjct: 385 LWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRISSGIA 431
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 61.7 bits (143), Expect = 5e-10
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 19/151 (12%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-------------------RFE 367
H + V LS D + S S D T+ WD+++GKT + R +
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNK 219
Query: 368 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 547
+H+++ L++A S D R + +G D+ + +W+ ++ GH + VSC+ F +
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTR-EHVQAFPGHRNTVSCLCF--RYGT 276
Query: 548 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSG 640
+ S +DRTVKVW++ + + GH G
Sbjct: 277 SELYSGSFDRTVKVWNVEDKAFITENHGHQG 307
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIP--QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 325
+ S DK +W ++G+ + R HS + +SSDG Y +G D+ +
Sbjct: 190 VSSGKTDK--YIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVH 247
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 502
+WD+ + + F H V + F ++ SGS D+T+K+WN + + + ++ GH
Sbjct: 248 IWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN-VEDKAFITENHGH 305
Score = 34.7 bits (76), Expect = 0.069
Identities = 28/123 (22%), Positives = 54/123 (43%)
Frame = +2
Query: 170 DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 349
D+ + +W + E+ P GH + +S + + SGS+D+T+++W++
Sbjct: 243 DRHVHIWDVRTREHVQAFP-----GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKA 297
Query: 350 TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRF 529
H ++L++ R + G RD+T+ L++ + E I S SC
Sbjct: 298 FITENHGHQGEILAIDALRKERALTVG-RDRTM-LYHKVPESTRMIYRAPASSLESCCFI 355
Query: 530 SPN 538
S N
Sbjct: 356 SDN 358
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 742
HS + VS DG A+GG D +WD+ +H+
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHV 257
Score = 28.3 bits (60), Expect = 6.0
Identities = 30/119 (25%), Positives = 52/119 (43%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
+ S S D+T+ VW + E+ I + +GH I + + AL+ D+T+ L+
Sbjct: 279 LYSGSFDRTVKVWNV---EDKAFITEN--HGHQGEIL-AIDALRKERALTVGRDRTM-LY 331
Query: 332 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 508
T + + S F DN + +SGS + T+ LW L + + + H D
Sbjct: 332 HKVPESTRMIYRAPASSLESCCFISDN-EYLSGSDNGTVALWGMLKKKPVFVFKNAHQD 389
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 61.7 bits (143), Expect = 5e-10
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGI--PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 322
M+++++ T VW+L R + P +L H+ I +LS Y + S DKT+
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 323 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 502
++W++ K + H + V FSVD +V+ S D T +LW+ A + + H
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
Query: 503 SDWVSC 520
V C
Sbjct: 296 KATVCC 301
Score = 61.3 bits (142), Expect = 7e-10
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 7/202 (3%)
Frame = +2
Query: 158 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 337
S S D T+ +W L G ++ Y ++ VVL + +SG + +R+WDL
Sbjct: 95 SGSEDGTVKIWDLRAP----GCQKE--YESVAAVNTVVLHPNQTELISGDQNGNIRVWDL 148
Query: 338 AAGKTTRRFEDHTKD-VLSVAFSVDNRQIVSGSRDKTIKLWN------TLAECKYTIQDD 496
A + V S+ D +V+ + T +W T+ E + +
Sbjct: 149 RANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQ 208
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
H+ + SP AN + + D+TVK+W++ KL+ GH ++ S DG
Sbjct: 209 AHNGHILKCLLSP--ANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 677 LCASGGKDMKAMLWDLNDGKHL 742
+ DM A LW + GK +
Sbjct: 267 FLVTASSDMTARLWSMPAGKEV 288
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/102 (31%), Positives = 55/102 (53%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 397
S DG + ++ S D T RLW + AGK + ++ H K + A
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
Score = 52.8 bits (121), Expect = 2e-07
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 6/208 (2%)
Frame = +2
Query: 143 PDMILSS-SRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 319
P +IL++ S D T+ W+ Y Q Y SH ++ + ++ D +Y L+ + +
Sbjct: 4 PSVILATASYDHTIRFWE-AETGRCYRTIQ---YPDSH-VNRLEITPDKHY-LAAACNPH 57
Query: 320 LRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQ 490
+RL+D+ + + ++ HT +V++V F D + + SGS D T+K+W+ A C+ +
Sbjct: 58 IRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYE 117
Query: 491 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL--TNCKLKINHLGHSGYLNTVTVS 664
V+ V PN ++S + ++VW L +C ++ + + ++TV
Sbjct: 118 SVAA---VNTVVLHPNQTE--LISGDQNGNIRVWDLRANSCSCELVPEVDTA-VRSLTVM 171
Query: 665 PDGSLCASGGKDMKAMLWDLNDGKHLHT 748
DG++ + +W L GK T
Sbjct: 172 WDGTMVVAANNRGTCYVWRLLRGKQTMT 199
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
K+L GH + + + G Y ++GS D+ +++W + H D+ +A S +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPI-IVSCGWDRTVK 586
N + S S D I++W ++ GH+ V+ + FSP A+ ++S D T +
Sbjct: 359 NALVASASNDFVIRVWRLPDGMPISVL-RGHTGAVTAIAFSPRQASVYQLLSSSDDGTCR 417
Query: 587 VW 592
+W
Sbjct: 418 IW 419
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH + V C F + + +++ DR VK+W + + GH G + + VS + +
Sbjct: 303 GHRNAVYCAIF--DRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 677 LCASGGKDMKAMLWDLNDGKHLHTL-DHNDIIT 772
L AS D +W L DG + L H +T
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVT 393
Score = 33.1 bits (72), Expect = 0.21
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWK------LTR----DENNYGIPQKR 235
LRGH G VT IA +P+ + +LSSS D T +W L R ++
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTS 444
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
SH I +++G ++GS D R+W
Sbjct: 445 NASQSHQILCCAYNANGTIFVTGSSDSNARVW 476
Score = 31.9 bits (69), Expect = 0.49
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +2
Query: 344 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 523
G +RF + V + +S+DNR +++ D I +WN A+ GHS+ S
Sbjct: 587 GGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMDCRICVWNA-ADGSLVHCLTGHSE--SSY 643
Query: 524 RFSPNHANP-IIVSCGWDRTVKVWHL-TNCKLKINHLG 631
+ NP I +S G+D +W + +K+ +G
Sbjct: 644 VLDVHPFNPRIAMSAGYDGKTIIWDIWEGIPIKVYEIG 681
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 60.9 bits (141), Expect = 9e-10
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = +2
Query: 377 KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 556
K VLSVA+S + +++ GS D TI +++ + K Q +GH+ V + FSP +P +
Sbjct: 159 KFVLSVAWSPNGKRLACGSMDGTICVFD-VDRSKLLHQLEGHNMPVRSLVFSP--VDPRV 215
Query: 557 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 733
+ G D H K + + GH+ ++ +V SPDG A+G D LWDL
Sbjct: 216 LFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMR 275
Query: 734 KHLHTL-DHND 763
+ T+ +HND
Sbjct: 276 AAIQTMSNHND 286
Score = 51.6 bits (118), Expect = 6e-07
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
KL L GHN V + +P P ++ S S D + + + G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF------SVDNRQ 418
+ V S DG +GS D+T+RLWDL + +H V SVAF V +
Sbjct: 246 VLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGR 305
Query: 419 IVSGSRDKTIKLWN 460
+ S S DK++ L++
Sbjct: 306 LASVSDDKSVSLYD 319
Score = 41.5 bits (93), Expect = 6e-04
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Frame = +2
Query: 116 TQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA 295
T + P ++L+ S D+T+ +W+ DE + + GHS ++ + G A
Sbjct: 21 TWVPATEDRPALLLTGSLDETVKLWR--PDELDL---VRTNTGHSLGVAALAAHPSGIIA 75
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNT--- 463
S S D +R++D+ T E +V + F + V+G ++KLW+T
Sbjct: 76 ASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASW 135
Query: 464 -LAECKYTIQDDG--HSDWVSCVRFSPNHA---NPIIVSCG-WDRTVKVWHLTNCKLKIN 622
L + D SD S +F + A N ++CG D T+ V+ + KL
Sbjct: 136 RLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQ 195
Query: 623 HLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHL 742
GH+ + ++ SP D + SG D + D +GK L
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDA-EGKTL 235
Score = 35.9 bits (79), Expect = 0.030
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +2
Query: 419 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
+++GS D+T+KLW E + GHS V+ + P + I S D V+V+ +
Sbjct: 33 LLTGSLDETVKLWRP-DELDLVRTNTGHSLGVAALAAHP--SGIIAASSSIDSFVRVFDV 89
Query: 599 -TNCKLKINHLGHSGYLNTVTVSPDGSLCA-SGGKDMKAMLWDLNDGKHLHTL 751
TN + + S + P G++ A +GG LWD + + TL
Sbjct: 90 DTNATIAVLEAPPSEVWG-MQFEPKGTILAVAGGSSASVKLWDTASWRLISTL 141
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +2
Query: 491 DDGHSDWVSCVRFSP-NHANPIIVSCG-WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 664
++ H D V + P P ++ G D TVK+W L + GHS + +
Sbjct: 10 ENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAH 69
Query: 665 PDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
P G + AS D ++D++ + L+
Sbjct: 70 PSGIIAASSSIDSFVRVFDVDTNATIAVLE 99
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 65 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 196
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 60.9 bits (141), Expect = 9e-10
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = +2
Query: 95 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 274
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 59.7 bits (138), Expect = 2e-09
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 3/230 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T H WV A + ++S S D T+ W D G+ + L HS +++ +
Sbjct: 79 TFESHVDWVNDAALAGE--STLVSCSSDTTVKTWDGLSD----GVCTRTLRQHSDYVTCL 132
Query: 269 -VLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 442
V + + N SG + +WD+ AA + D +D S + + +
Sbjct: 133 AVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSN 192
Query: 443 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 622
I + ++ + GH + S + N ++VS G ++ ++VW +
Sbjct: 193 NISVQSSPSHGYTPTIAKGHKE--SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMK 250
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDII 769
GH+ + + + G C SG D LWDL + LHT H D +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSV 300
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Frame = +2
Query: 380 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 556
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 557 VSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLWDL 724
VSC D TVK W L++ HS Y+ + V + + ++ ASGG + +WD+
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
GH + + ++ G +SG +K LR+WD G + + HT +V + R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 422 VSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNH 541
+SGS D I+LW+ C +T S W S +H
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSH 311
Score = 42.7 bits (96), Expect = 3e-04
Identities = 44/212 (20%), Positives = 88/212 (41%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
TLR H+ +VT +A K +++ S + +W + + P S ++
Sbjct: 121 TLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANG 180
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
++S GS + + G T + H + V ++A + +VSG +K +
Sbjct: 181 PVTS---LRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVL 237
Query: 449 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 628
++W+ K +++ GH+D V + + +S D +++W L + +
Sbjct: 238 RVWDPRTGSK-SMKLRGHTDNVRVLLL--DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA 294
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
H+ + + +P S SGG+D L DL
Sbjct: 295 VHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 60.9 bits (141), Expect = 9e-10
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = +2
Query: 95 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 274
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 59.7 bits (138), Expect = 2e-09
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 3/230 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T H WV A + ++S S D T+ W D G+ + L HS +++ +
Sbjct: 79 TFESHVDWVNDAALAGE--STLVSCSSDTTVKTWDGLSD----GVCTRTLRQHSDYVTCL 132
Query: 269 -VLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 442
V + + N SG + +WD+ AA + D +D S + + +
Sbjct: 133 AVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSN 192
Query: 443 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 622
I + ++ + GH + S + N ++VS G ++ ++VW +
Sbjct: 193 NISVQSSPSHGYTPTIAKGHKE--SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMK 250
Query: 623 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDII 769
GH+ + + + G C SG D LWDL + LHT H D +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSV 300
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Frame = +2
Query: 380 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 556
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 557 VSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLWDL 724
VSC D TVK W L++ HS Y+ + V + + ++ ASGG + +WD+
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
GH + + ++ G +SG +K LR+WD G + + HT +V + R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 422 VSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNH 541
+SGS D I+LW+ C +T S W S +H
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSH 311
Score = 42.7 bits (96), Expect = 3e-04
Identities = 44/212 (20%), Positives = 88/212 (41%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
TLR H+ +VT +A K +++ S + +W + + P S ++
Sbjct: 121 TLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANG 180
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
++S GS + + G T + H + V ++A + +VSG +K +
Sbjct: 181 PVTS---LRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVL 237
Query: 449 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 628
++W+ K +++ GH+D V + + +S D +++W L + +
Sbjct: 238 RVWDPRTGSK-SMKLRGHTDNVRVLLL--DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA 294
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
H+ + + +P S SGG+D L DL
Sbjct: 295 VHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 60.1 bits (139), Expect = 2e-09
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Frame = +2
Query: 98 GHNGW-VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 274
GH GW V + +P +++S +D+ + +W TR G L+GH + + V
Sbjct: 266 GH-GWDVKSVDWHPT-KSLLVSGGKDQLVKLWD-TRS----GRELCSLHGHKNIVLSVKW 318
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIK 451
+ +GN+ L+ S D+ ++L+D+ K + F HTKDV S+A+ + + VSGS D +I
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSIC 378
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
W E + H + V + + P ++ S D T K W
Sbjct: 379 HWIVGHENPQIEIPNAHDNSVWDLAWHP--IGYLLCSGSNDHTTKFW 423
Score = 56.4 bits (130), Expect = 2e-08
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 21/192 (10%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
I+ V+ + G ++GS LW+ + + H + + S+ +S + +VSG
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDD 185
Query: 437 DKTIKLW-NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNC-- 607
T+K W N + K H + + + F SC D TVKVW T C
Sbjct: 186 GGTLKYWQNNMNNVK--ANKTAHKESIRDLSFCKTDLK--FCSCSDDTTVKVWDFTKCVD 241
Query: 608 -----------KLKIN------HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 736
++I + GH + +V P SL SGGKD LWD G+
Sbjct: 242 ESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGR 301
Query: 737 HLHTL-DHNDII 769
L +L H +I+
Sbjct: 302 ELCSLHGHKNIV 313
Score = 48.4 bits (110), Expect = 5e-06
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 18/189 (9%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L H I +V S + NY +SG TL+ W H + + ++F +
Sbjct: 161 LQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDL 220
Query: 416 QIVSGSRDKTIKLWN----------------TLAECKYTIQ--DDGHSDWVSCVRFSPNH 541
+ S S D T+K+W+ + E ++ + + GH V V + P
Sbjct: 221 KFCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTK 280
Query: 542 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
+ ++VS G D+ VK+W + + + GH + +V + +G+ + KD L+D
Sbjct: 281 S--LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYD 338
Query: 722 LNDGKHLHT 748
+ K L +
Sbjct: 339 IRTMKELQS 347
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 250
T+K + RGH VT +A +P + + +S S D ++ W + + IP H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396
Query: 251 HFISDVVLSSDGNYALSGSWDKTLRLW 331
+ + D+ G SGS D T + W
Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 60.1 bits (139), Expect = 2e-09
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Frame = +2
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN- 460
NY S +D ++LWD+ G+ F +H K SV FS ++ SGS D ++KLWN
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNI 826
Query: 461 TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSG 640
C TI++ + V CV+FSP ++ + RT + L N + L SG
Sbjct: 827 NERNCLGTIRNIAN---VCCVQFSPQSSHLLAFGSSDFRTY-CYDLRNLRTPWCIL--SG 880
Query: 641 YLNTVTVSP--DGSLCASGGKDMKAMLWDLNDGKH 739
+ V+ + D + D LWDL H
Sbjct: 881 HNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTH 915
Score = 31.5 bits (68), Expect = 0.64
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Frame = +2
Query: 368 DHTKDVL-SVAFSVDNRQIVSGSRDKTIK------LWNTLAECKYTIQDDGHSDWVSCVR 526
++T +V+ S+ F D + K IK L+N + Y + + +S V
Sbjct: 701 NNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVC 760
Query: 527 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDM 703
++ N+ + S +D VK+W +T + + + H +V S + ASG D
Sbjct: 761 WN-NYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDC 819
Query: 704 KAMLWDLNDGKHLHTL 751
LW++N+ L T+
Sbjct: 820 SVKLWNINERNCLGTI 835
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 59.7 bits (138), Expect = 2e-09
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T+ GH V +A ++ S SRDK+++ + E++ +L GH + +
Sbjct: 289 TMEGHRLRVGALAWGSS---VLSSGSRDKSILQRDIRCQEDHVS----KLAGHKSEVCGL 341
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 439
S D SG D L +W+ + + ++ +HT V ++A+S +++ G+ D
Sbjct: 342 KWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTAD 401
Query: 440 KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT-VKVWHLTNCKLK 616
+ I+ WNT + D V + +S N N ++ + G+ + + VW
Sbjct: 402 RCIRFWNTTTNTHLSSIDT--CSQVCNLAWSKN-VNELVSTHGYSQNQIIVWKYPTMSKI 458
Query: 617 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
GH+ + + VSPDG +G D W++
Sbjct: 459 ATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 51.2 bits (117), Expect = 7e-07
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Frame = +2
Query: 284 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 463
G + G+ +++WD + K TR E H V ++A+ + + SGSRDK+I +
Sbjct: 264 GTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDI 321
Query: 464 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY 643
+ + + GH V +++S + N + S G D + VW+ + + + + H+
Sbjct: 322 RCQEDHVSKLAGHKSEVCGLKWS--YDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAA 379
Query: 644 LNTVTVSPD-GSLCASGG--KDMKAMLWDLNDGKHLHTLD 754
+ + SP L ASGG D W+ HL ++D
Sbjct: 380 VKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSID 419
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 371 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 478
HT VL +A S D + IV+G+ D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 59.7 bits (138), Expect = 2e-09
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = +2
Query: 290 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TL 466
+ S +D R+WDL + F+ H K VLSV FS + + SG D ++W+ +
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRM 203
Query: 467 AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL 646
+ Y I H + VS V++ P + + D V +W + L + +GH +
Sbjct: 204 RKLLYII--PAHVNLVSQVKYEPQE-RYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Query: 647 NTVTVSPDGS 676
++ ++ D S
Sbjct: 261 ASLDIAVDSS 270
Score = 51.6 bits (118), Expect = 6e-07
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 4/175 (2%)
Frame = +2
Query: 239 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF---EDHTKDVLSVAFS-V 406
+G ++ LS DG ++ S +LW++ + T + + H + V V FS V
Sbjct: 60 FGDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVP--QVTNKIVVLKGHKEHVTDVVFSSV 117
Query: 407 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 586
D+ + + S D+T K+W T T + S G+D +
Sbjct: 118 DDECLATASTDRTEKIWKTDGTLLQTFK----------------------ASSGFDSLAR 155
Query: 587 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
VW L + + GH + +V SP+G ASGG+D + +WDL K L+ +
Sbjct: 156 VWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYII 210
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +2
Query: 158 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 337
SS D VW L R N I Q GH + V S +G + SG D R+WDL
Sbjct: 147 SSGFDSLARVWDL-RTARNILIFQ----GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 338 AAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 460
K H V V + R + + S D + +W+
Sbjct: 202 RMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWS 243
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 59.3 bits (137), Expect = 3e-09
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 5/209 (2%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
M+ S+ DK ++W + P+ L H+ I+D+ S + S+DKT+R+
Sbjct: 665 MLASAGHDKKAVLWYTDTMK-----PKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 329 WDL-AAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 502
WD G + R F H+ V S+ F + + I S D I+ W+ + G
Sbjct: 720 WDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGS 779
Query: 503 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLC 682
+ +RF P + S V V + ++ + GH+ +N+V P G
Sbjct: 780 TQ----IRFQPRVGKYLAASSA--NLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFL 833
Query: 683 ASGGKDMKAMLWDL---NDGKHLHTLDHN 760
AS +DM +W L ++G+ +H L N
Sbjct: 834 ASVSEDM-VKVWTLGTGSEGECVHELSCN 861
Score = 58.0 bits (134), Expect = 6e-09
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +2
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
SSDG S DK LW K E+HT + + FS ++ + S DKT+++
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 455 WNTLAECK-YTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 604
W+ A+ K Y+++ GHS V+ + F P + +I SC D ++ W + N
Sbjct: 720 WD--ADNKGYSLRTFMGHSSMVTSLDFHP-IKDDLICSCDNDNEIRYWSINN 768
Score = 50.8 bits (116), Expect = 1e-06
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 4/214 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T GH+ VT + +P D+I S D + W + N G + G S I
Sbjct: 731 TFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSI-----NNGSCTRVYKGGSTQIR-- 783
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
G Y L+ S + + D+ + H + SV + + S S D +
Sbjct: 784 FQPRVGKY-LAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MV 841
Query: 449 KLW----NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 616
K+W + EC + + +G+ + SCV F P + + +++ C +++++W+++ K
Sbjct: 842 KVWTLGTGSEGECVHELSCNGNK-FQSCV-FHPAYPSLLVIGC--YQSLELWNMSENK-T 896
Query: 617 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
+ H G + ++ VS L AS D LW
Sbjct: 897 MTLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 662 SPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIIT 772
S DG + AS G D KA+LW + K TL +H +IT
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMIT 697
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 59.3 bits (137), Expect = 3e-09
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 11/228 (4%)
Frame = +2
Query: 80 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD---ENNYGIPQKRLYGHS 250
L+ ++ G + + +A + I S T+ +W D +N + K L G
Sbjct: 47 LKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEF----KVLAGR- 101
Query: 251 HFISDVVLSSDGNYALS---GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-Q 418
I D+ S+DG ++ G +R + +G F+ H++ VLS A +
Sbjct: 102 --IDDLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFR 159
Query: 419 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
IV+ D + + K+ + HS++V+CVRF+P+ + I VS D+ ++
Sbjct: 160 IVTCGEDFLVNFYEG-PPFKFKLSSREHSNFVNCVRFAPDGSKFITVSS--DKKGIIYDG 216
Query: 599 TNCKLKINHL----GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
C++ + L GH G + V+ SPDG + D A +WD++D
Sbjct: 217 KTCEI-LGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISD 263
Score = 50.4 bits (115), Expect = 1e-06
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 5/195 (2%)
Frame = +2
Query: 194 LTRDENNYGIPQK-RLYGHSHFISDVV-LSSDGNYALSGSWDKTLRLWDLAAGKTTRR-F 364
+T D NN P K +YG + + V S +G + SG T+R+W + F
Sbjct: 39 VTLDLNN---PLKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEF 95
Query: 365 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQD-DGHSDWVSCVRFSPN 538
+ + + +S D +IV+ K L + + + DGHS V P
Sbjct: 96 KVLAGRIDDLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPT 155
Query: 539 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
I V+CG D V + K K++ HS ++N V +PDGS + D K +++
Sbjct: 156 RPFRI-VTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIY 214
Query: 719 DLNDGKHLHTLDHND 763
D + L L +D
Sbjct: 215 DGKTCEILGELSSDD 229
Score = 41.1 bits (92), Expect = 8e-04
Identities = 27/117 (23%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +2
Query: 383 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC-KYTIQDDGHSDWVSCVRFSPNHANPIIV 559
V ++A + D + V G +D + L++ + + H +S +R+SP+ + +
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLS--MFA 507
Query: 560 SCGWDRTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
S +R VW + ++K+ N L HS +N + SP+ ++ A+G D ++++++
Sbjct: 508 SADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVD 564
Score = 30.7 bits (66), Expect = 1.1
Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Frame = +2
Query: 242 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 418
GH +S + VL + +Y LSGS+D + W L G + T++ F+ +
Sbjct: 322 GHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGKL--QRTQNSQIKCFAAHEEE 379
Query: 419 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
IV+ D I + + + + + +P + ++V+ V L
Sbjct: 380 IVTSGYDNKISRISYKDDQCTNEESIDIGNQPKDLSLAPLSPDLLLVTF----ESGVVFL 435
Query: 599 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
+ K+ ++ + + + V+PDG+ GG+D K L+ +N
Sbjct: 436 RDGKV-VSTINLGFIVTALAVTPDGTEAVIGGQDGKLHLYSIN 477
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 58.4 bits (135), Expect = 5e-09
Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 4/216 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T+ GH +A N + ++ S SRD+ ++ + R ++++ +L GH + +
Sbjct: 252 TMGGHQTRTGVLAWNSR---ILSSGSRDRNILQHDI-RVQSDF---VSKLVGHKSEVCGL 304
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 439
S D SG D L +W+ + + + +HT V ++ +S +++ G+ D
Sbjct: 305 KWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTAD 364
Query: 440 KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT-VKVWHLTNCKLK 616
+ I+ WNT + D G V + +S N N I+ + G+ + + +W +
Sbjct: 365 RCIRFWNTTNGNQLNSIDTGSQ--VCNLAWSKN-VNEIVSTHGYSQNQIMLWKYPSMSKV 421
Query: 617 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
GHS + + SPDG +G D W++
Sbjct: 422 ATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 320 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 478
+ LW + H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 58.4 bits (135), Expect = 5e-09
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 6/171 (3%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
H +S + L+ + SGSWDKTL++W L+ K + H + +VA D+ +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLF 306
Query: 425 SGSRDKTIKLWNTLAECKYT--IQDDGHSDWVSCVRFSPNHANPIIVSCG-WDRTVKVWH 595
+GS D T+K+W + K T + + V + +V CG D TV W
Sbjct: 307 TGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFW- 365
Query: 596 LTNCKLKINHLG--HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN-DGKH 739
+ ++H G L + ++ GSL SGG D +W N DG H
Sbjct: 366 --EGQKYLSHGGTLRGHRLAVLCLAAAGSLVLSGGADKNICVWRRNGDGSH 414
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
++ S S DKTL VW+L+ + + + H I+ V D + +GS D TL++
Sbjct: 263 LLYSGSWDKTLKVWRLSDSK-----CLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKV 316
Query: 329 WDL-AAGKTTRRF-----EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 490
W GK T+ F V ++A ++ + GS D T+ W +
Sbjct: 317 WKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGT 376
Query: 491 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
GH V C+ A +++S G D+ + VW
Sbjct: 377 LRGHRLAVLCLA----AAGSLVLSGGADKNICVW 406
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 58.0 bits (134), Expect = 6e-09
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 7/203 (3%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
M+ S S D ++ +W L E +R + ++ VVL + +SG + +R+
Sbjct: 98 MMYSGSEDGSVKIWDLRVREC------QREFRSVSPVNTVVLHPNQTELISGDQNGNIRV 151
Query: 329 WDLAAGKTTRRFEDHT-KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--- 496
WDL A + + S+ D +V+ + T +W +L E + + +
Sbjct: 152 WDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLH 211
Query: 497 ---GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP 667
H+ + SP N + + D+TVK+W+L KL+ GH ++ S
Sbjct: 212 KLQAHNSHILKCLLSPG--NKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSM 269
Query: 668 DGSLCASGGKDMKAMLWDLNDGK 736
DG + D A LW + GK
Sbjct: 270 DGEYLVTASSDTTARLWSMRAGK 292
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/96 (32%), Positives = 50/96 (52%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L+ HN + + +P + +SS DKT+ +W L + + + +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNL----DGFKL-EKVLTGHERWVWDCD 266
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 379
S DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
Score = 45.6 bits (103), Expect = 4e-05
Identities = 44/200 (22%), Positives = 91/200 (45%), Gaps = 8/200 (4%)
Frame = +2
Query: 143 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 322
P + ++S D+T+ +W+ + L+ ++ + L+ + L + + +
Sbjct: 10 PVYLATASHDQTIRLWQARTGRCYFSFRYPDLH-----VNRLELTPEKG-KLVAACNPHI 63
Query: 323 RLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 490
RL+DL + R F HTK+V++V F + SGS D ++K+W+ + EC+ +
Sbjct: 64 RLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFR 123
Query: 491 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW----HLTNCKLKINHLGHSGYLNTVT 658
V+ V PN ++S + ++VW L +C+L + +G + ++T
Sbjct: 124 SVSP---VNTVVLHPNQTE--LISGDQNGNIRVWDLRADLCSCEL-VPEVGTP--IRSLT 175
Query: 659 VSPDGSLCASGGKDMKAMLW 718
V DG++ + +W
Sbjct: 176 VMWDGTMVVAANDRGTCYVW 195
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/125 (26%), Positives = 66/125 (52%)
Frame = +2
Query: 362 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 541
F+ H DVL +A+S ++ ++S S DKT++LWN ++ ++ HSD+V+C++F+P
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNPVD 565
Query: 542 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
+ +S D V+VW + + ++ ++ + + +PDG G ++
Sbjct: 566 -DRYFISGSLDAKVRVWSIPDRQV-VDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYS 623
Query: 722 LNDGK 736
+D K
Sbjct: 624 ASDNK 628
Score = 53.6 bits (123), Expect = 1e-07
Identities = 49/236 (20%), Positives = 109/236 (46%), Gaps = 9/236 (3%)
Frame = +2
Query: 38 SLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 217
++F P S + K + +GH V +A + +LSSS DKT+ +W L+
Sbjct: 491 NIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKS--QHLLSSSMDKTVRLWNLSSQ---- 544
Query: 218 GIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 394
+++ HS +++ + + D Y +SGS D +R+W + + ++ H + V S
Sbjct: 545 --TCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSA 601
Query: 395 AFSVDNRQIVSGSRDKTIKLW----NTLAE-CKYTIQD---DGHSDWVSCVRFSPNHANP 550
++ D + ++ GS + +++ N L + + +Q+ H ++ +F P ++
Sbjct: 602 CYTPDGQGVLVGSYKGSCRMYSASDNKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSE 661
Query: 551 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
++V+ D ++V T+ K+ ++ + +++ DG S +D +W
Sbjct: 662 VLVTSS-DSRIRVVDGTDLVNKLKGFRNTSSQISASITADGKYVVSASEDSHVYIW 716
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +2
Query: 173 KTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV--LSSDGNYALSGSWDKTLRLWDLAAG 346
K+L + + ++ +G+ +K + DV+ S + LS S DKT+RLW+L++
Sbjct: 485 KSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSS- 543
Query: 347 KTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 460
+T + H+ V + F+ VD+R +SGS D +++W+
Sbjct: 544 QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWS 582
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 56.8 bits (131), Expect = 1e-08
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 4/199 (2%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 325
M+ + + +++VWK T D + L GHS ++ + G SGS DKT++
Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIK 281
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 505
+WDL + + HT V S+ ++ ++S S D TIK+W +
Sbjct: 282 MWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTIKVWAYSENGILKVVQTRRQ 339
Query: 506 DWVSCVRFSPNH---ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
+ S S H A PII + TV ++ L + + + + + + T+T+ P G
Sbjct: 340 EQSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLPSFQER-GRMFSTHTIATLTIGPQG- 397
Query: 677 LCASGGKDMKAMLWDLNDG 733
L SG + +W L G
Sbjct: 398 LLFSGDESGNLRVWTLAAG 416
Score = 35.9 bits (79), Expect = 0.030
Identities = 44/186 (23%), Positives = 72/186 (38%), Gaps = 7/186 (3%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH+ + + L + S S D TLR+WD +G+ D + + +
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSIN---LDAEAGSLISEGP 183
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+ G + IK +N +Q G V+ + AN ++ + ++ VW
Sbjct: 184 WVFLGLPN-AIKAFNVQTSQDLHLQAAGVVGQVNAMTI----ANGMLFAGTSSGSILVWK 238
Query: 596 LTN------CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-D 754
T K + GHSG + V G + SG D +WDLN + + TL
Sbjct: 239 ATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIKMWDLNTLQCIMTLKQ 296
Query: 755 HNDIIT 772
H +T
Sbjct: 297 HTGTVT 302
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 55.6 bits (128), Expect = 3e-08
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Frame = +2
Query: 215 YGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 385
+ I +K LY GH+ + D+ S D NY LS S DKT+RLW + + F H V
Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYV 371
Query: 386 LSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 562
SV F+ V+ +SGS D +++WN ++ C D D +S V + P+ II S
Sbjct: 372 TSVQFNPVNENYFMSGSIDGKVRIWN-ISGCSVVDWAD-LKDIISAVCYRPDGQGGIIGS 429
Score = 51.6 bits (118), Expect = 6e-07
Identities = 53/221 (23%), Positives = 105/221 (47%), Gaps = 9/221 (4%)
Frame = +2
Query: 95 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 274
RGH G V I+ + + +LS+S DKT+ +WK+ ++ G+ + H+ +++ V
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSND-CLGV-----FAHNSYVTSVQF 376
Query: 275 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAFSVDNRQIVSGSRDKTI 448
+ + NY +SGS D +R+W++ +G + + D KD++S V + D + + GS + +
Sbjct: 377 NPVNENYFMSGSIDGKVRIWNI-SGCSVVDWAD-LKDIISAVCYRPDGQGGIIGSLNGSC 434
Query: 449 KLWNTLAE-CKYTIQDDGH------SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNC 607
+ +N E + Q H + ++ +F P ++V D V++ N
Sbjct: 435 RFFNMSGEFLELDSQIHLHNKKKSSNKRITGFQFLPQEPTKVLVVSA-DSKVRILQGNNV 493
Query: 608 KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
K + + L + +++ DG S +D +W ND
Sbjct: 494 VRKYKGVCKTRSLTSASLTSDGKHIVSACEDSNVYIWS-ND 533
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 55.6 bits (128), Expect = 3e-08
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKD 382
P RL GH + SS Y LSGS D+ + LWD++A T + +E H
Sbjct: 161 PDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSI 220
Query: 383 VLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIV 559
+ VA+ + N I S D + +W+ L + Q H ++ + F+P + ++
Sbjct: 221 IEDVAWHMKNENIFGSAGDDCQLVIWD-LRTNQMQHQVKVHEREINYLSFNPFN-EWVLA 278
Query: 560 SCGWDRTVKVWHLTNCKLKINHLG-HSGYLNTVTVSPD-GSLCASGGKDMKAMLWDLN 727
+ D TV ++ L ++ L H G + V P+ ++ AS G+D + M+WD+N
Sbjct: 279 TASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDIN 336
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR--DE------NNYGIPQKRLY-- 241
L H G V Q+ +P + ++ SS D+ L+VW + R DE + P + L+
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 242 -GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLAAGKTTRRFEDHTKD 382
GH ISD + D + +S + D +L++W +A ED D
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDD 409
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/124 (20%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 277
GH + +A + K ++ S+ D L++W L ++ Q ++ H I+ + +
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQ-----MQHQVKVHEREINYLSFN 270
Query: 278 SDGNYAL-SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-RDKTI 448
+ L + S D T+ L+DL H +V V + ++ +++ S D+ +
Sbjct: 271 PFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRL 330
Query: 449 KLWN 460
+W+
Sbjct: 331 MVWD 334
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 55.6 bits (128), Expect = 3e-08
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 403
P + LYGH+ + D+ S D N LS S DKT+RLW + F H V V F+
Sbjct: 264 PFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFN 321
Query: 404 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 565
V+ SGS D ++W L+E + D D +S + + PN N +V C
Sbjct: 322 PVNKNNFASGSIDGKARIWG-LSEERVVAWTDVR-DSISAISYQPN-GNGFVVGC 373
Score = 41.9 bits (94), Expect = 5e-04
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
+++ GH I + S DG Y +G D +++W + + L ++
Sbjct: 192 QKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSL------LASFLRQQEPIN 245
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
+ + K + T + Y GH+ V + +S ++ +++S D+TV++
Sbjct: 246 QQAALVLFPQKAFHIEETPFQELY-----GHTGDVLDLAWSDSN---LLLSASKDKTVRL 297
Query: 590 WHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDI 766
W T C ++ H+ Y+ V +P + + ASG D KA +W L++ + + D D
Sbjct: 298 WR-TGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAWTDVRDS 356
Query: 767 IT 772
I+
Sbjct: 357 IS 358
Score = 41.9 bits (94), Expect = 5e-04
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L GH G V +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 272 LS--SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
+ + N+A SGS D R+W L+ + + D + ++++ + V G
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLSEERVV-AWTDVRDSISAISYQPNGNGFVVGCITGN 377
Query: 446 IKLWNTLAECKYTIQDD----GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 613
+ + L I D+ + ++ V F P + I+VS D V+++ T
Sbjct: 378 CRFYQILD--NDVIMDEQILIRGRNRITAVEFCPGSSEKILVS-SEDSKVRIFDKTQMIH 434
Query: 614 KINHLGHSGYLNTVT-VSPDGSLCASGGKDMKAMLWDLND 730
K + G ++ + VS G S + + LW+ ND
Sbjct: 435 KFKAPSNFGRQSSASFVSSTGKHILSVRRGVGVYLWN-ND 473
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 55.2 bits (127), Expect = 5e-08
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Frame = +2
Query: 104 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 283
+G V Q+ + D++ + ++D +++ W+ N + P L GH+ ++ V L
Sbjct: 227 SGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFE-PSASLTGHT--LAVVTLYVG 283
Query: 284 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 463
N SGS DKT+++W L + + DH+ V+S+ ++ ++S S D T+K+W
Sbjct: 284 ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIWAA 341
Query: 464 L----AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
+ E YT +++ H C A P+++ D T++++ L
Sbjct: 342 IEGGNLEVTYTHKEE-HGVLALC-GVHDAEAKPVLLCACNDNTLRLYDL 388
Score = 43.2 bits (97), Expect = 2e-04
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 5/184 (2%)
Frame = +2
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 412
+L GH +S + L S + +GS D+TLR+WD A+G+ T + + S
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK--LGGEIGCVLSEGP 203
Query: 413 RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
+V +K WN T D S V V +S ++ + D ++ W
Sbjct: 204 WLLV--GMPNLVKAWNI-----ETNADQSLSGPVGQV-YSLVVGTDLLFAGTQDGSILAW 255
Query: 593 H---LTNC-KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 757
TNC + + GH+ L VT+ + SG D +W L++ + + TL DH
Sbjct: 256 RYNAATNCFEPSASLTGHT--LAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDH 313
Query: 758 NDII 769
+ ++
Sbjct: 314 SSVV 317
Score = 35.5 bits (78), Expect = 0.039
Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 4/236 (1%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
E+ L L GH V+ IA P D + + S+D+TL VW + G+ +L G
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVWDCASGQCT-GV--LKLGGE 194
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 427
I V+ S+G + L G ++ W++ + V S+ D + +
Sbjct: 195 ---IGCVL--SEGPWLLVGM-PNLVKAWNIETN-ADQSLSGPVGQVYSLVVGTD--LLFA 245
Query: 428 GSRDKTIKLW--NTLAEC-KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
G++D +I W N C + + GH+ V + N + S D+T+KVW L
Sbjct: 246 GTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANR----LYSGSMDKTIKVWSL 301
Query: 599 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH-TLDHND 763
N + HS + ++ L S D +W +G +L T H +
Sbjct: 302 DNLQCIQTLTDHSSVVMSLICWDQFLLSCS--LDNTVKIWAAIEGGNLEVTYTHKE 355
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 54.8 bits (126), Expect = 6e-08
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Frame = +2
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNT 463
N SGS DK +++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L +
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDG 287
Query: 464 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY 643
++ + V + + P+ + +VS D TVK + L + + H+
Sbjct: 288 RDPSNSGLKWSTEAK-VEKLAWDPHSEHSFVVSLK-DGTVKGFDTRASDLSPSFIIHAHD 345
Query: 644 LNTVTVSPD---GSLCASGGKDMKAMLWDLNDGK 736
++S + +L A+G D LWDL++ +
Sbjct: 346 SEVSSISYNIHAPNLLATGSADESVKLWDLSNNQ 379
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = +2
Query: 284 GNYALSGSWDKTLRLWDL----AAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 448
GN+ G+ + ++ +WDL + + + + F+ +NR IV SGS DK +
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKV 239
Query: 449 KLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 583
K+W+ +CK T++ H V V ++ N+ +++S DRTV
Sbjct: 240 KVWDVATGKCKVTMEH--HEKKVHAVAWN-NYTPEVLLSGSRDRTV 282
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 674 SLCASGGKDMKAMLWDLNDGKHLHTLDHND 763
++ ASG +D K +WD+ GK T++H++
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHE 257
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 54.8 bits (126), Expect = 6e-08
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Frame = +2
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 463
NY S +D +++WD G+ ++ +H K SV FS D + VSGS D ++KLW +
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLW-S 837
Query: 464 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSG 640
+ E K ++ V CV+FS +++N ++ D V + L K L GH
Sbjct: 838 INE-KRSLGTIWSPANVCCVQFS-SYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEK 895
Query: 641 YLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
++ V D S D LW+LN
Sbjct: 896 AVSYVKFM-DSETIVSASTDNSLKLWNLN 923
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 54.8 bits (126), Expect = 6e-08
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-- 460
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 461 TLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD---------RTVKVWHLTNCK 610
TL K YT V+ V SP N +++ G D R K K
Sbjct: 224 TLTLLKTYTTVVP-----VNAVSLSP-LLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDK 277
Query: 611 LKINHL----GHSGYLNTVTVSPDGSLCASGGKD 700
+ + GH G +N + +PDG +SGG+D
Sbjct: 278 ILQEEIGGVKGHFGPINALAFNPDGKSFSSGGED 311
Score = 52.4 bits (120), Expect = 3e-07
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 15/226 (6%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V + D +
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAVI-TTDHFVD 117
Query: 452 LWNTLAECKYTIQDDGHSDWVS-CVRFSP------NHA-----NPIIVSCGWDRTVKVWH 595
K +D D S V P N A N IVS G D+ +++W
Sbjct: 118 R-TAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWD 176
Query: 596 LTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
KL +GH + ++ + D S +G D A LWD+
Sbjct: 177 AETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH ++ +R+ N ++ SC D T +W N + + GH+G + VS D S
Sbjct: 8 GHERPLTFLRY--NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 677 LCASGGKDMKAMLWDLNDGKHLHTLDHN 760
+G D A LWD+ GK L T N
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFN 93
Score = 36.7 bits (81), Expect = 0.017
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 329 WDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 439
WD+ +T + +T V A S+ N ++ G +D
Sbjct: 220 WDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 410 NRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 583
N+ IVSG DK I++W+ T K + ++ GH ++ + + + ++ ++ D+T
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH--FLTGSLDKTA 217
Query: 584 KVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 712
K+W + L + +N V++SP + GG+D A+
Sbjct: 218 KLWDMRTLTL-LKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAV 260
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 54.8 bits (126), Expect = 6e-08
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-- 460
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 461 TLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD---------RTVKVWHLTNCK 610
TL K YT V+ V SP N +++ G D R K K
Sbjct: 224 TLTLLKTYTTVVP-----VNAVSLSP-LLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDK 277
Query: 611 LKINHL----GHSGYLNTVTVSPDGSLCASGGKD 700
+ + GH G +N + +PDG +SGG+D
Sbjct: 278 ILQEEIGGVKGHFGPINALAFNPDGKSFSSGGED 311
Score = 52.4 bits (120), Expect = 3e-07
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 15/226 (6%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V + D +
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAVI-TTDHFVD 117
Query: 452 LWNTLAECKYTIQDDGHSDWVS-CVRFSP------NHA-----NPIIVSCGWDRTVKVWH 595
K +D D S V P N A N IVS G D+ +++W
Sbjct: 118 R-TAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWD 176
Query: 596 LTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
KL +GH + ++ + D S +G D A LWD+
Sbjct: 177 AETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH ++ +R+ N ++ SC D T +W N + + GH+G + VS D S
Sbjct: 8 GHERPLTFLRY--NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 677 LCASGGKDMKAMLWDLNDGKHLHTLDHN 760
+G D A LWD+ GK L T N
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFN 93
Score = 36.7 bits (81), Expect = 0.017
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 329 WDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 439
WD+ +T + +T V A S+ N ++ G +D
Sbjct: 220 WDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 410 NRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 583
N+ IVSG DK I++W+ T K + ++ GH ++ + + + ++ ++ D+T
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH--FLTGSLDKTA 217
Query: 584 KVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 712
K+W + L + +N V++SP + GG+D A+
Sbjct: 218 KLWDMRTLTL-LKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAV 260
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 54.8 bits (126), Expect = 6e-08
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 4/190 (2%)
Frame = +2
Query: 113 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 292
++ ++ +P+ D+++++S D + W+++R + K H + DG
Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 293 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
SG DK ++W L +G H + ++A+ + +GS DKT+K W+T
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQ- 145
Query: 473 CKYTIQDDGHSDWV--SCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL 646
Q+ H+ + C S H P++V DR + V++L N + + +
Sbjct: 146 -----QNPVHTQQLPDKCYTLSVKH--PLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKY 198
Query: 647 NT--VTVSPD 670
T VT PD
Sbjct: 199 QTRCVTAFPD 208
Score = 35.5 bits (78), Expect = 0.039
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 503 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSP 667
+D +S + FSP I+V+ WD V+ W ++ + + H +
Sbjct: 25 ADSISSLSFSPRA--DILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKD 82
Query: 668 DGSLCASGGKDMKAMLWDLNDG 733
DG+ SGG D +A +W L G
Sbjct: 83 DGTTVFSGGCDKQAKMWPLLSG 104
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +2
Query: 554 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 733
+ S G D+ K+W L + + H G + + P +L A+G D WD
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQ 146
Query: 734 KHLHT 748
+HT
Sbjct: 147 NPVHT 151
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 54.8 bits (126), Expect = 6e-08
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Frame = +2
Query: 74 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 253
L+ + +++ H+ V IA + + + S D+ + VW E + + L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 254 FISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDNRQI 421
++ + L+ DG+ SGS D+++ +W D + R H K +LS+ F+V + +
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSD-LL 339
Query: 422 VSGSRDKTIKLWNTLAECKYTIQD--DGHSDWV---SCVRFSPNHANPIIVSCGWDRTVK 586
+SGS D+T+++W + Y+ + GH+ V + VR I+S D VK
Sbjct: 340 LSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVK 399
Query: 587 VWHLTNCK 610
W ++ K
Sbjct: 400 CWKVSVTK 407
Score = 47.6 bits (108), Expect = 9e-06
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Frame = +2
Query: 227 QKRLY-GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 403
+KRL+ H+ ++ + +S DG + S SWDKTL++W + + + H V ++A S
Sbjct: 187 KKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS 244
Query: 404 VDNRQIVSGSRDKTIKLW-NTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWD 574
N + +GS D+ I++W E ++T+ + H V+ + N ++ S D
Sbjct: 245 T-NGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALAL--NDDGSVLFSGSCD 301
Query: 575 RTVKVW 592
R++ VW
Sbjct: 302 RSILVW 307
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +2
Query: 500 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 679
H+D V+ + S I S WD+T+K+W ++ + K + H +N + VS +G++
Sbjct: 194 HADAVTALAVSDG----FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTV 249
Query: 680 CASGGKDMKAMLWDLNDGKHLHTL 751
+G D + +W G+ HTL
Sbjct: 250 -YTGSADRRIRVWAKPTGEKRHTL 272
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Frame = +2
Query: 395 AFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 571
A +V + I S S DKT+K+W CK +I+ H D V+ + S N + +
Sbjct: 200 ALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK--AHDDAVNAIAVSTNGT---VYTGSA 254
Query: 572 DRTVKVWHLTNCKLKINHLG----HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
DR ++VW + + + H +N + ++ DGS+ SG D ++W+ D
Sbjct: 255 DRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWERED 311
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +2
Query: 494 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 673
DGH D VSC+ +PN+ I S D +++W +++ + GH G + +T S DG
Sbjct: 53 DGHRDGVSCMAKNPNYLKGIF-SASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDG 111
Query: 674 SLCASGGKDMKAMLWDL 724
++ S G D LW++
Sbjct: 112 NVLVSCGTDCTVRLWNV 128
Score = 47.2 bits (107), Expect = 1e-05
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 10/181 (5%)
Frame = +2
Query: 86 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 265
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 266 VVLSSDGNYALSGSWDKTLRLWDLA------AGKTTRRF-EDHTKDVLSVAFSVDNRQI- 421
+ S+DGN +S D T+RLW++ + ++ F E V AF + Q
Sbjct: 105 LTASTDGNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFE 164
Query: 422 --VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+ + + +WN G +D V VRF+P N + S DR++ ++
Sbjct: 165 GDLFATAGAQLDIWNHNRSQPVQSFQWG-TDSVISVRFNPGEPNLLATSAS-DRSITIYD 222
Query: 596 L 598
L
Sbjct: 223 L 223
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD---VLSVAFSVDNR 415
H + D+ S G ++GS+D+++R++ G + + HTK V V +S D
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDAT 335
Query: 416 QIVSGSRDKTIKLWNTLA 469
++SGS D ++LW A
Sbjct: 336 YVISGSDDTNLRLWKAKA 353
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +2
Query: 419 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
I S S D I+LW+ ++ + Q GH V + S + ++VSCG D TV++W++
Sbjct: 72 IFSASMDGDIRLWD-ISSRRTVCQFPGHQGAVRGLTASTD--GNVLVSCGTDCTVRLWNV 128
Query: 599 TNCKLKINHLGHSGYL 646
L+ + + ++
Sbjct: 129 PRPSLEDSSISSENFI 144
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 266 VVLSSDGNYALSGSWDKTLRLWDLAAGK 349
V S D Y +SGS D LRLW A +
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASE 355
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 54.4 bits (125), Expect = 8e-08
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Frame = +2
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 463
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ L +
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDG 306
Query: 464 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL----- 628
+ SD V + + P+ + +VS D TVK + + + +
Sbjct: 307 RQPSHSGFKWSVMSD-VESLAWDPHSEHSFVVSLE-DGTVKGFDVRQASISASESNPSFT 364
Query: 629 --GHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLNDGKHLHTLDHN 760
GH +V+ + +L A+G KD LWDL++ + HN
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHN 411
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E + G FI+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA-- 421
Query: 269 VLSSDGNYALS-GSWDKTLRLWD 334
S D + L+ G L+LWD
Sbjct: 422 -FSPDNPFLLAMGGVMGELKLWD 443
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 54.4 bits (125), Expect = 8e-08
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQ 418
G+S I V S+DG ++GS D ++ ++DL A + + R HT DV +V F+ ++
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 419 IVSGSRDKTIKLWNT---LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
I+SGS D K+W+ + K GH + V+ + +S G D+T+K+
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFI--DSRGDGRYFISNGKDQTIKL 344
Query: 590 WHL 598
W +
Sbjct: 345 WDI 347
Score = 50.8 bits (116), Expect = 1e-06
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +2
Query: 299 SGSWDKTLRLWDLAAGKTTRRFED--HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
SGS + + ++ G ED ++ + SV FS D R++V+GS D +I +++ A
Sbjct: 202 SGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEAN 261
Query: 473 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH-----LGHS 637
+ +++ H+ V+ V F+ N +I+S D KVW C + + +GH
Sbjct: 262 -RVSLRTVAHTSDVNTVCFADESGN-LILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHL 318
Query: 638 GYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
+ + DG S GKD LWD+
Sbjct: 319 EGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 280
H V + + ++ILS S D VW R P L GH ++ +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRG 328
Query: 281 DGNYALSGSWDKTLRLWDL 337
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 54.0 bits (124), Expect = 1e-07
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Frame = +2
Query: 146 DMILSSSRDKTLI-VWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 322
D S+ RD T V K ++N P R + I+ + S+DG Y + D L
Sbjct: 271 DSSFSAIRDPTQFSVDKAKYSKSN---PVARWHIGQGAINSIAFSNDGAYLATVGRDGYL 327
Query: 323 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 502
R++D + K + + +L A+S+D + +++G D +++W+ + + K +GH
Sbjct: 328 RIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWS-MEDRKVVAWGEGH 386
Query: 503 SDWVSCVRFSPNHANP 550
+ WVS V F ++P
Sbjct: 387 NSWVSGVAFDSYWSSP 402
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +2
Query: 512 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 691
++ + FS + A + + G D ++++ + KL + G L S DG +G
Sbjct: 306 INSIAFSNDGA--YLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 692 GKDMKAMLWDLNDGK 736
G+D +W + D K
Sbjct: 364 GEDDLVQVWSMEDRK 378
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 53.6 bits (123), Expect = 1e-07
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFS 403
GH+ + + S GN SG D + +WD LA+ K TR RFE+HT V ++A+
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 404 VDNRQIVS---GSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 571
+++ G D IK WNT C +++ C ++ S G+
Sbjct: 310 PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQ----VCSLLWSQSERELLSSHGF 365
Query: 572 DRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
+ + +W + GH+ + + SP+G AS D LW++
Sbjct: 366 TQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Frame = +2
Query: 317 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 490
T+ LWD ++G T+ ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 147 TVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTL 206
Query: 491 DDGHSDWVSCVRFSPNHANPIIVSCGWD-RTVKVWHLTNCKLKINHLGHSGYLNTVTVSP 667
GH V + + NH I+ + G D + V + +LGH+ + + S
Sbjct: 207 RGGHESRVGSLAWD-NH---ILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSE 262
Query: 668 DGSLCASGGKDMKAMLWD 721
G+ ASGG D +WD
Sbjct: 263 SGNKQASGGNDNVVHIWD 280
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 302 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Frame = +2
Query: 155 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 325
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 502
LW + + R F H V VAF+ VD+ +SGS D +++W+ + C+ D
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD-I 403
Query: 503 SDWVSCVRFSPNHANPIIVS 562
D V+ V + P+ +I S
Sbjct: 404 RDIVTAVCYRPDAKGAVIGS 423
Score = 48.4 bits (110), Expect = 5e-06
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +2
Query: 95 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 274
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 275 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 433
+ D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 554 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 730
++S D TV++W + C + H+ ++ V +P D + SG D K +WD+
Sbjct: 336 LLSSSVDETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 731 GKHLHTLDHNDIIT 772
+ + D DI+T
Sbjct: 395 CRVVDYTDIRDIVT 408
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
H G + + SPDG AS G+D +W + + + T +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYE 257
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Frame = +2
Query: 155 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 325
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 502
LW + + R F H V VAF+ VD+ +SGS D +++W+ + C+ D
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD-I 403
Query: 503 SDWVSCVRFSPNHANPIIVS 562
D V+ V + P+ +I S
Sbjct: 404 RDIVTAVCYRPDAKGAVIGS 423
Score = 48.4 bits (110), Expect = 5e-06
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +2
Query: 95 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 274
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 275 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 433
+ D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 554 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 730
++S D TV++W + C + H+ ++ V +P D + SG D K +WD+
Sbjct: 336 LLSSSVDETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 731 GKHLHTLDHNDIIT 772
+ + D DI+T
Sbjct: 395 CRVVDYTDIRDIVT 408
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
H G + + SPDG AS G+D +W + + + T +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYE 257
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 53.6 bits (123), Expect = 1e-07
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 5/183 (2%)
Frame = +2
Query: 239 YGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
+GHS + DV S DG + +S S D L + G FE H V S + +
Sbjct: 8 HGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKN 67
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
+ S S D T K+WN L + + H V FS + +++ G ++ +++
Sbjct: 68 AIRAASASADFTAKIWNALTGDE--LHSFEHKHIVRACAFSEDTHR--LLTGGMEKILRI 123
Query: 590 WHLTNCKLKINHLGHS-GYLNTVT-VSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 763
+ L +G+S G + TV + D ++ +S LWD+ K +HTL+
Sbjct: 124 FDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLETKS 183
Query: 764 IIT 772
+T
Sbjct: 184 PVT 186
Score = 43.2 bits (97), Expect = 2e-04
Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 2/198 (1%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDK-TLRL 328
+L+ +K L ++ L R + P K + I V N LS D +RL
Sbjct: 112 LLTGGMEKILRIFDLNRPD----APPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRL 167
Query: 329 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 508
WD+ + K E + V S S D R I + ++K W+ A+ ++
Sbjct: 168 WDIRSDKIVHTLETKSP-VTSAEVSQDGRYITTAD-GSSVKFWD--AKNFGLLKSYDMPC 223
Query: 509 WVSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCA 685
V P H N I G D V + T ++ N GH G ++ V +P G
Sbjct: 224 NVESASLEPKHGNTFIAG-GEDMWVHRFDFQTGEEIGCNK-GHHGPVHCVRYAPGGESYT 281
Query: 686 SGGKDMKAMLWDLNDGKH 739
SG +D +W + H
Sbjct: 282 SGSEDGTVRIWVVGSVNH 299
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 53.2 bits (122), Expect = 2e-07
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
H +S + LS DG S SWD+TL++W K F + D ++ +N I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 425 SGSRDKTIKLW-------NTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWDR 577
+GS D+ IK+W N + K+++ H+ ++ + S + + ++ S G D
Sbjct: 224 TGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGS-LLHSGGSDG 282
Query: 578 TVKVWHLTNCK--LKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
++ VW + + + L GH+ + + V D LC SG D LW
Sbjct: 283 SILVWERDDGGDIVVVGMLRGHTESVLCLAVVSD-ILC-SGSADKTVRLW 330
Score = 49.6 bits (113), Expect = 2e-06
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Frame = +2
Query: 371 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHAN 547
H V +A S D + S S D+T+K+W T +C + + H D ++ V S N
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTN-AHDDAINAVALSENGD- 221
Query: 548 PIIVSCGWDRTVKVWHLT----NCKLKINHL------GHSGYLNTVTVS-PDGSLCASGG 694
I + D+ +KVW N K K H H+ +N + +S +GSL SGG
Sbjct: 222 --IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGG 279
Query: 695 KDMKAMLWDLNDG 733
D ++W+ +DG
Sbjct: 280 SDGSILVWERDDG 292
Score = 48.0 bits (109), Expect = 7e-06
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKR-----LYGHSHFISDVVLS-SDGNYALSGSWD 313
I + S D+ + VW+ +E N +K L H+ I+ + LS ++G+ SG D
Sbjct: 222 IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSD 281
Query: 314 KTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKY 481
++ +W+ G HT+ VL +A D + SGS DKT++LW A +
Sbjct: 282 GSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDI--LCSGSADKTVRLWKCSAKDYSC 339
Query: 482 TIQDDGHSDWVSCVRFS------PNHANPIIVSCGWDRTVKVWHL 598
+GH V C+ + + A+ I S G D VKVW +
Sbjct: 340 LAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQV 384
Score = 44.4 bits (100), Expect = 9e-05
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L HN + +A + ++ S D +++VW+ RD+ + L GH+ + +
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGMLRGHTESVLCLA 312
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDV--LSVAFSVDNRQ------- 418
+ SD SGS DKT+RLW +A E H V L+ AF D+R+
Sbjct: 313 VVSD--ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFR-DSRKADEASYH 369
Query: 419 IVSGSRDKTIKLWNTL 466
I SG D +K+W L
Sbjct: 370 IYSGGLDSQVKVWQVL 385
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 10/171 (5%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFS 403
GH+ + + S G SG D + +WD ++ TT+ R E+HT V ++A+
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 323
Query: 404 VDNRQIVS---GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
+++ G D+TIK WNT D G V + +S N ++ S G+
Sbjct: 324 PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQ--VCSLLWSKNE-RELLSSHGFT 380
Query: 575 RT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
+ + +W + GH+ + + SPDG AS D W++
Sbjct: 381 QNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 47.6 bits (108), Expect = 9e-06
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 9/231 (3%)
Frame = +2
Query: 56 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-- 229
SK + +L T+ ++ + P+ P +L S+ +L + Y IPQ
Sbjct: 70 SKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPRRY-IPQTS 128
Query: 230 KRLYGHSHFISDVVLSS-DGNYA--LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSV 394
+R + D L+ D A L+ + D T+ LWD + G T+ ++ V S+
Sbjct: 129 ERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSI 188
Query: 395 AFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
++ D R + G + ++LW++ + + GH V + ++ NH I+ + G D
Sbjct: 189 NWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-NH---ILTTGGMD 244
Query: 575 RTVKVWHLTNCKLKI--NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
+ + + + I + GH+ + + S G ASGG D +WD
Sbjct: 245 GLI-INNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +2
Query: 362 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 526
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 321
Query: 527 FSPNHANPIIV-SCGWDRTVKVWH 595
+ P AN + G DRT+K W+
Sbjct: 322 WCPFQANLLATGGGGGDRTIKFWN 345
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 554 IVSCGWDRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
+++ D TV +W + + G + ++ +PDG A G + + LWD
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 212
Query: 728 DGKHLHTL 751
+ L TL
Sbjct: 213 SNRQLRTL 220
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 10/171 (5%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFS 403
GH+ + + S G SG D + +WD ++ TT+ R E+HT V ++A+
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 313
Query: 404 VDNRQIVS---GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
+++ G D+TIK WNT D G V + +S N ++ S G+
Sbjct: 314 PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQ--VCSLLWSKNE-RELLSSHGFT 370
Query: 575 RT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
+ + +W + GH+ + + SPDG AS D W++
Sbjct: 371 QNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 47.6 bits (108), Expect = 9e-06
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 9/231 (3%)
Frame = +2
Query: 56 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-- 229
SK + +L T+ ++ + P+ P +L S+ +L + Y IPQ
Sbjct: 60 SKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPRRY-IPQTS 118
Query: 230 KRLYGHSHFISDVVLSS-DGNYA--LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSV 394
+R + D L+ D A L+ + D T+ LWD + G T+ ++ V S+
Sbjct: 119 ERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSI 178
Query: 395 AFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
++ D R + G + ++LW++ + + GH V + ++ NH I+ + G D
Sbjct: 179 NWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-NH---ILTTGGMD 234
Query: 575 RTVKVWHLTNCKLKI--NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
+ + + + I + GH+ + + S G ASGG D +WD
Sbjct: 235 GLI-INNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +2
Query: 362 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 526
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 311
Query: 527 FSPNHANPIIV-SCGWDRTVKVWH 595
+ P AN + G DRT+K W+
Sbjct: 312 WCPFQANLLATGGGGGDRTIKFWN 335
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 554 IVSCGWDRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
+++ D TV +W + + G + ++ +PDG A G + + LWD
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 202
Query: 728 DGKHLHTL 751
+ L TL
Sbjct: 203 SNRQLRTL 210
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 53.2 bits (122), Expect = 2e-07
Identities = 65/253 (25%), Positives = 100/253 (39%), Gaps = 13/253 (5%)
Frame = +2
Query: 29 RESSLFKPFSKMSETLKLRGT--LRGH-NGWVTQIATNPKYPDMILSSSRDKTLI-VWKL 196
+E S FK S + + + + G GH +G + +PK + S TL ++K
Sbjct: 125 KEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKA 184
Query: 197 TRDENNYGIPQKRLYG----HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 364
+ NY +K H+ +S + L+ + S SWD+T+++W +A K
Sbjct: 185 SLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESI 244
Query: 365 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-----DGHSDWVSCVRF 529
H V SV S + SGS D T+K W + KYT V+ +
Sbjct: 245 PAHDDAVNSVV-STTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAV 303
Query: 530 SPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 709
S N A S D V W +L + L + + GSL SG D
Sbjct: 304 SKNGAAVYFGSS--DGLVNFWEREK-QLNYGGILKGHKLAVLCLEVAGSLVFSGSADKTI 360
Query: 710 MLWDLNDGKHLHT 748
+W DG ++HT
Sbjct: 361 CVWK-RDG-NIHT 371
Score = 33.5 bits (73), Expect = 0.16
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Frame = +2
Query: 80 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 259
L TL VT +A + + SS D + W+ + N GI L GH +
Sbjct: 287 LMQTLTKQESAVTALAVSKNGAAVYFGSS-DGLVNFWEREKQLNYGGI----LKGHK--L 339
Query: 260 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQ----- 418
+ + L G+ SGS DKT+ +W T HT V +A D
Sbjct: 340 AVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRD 399
Query: 419 ----IVSGSRDKTIKLW 457
+ SGS DK++K+W
Sbjct: 400 KKWIVYSGSLDKSVKVW 416
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/98 (26%), Positives = 52/98 (53%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
I+ + S+DG + + D LR++D K + + +L ++S+D + I++G
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGE 365
Query: 437 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 550
D +++W+ + + K +GH+ WVS V F N ++P
Sbjct: 366 DDLVQVWS-MEDRKVVAWGEGHNSWVSGVAFDSNWSSP 402
Score = 33.1 bits (72), Expect = 0.21
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Frame = +2
Query: 389 SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 568
S+AFS D + + RD +++++ L + K + + C +S + I++ G
Sbjct: 308 SIAFSNDGAHLATVGRDGYLRIFDFLTQ-KLVCGGKSYYGALLCCSWSMD--GKYILTGG 364
Query: 569 WDRTVKVWHLTNCKLKINHLGHSGYLNTVTV-----SP--DGS------LCASGGKDMKA 709
D V+VW + + K+ GH+ +++ V SP DGS S G+D +
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDGSGEHVMYRFGSVGQDTQL 424
Query: 710 MLWDL 724
+LWDL
Sbjct: 425 LLWDL 429
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +2
Query: 512 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 691
++ + FS + A+ + + G D ++++ KL + G L + S DG +G
Sbjct: 306 INSIAFSNDGAH--LATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTG 363
Query: 692 GKDMKAMLWDLNDGK 736
G+D +W + D K
Sbjct: 364 GEDDLVQVWSMEDRK 378
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Frame = +2
Query: 239 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 418
+ H IS + LS D SGSWDKT ++W ++ + H +D ++ S +
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAH-EDAVNAVVSGFDGL 266
Query: 419 IVSGSRDKTIKLW---NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
+ +GS D T+K+W + + K+ + + + + + ++ D TV
Sbjct: 267 VFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNF 326
Query: 590 WHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 745
W N +K + L + + G+L SG D+ +W +G H
Sbjct: 327 WEREN-NMKNGGVLKGHKLAVLCLVAAGNLMFSGSADLGIRVWRRPEGGGEH 377
Score = 36.7 bits (81), Expect = 0.017
Identities = 46/198 (23%), Positives = 76/198 (38%), Gaps = 6/198 (3%)
Frame = +2
Query: 146 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 325
D I + +D + VWK E+N R G + D + +S + S+ R
Sbjct: 147 DKIFTGHQDGKIRVWKAASKESNV----HRRVGTMPNLLDYIRNS----IVPSSYFNFTR 198
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 505
+A R H + +A S D R + SGS DKT K+W +++ + + H
Sbjct: 199 RNRSSAALGFR----HLDAISCLALSEDKRLLYSGSWDKTFKVWR-VSDLRCVESVNAHE 253
Query: 506 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH------LGHSGYLNTVTVSP 667
D V+ V + + ++ + D TVKVW + H L + + V
Sbjct: 254 DAVNAV---VSGFDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQ 310
Query: 668 DGSLCASGGKDMKAMLWD 721
+L G D W+
Sbjct: 311 SATLVYCGSSDGTVNFWE 328
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 52.8 bits (121), Expect = 2e-07
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 16/227 (7%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
++GH +T + N + D++ S ++D T VW +N + R GHS +
Sbjct: 33 MKGHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFA---DNGERLGTYR--GHSGAVWCCD 86
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+S D + ++GS D+T +LWD+ +GK F+ SV FSV + V + D +
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAVI-TTDHFVG 144
Query: 452 LWNTLAECKYTIQD--DGHSDWVSCVRFSP------NHA-----NPIIVSCGWDRTVKVW 592
++ K +D D D V ++ SP N A N IVS G D +++W
Sbjct: 145 T-SSAIHVKRIAEDPEDQVGDSVLVLQ-SPDGKKKINRAVWGPLNQTIVSGGEDAAIRIW 202
Query: 593 HLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
KL +GH + ++ + D S +G D A LWD+
Sbjct: 203 DAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH ++ +R++ N ++ SC D T VW N + + GHSG + +S D S
Sbjct: 35 GHERPLTFLRYNRN--GDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 677 LCASGGKDMKAMLWDLNDGKHLHT 748
+G D A LWD+ GK L T
Sbjct: 93 RLITGSADQTAKLWDVKSGKELFT 116
Score = 51.2 bits (117), Expect = 7e-07
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-- 460
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMR 250
Query: 461 TLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV------------WHLT 601
TL K YT V+ V SP N +++ G D + ++ T
Sbjct: 251 TLTLIKTYTTVVP-----VNAVAMSP-LLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDT 304
Query: 602 NCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKD 700
+ +I + GH G +N + SPDG +SGG+D
Sbjct: 305 ILQEEIGGVKGHFGPINALAFSPDGKSFSSGGED 338
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQ 418
GH I+ + ++D ++ L+GS DKT +LWD+ + + V +VA S + N
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTT-VVPVNAVAMSPLLNHV 276
Query: 419 IVSGSRD 439
++ G +D
Sbjct: 277 VLGGGQD 283
Score = 33.5 bits (73), Expect = 0.16
Identities = 47/225 (20%), Positives = 98/225 (43%), Gaps = 16/225 (7%)
Frame = +2
Query: 86 GTLRGHNG--WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN----NYGIPQKRLYGH 247
GT RGH+G W I+ + +++ S D+T +W + + +G P + +
Sbjct: 73 GTYRGHSGAVWCCDISRDSS---RLITGSADQTAKLWDVKSGKELFTFKFGAPARSV--- 126
Query: 248 SHFISD--VVLSSDGNYALSGSWDKTLRLWD-----LAAGKTTRRFEDHTKDVLSVAFSV 406
+ D V+++D ++ + S R+ + + + D K + +
Sbjct: 127 DFSVGDHLAVITTD-HFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGP 185
Query: 407 DNRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 580
N+ IVSG D I++W+ T K + ++ GH + ++ + + + ++ ++ D+T
Sbjct: 186 LNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSH--FLTGSHDKT 243
Query: 581 VKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 712
K+W + L I +N V +SP + GG+D A+
Sbjct: 244 AKLWDMRTLTL-IKTYTTVVPVNAVAMSPLLNHVVLGGGQDASAV 287
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 52.8 bits (121), Expect = 2e-07
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRR------FEDHTKD 382
P RL GH + S Y LSGS D+ + LWD++A + +E H
Sbjct: 160 PDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESA 219
Query: 383 VLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIV 559
+ V++ + N + S D + +W+T + Q H V+ + F+P + ++
Sbjct: 220 IADVSWHMKNENLFGSAGEDGRLVIWDTRTN-QMQHQVKVHEREVNYLSFNPFN-EWVLA 277
Query: 560 SCGWDRTVKVWHLTNCKLKINHLG-HSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 727
+ D TV ++ L ++ + H G + V P+ ++ AS G+D + M+WDLN
Sbjct: 278 TASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLN 335
Score = 37.9 bits (84), Expect = 0.007
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR-DENNYGI-------PQKRLY-- 241
+ H G V Q+ +P + ++ SS D+ L+VW L R E I P + L+
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 242 -GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDV 385
GH ISD + + + + S + D +L++W +A ++ R E+ +D+
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA--ESIYRDEEDAEDI 407
Score = 29.9 bits (64), Expect = 2.0
Identities = 37/186 (19%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 277
GH + ++ + K ++ S+ D L++W ++ Q ++ H ++ + +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQ-----MQHQVKVHEREVNYLSFN 269
Query: 278 SDGNYAL-SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-RDKTI 448
+ L + S D T+ L+DL H +V V + ++ +++ S D+ +
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRL 329
Query: 449 KLW--NTLAECKYTIQDD-------------GHSDWVSCVRFSPNHANP-IIVSCGWDRT 580
+W N + E + I+ D GH +S F+ N P +I S D +
Sbjct: 330 MVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKIS--DFAWNKNEPWVIASVAEDNS 387
Query: 581 VKVWHL 598
++VW +
Sbjct: 388 LQVWQM 393
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 52.4 bits (120), Expect = 3e-07
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Frame = +2
Query: 104 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV-LS- 277
NG ++ +PK S SR K++ + + E +G+ +K + + DV+ LS
Sbjct: 419 NGSPEPVSMSPKRRGRT-SFSR-KSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSW 476
Query: 278 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 454
S + LS S DKT+RLWDL++ KT + H+ V + F+ VD+ +SGS D +++
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 455 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 562
W ++ + + +D H + V+ ++P+ ++ S
Sbjct: 536 W-SIPDHQVVDWNDLH-EMVTAACYTPDGQGALVGS 569
Score = 42.7 bits (96), Expect = 3e-04
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK------TTRRFEDHTKDVL- 388
+ + H I + S DG Y S D +++W + + + + ED + ++
Sbjct: 357 QEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFL 416
Query: 389 -------SVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDD------GHSDWVSCVR 526
V+ S R S SR K++ L N L E + + + GH D V +
Sbjct: 417 LANGSPEPVSMSPKRRGRTSFSR-KSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLS 475
Query: 527 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDM 703
+S + ++S D+TV++W L++ K + HS Y+ + +P D + SG D
Sbjct: 476 WSKSQH---LLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDA 531
Query: 704 KAMLWDLNDGKHLHTLDHNDIIT 772
K +W + D + + D ++++T
Sbjct: 532 KVRIWSIPDHQVVDWNDLHEMVT 554
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 280
H+ +VT I NP + +S S D + +W + ++ + L+ ++ +
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIP---DHQVVDWNDLH---EMVTAACYTP 560
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 382
DG AL GS+ T L++ K +R E + K+
Sbjct: 561 DGQGALVGSYKGTCCLYNTHDNKLQQRREINLKN 594
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = +2
Query: 95 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 274
RGH G + ++ + K +LSSS D+T+ +W++ + R++ H F++ V
Sbjct: 360 RGHTGEILDLSWSEK--GFLLSSSVDETVRLWRVGSSDECI-----RVFSHKSFVTCVAF 412
Query: 275 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+ D NY +SGS D +R+WD++ + + D + V ++ + D + V GS +
Sbjct: 413 NPVDDNYFISGSIDGKVRIWDVSQFRVV-DYTDIRQIVTALCYRPDGKGAVVGSMTGECR 471
Query: 452 LWNT 463
++T
Sbjct: 472 FYHT 475
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 403
PQ GH+ I D+ S G + LS S D+T+RLW + + R H V VAF+
Sbjct: 355 PQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFN 413
Query: 404 -VDNRQIVSGSRDKTIKLWN 460
VD+ +SGS D +++W+
Sbjct: 414 PVDDNYFISGSIDGKVRIWD 433
Score = 45.2 bits (102), Expect = 5e-05
Identities = 28/125 (22%), Positives = 59/125 (47%)
Frame = +2
Query: 362 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 541
F HT ++L +++S + ++S S D+T++LW + I+ H +V+CV F+P
Sbjct: 359 FRGHTGEILDLSWS-EKGFLLSSSVDETVRLWR-VGSSDECIRVFSHKSFVTCVAFNPVD 416
Query: 542 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
N +S D V++W ++ ++ +++ + + PDG G + +
Sbjct: 417 DN-YFISGSIDGKVRIWDVSQFRV-VDYTDIRQIVTALCYRPDGKGAVVGSMTGECRFYH 474
Query: 722 LNDGK 736
D +
Sbjct: 475 TTDNQ 479
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 554 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 730
++S D TV++W + + I H ++ V +P D + SG D K +WD++
Sbjct: 377 LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQ 436
Query: 731 GKHLHTLDHNDIIT 772
+ + D I+T
Sbjct: 437 FRVVDYTDIRQIVT 450
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 52.4 bits (120), Expect = 3e-07
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 15/226 (6%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V + D +
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAVI-TTDHFVD 117
Query: 452 LWNTLAECKYTIQDDGHSDWVS-CVRFSP------NHA-----NPIIVSCGWDRTVKVWH 595
K +D D S V P N A N IVS G D+ +++W
Sbjct: 118 R-TAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWD 176
Query: 596 LTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
KL +GH + ++ + D S +G D A LWD+
Sbjct: 177 AETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH ++ +R+ N ++ SC D T +W N + + GH+G + VS D S
Sbjct: 8 GHERPLTFLRY--NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 677 LCASGGKDMKAMLWDLNDGKHLHTLDHN 760
+G D A LWD+ GK L T N
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFN 93
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 410 NRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 583
N+ IVSG DK I++W+ T K + ++ GH ++ + + + ++ ++ D+T
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH--FLTGSLDKTA 217
Query: 584 KVWHLTNCKL 613
K+W + L
Sbjct: 218 KLWDMRTLTL 227
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Frame = +2
Query: 299 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAEC 475
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV 610
Query: 476 KY-TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLN 649
TI+ + + CV+F P+ + D V + L N KL + +GH ++
Sbjct: 611 SIGTIKTKAN---ICCVQF-PSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 650 TVTVSPDGSLCASGGKDMKAMLWDLN 727
V D S S D LWDL+
Sbjct: 667 YVRF-VDSSTLVSSSTDNTLKLWDLS 691
Score = 41.5 bits (93), Expect = 6e-04
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Frame = +2
Query: 122 IATNPKYPDMILSSSRDKTLIVWKLTRDE--NNYGIPQKRLYGHSHFISDVVLSSDGNYA 295
I N + SS+ + + VW + R++ +KR++ + +D L +
Sbjct: 539 ICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLA----- 593
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAE 472
SGS D +++LW + G + + ++ V F S R + GS D + ++
Sbjct: 594 -SGSDDGSVKLWSINQGVSIGTIKTKA-NICCVQFPSETGRSLAFGSADHKVYYYDLRNP 651
Query: 473 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH------LGH 634
GH VS VRF + +VS D T+K+W L+ IN +GH
Sbjct: 652 KLPLCTMIGHHKTVSYVRFVDSST---LVSSSTDNTLKLWDLSMSISGINETPLHSFMGH 708
Query: 635 SGYLNTVTVSPDGSLCASGGKDMKAMLW 718
+ N V +S A+G + + ++
Sbjct: 709 TNVKNFVGLSVSDGYIATGSETNEVFVY 736
Score = 33.5 bits (73), Expect = 0.16
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Frame = +2
Query: 383 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSP------- 535
V ++ F D + +K IK++ EC+ I+D D H V S
Sbjct: 487 VCAIGFDRDGEFFATAGVNKKIKIF----ECESIIKDGRDIHYPVVELASRSKLSGICWN 542
Query: 536 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 712
++ + S ++ V+VW + +L H + ++ S D +L ASG D
Sbjct: 543 SYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVK 602
Query: 713 LWDLNDGKHLHTL 751
LW +N G + T+
Sbjct: 603 LWSINQGVSIGTI 615
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Frame = +2
Query: 299 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAEC 475
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV 610
Query: 476 KY-TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLN 649
TI+ + + CV+F P+ + D V + L N KL + +GH ++
Sbjct: 611 SIGTIKTKAN---ICCVQF-PSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 650 TVTVSPDGSLCASGGKDMKAMLWDLN 727
V D S S D LWDL+
Sbjct: 667 YVRF-VDSSTLVSSSTDNTLKLWDLS 691
Score = 41.5 bits (93), Expect = 6e-04
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Frame = +2
Query: 122 IATNPKYPDMILSSSRDKTLIVWKLTRDE--NNYGIPQKRLYGHSHFISDVVLSSDGNYA 295
I N + SS+ + + VW + R++ +KR++ + +D L +
Sbjct: 539 ICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLA----- 593
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAE 472
SGS D +++LW + G + + ++ V F S R + GS D + ++
Sbjct: 594 -SGSDDGSVKLWSINQGVSIGTIKTKA-NICCVQFPSETGRSLAFGSADHKVYYYDLRNP 651
Query: 473 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH------LGH 634
GH VS VRF + +VS D T+K+W L+ IN +GH
Sbjct: 652 KLPLCTMIGHHKTVSYVRFVDSST---LVSSSTDNTLKLWDLSMSISGINETPLHSFMGH 708
Query: 635 SGYLNTVTVSPDGSLCASGGKDMKAMLW 718
+ N V +S A+G + + ++
Sbjct: 709 TNVKNFVGLSVSDGYIATGSETNEVFVY 736
Score = 33.5 bits (73), Expect = 0.16
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Frame = +2
Query: 383 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSP------- 535
V ++ F D + +K IK++ EC+ I+D D H V S
Sbjct: 487 VCAIGFDRDGEFFATAGVNKKIKIF----ECESIIKDGRDIHYPVVELASRSKLSGICWN 542
Query: 536 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 712
++ + S ++ V+VW + +L H + ++ S D +L ASG D
Sbjct: 543 SYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVK 602
Query: 713 LWDLNDGKHLHTL 751
LW +N G + T+
Sbjct: 603 LWSINQGVSIGTI 615
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 52.4 bits (120), Expect = 3e-07
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
H +S + LS DG+ S SWD++ ++W + K E D ++ + +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
Query: 425 SGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW-H 595
+GS DK IK+WN + K+++ H V+ + S + ++ S DR++ VW
Sbjct: 251 TGSADKKIKVWNK-KDKKHSLVATLTKHLSAVNALAISED--GKVLYSGACDRSILVWER 307
Query: 596 LTNCKLKINHL-------GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
L N + H+ GH + + V+ D L SG D +W
Sbjct: 308 LINGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSGSADKSLRVW 353
Score = 50.0 bits (114), Expect = 2e-06
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 6/238 (2%)
Frame = +2
Query: 50 PFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 229
PFS T R + NG V + D ++S+ +D + VWK+ + N G
Sbjct: 99 PFSPEYSTGDDRNVVANGNGGVKSLVI---LGDKLISAHQDHKIRVWKIIDESNRRGQKY 155
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
K ++ + +D L S ++ K + H V S+A S D
Sbjct: 156 K-------CVATLPTMNDRFKTLFSSKSYV----EVRRHKKCT-WVHHVDAVSSLALSQD 203
Query: 410 NRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 586
+ S S D++ K+W T +C +I+ H D ++ + S + + + D+ +K
Sbjct: 204 GSLLYSASWDRSFKIWRTSDFKCLDSIEK-AHDDAINAIVVSKDG---FVYTGSADKKIK 259
Query: 587 VWHLTNCK--LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LN-DGKHLH 745
VW+ + K L H +N + +S DG + SG D ++W+ +N D + LH
Sbjct: 260 VWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELH 317
Score = 47.2 bits (107), Expect = 1e-05
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Frame = +2
Query: 47 KPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT---RDENNY 217
K ++K + L TL H V +A + ++ S + D++++VW+ DE +
Sbjct: 259 KVWNKKDKKHSLVATLTKHLSAVNALAISED-GKVLYSGACDRSILVWERLINGDDEELH 317
Query: 218 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKD 382
L GH I + ++SD LSGS DK+LR+W + E HTK
Sbjct: 318 MSVVGALRGHRKAIMCLAVASD--LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKP 375
Query: 383 VLSVAFSVDNRQ--------IVSGSRDKTIKLWN 460
V S+A SV + + SGS D ++K+WN
Sbjct: 376 VKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKVWN 409
Score = 37.5 bits (83), Expect = 0.010
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +2
Query: 86 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 265
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 266 VVLS---SDGN-----YALSGSWDKTLRLWDL 337
+ +S SD N SGS D +L++W+L
Sbjct: 379 LAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 614 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD--HNDII 769
K + H ++++ +S DGSL S D +W +D K L +++ H+D I
Sbjct: 185 KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAI 238
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 51.6 bits (118), Expect = 6e-07
Identities = 31/115 (26%), Positives = 59/115 (51%)
Frame = +2
Query: 347 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 526
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 527 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 691
F+P + I S D V++W + C++ ++ G + V PDG G
Sbjct: 404 FNPVDDDHFI-SGSIDGKVRIWSASQCQV-VDWADARGIVTAVCYQPDGQAVIIG 456
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 403
P GHS I D+ S + N LS S D ++RLW + F H V SV F+
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFN 405
Query: 404 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 556
VD+ +SGS D +++W+ ++C+ D V+ V + P+ II
Sbjct: 406 PVDDDHFISGSIDGKVRIWSA-SQCQVVDWADARG-IVTAVCYQPDGQAVII 455
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 202
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 51.6 bits (118), Expect = 6e-07
Identities = 31/115 (26%), Positives = 59/115 (51%)
Frame = +2
Query: 347 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 526
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 527 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 691
F+P + I S D V++W + C++ ++ G + V PDG G
Sbjct: 404 FNPVDDDHFI-SGSIDGKVRIWSASQCQV-VDWADARGIVTAVCYQPDGQAVIIG 456
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 403
P GHS I D+ S + N LS S D ++RLW + F H V SV F+
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFN 405
Query: 404 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 556
VD+ +SGS D +++W+ ++C+ D V+ V + P+ II
Sbjct: 406 PVDDDHFISGSIDGKVRIWSA-SQCQVVDWADARG-IVTAVCYQPDGQAVII 455
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 202
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 51.6 bits (118), Expect = 6e-07
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 12/221 (5%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L GH V +A NP +I S S DKT+ +W+ + ++ GH +
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCK----LGHR------L 65
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
S DGN + W+ ++ H +V SV+++ + + RDK++
Sbjct: 66 GSFDGNTCV---WENF-----ATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVW 117
Query: 452 LWNTLAECKYTIQD----DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT------ 601
+W E GHS+ V V + P ++ SC +D T+K+W
Sbjct: 118 IWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHP--TMDVLFSCSYDNTIKIWCSEDEDGDY 175
Query: 602 NCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
NC ++ L GHS + +++ + G + D+ +W
Sbjct: 176 NCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIW 216
Score = 32.3 bits (70), Expect = 0.37
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 356 RRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 532
++ E HT V +VA++ + I S S DKT+++W + + GH R
Sbjct: 14 QKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGH-------RLG 66
Query: 533 PNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 712
N +C W+ T+ + GH + +V+ + GSL A+ G+D
Sbjct: 67 SFDGN----TCVWENFA-----TDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVW 117
Query: 713 LWDL 724
+W++
Sbjct: 118 IWEI 121
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 51.2 bits (117), Expect = 7e-07
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Frame = +2
Query: 95 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF-ISDVV 271
+GH +T +P+ + +L+SS D +L +W + + + + +L ++
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVDNRQIVSGSRD 439
DG G D ++++W L G +R + HT D+ SV FS D R ++S S D
Sbjct: 335 WDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFD 394
Query: 440 KTIKLWN 460
++K+W+
Sbjct: 395 GSLKVWD 401
Score = 45.6 bits (103), Expect = 4e-05
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Frame = +2
Query: 203 DENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL----AAGKTTRR 361
+EN Y IP + +L GH+ +S + + S G LSGS+D T+R++D + ++ R+
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQ 218
Query: 362 FE-DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN----TLAEC---KYTIQD----DGHS 505
E V SV++S + Q + + K+++ TL E I+D GH
Sbjct: 219 IEPSEGHQVRSVSWSPTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHI 278
Query: 506 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN----HLGHSGYLNTVTVS--P 667
++C + P ++ S D ++++W + N + L G + T +
Sbjct: 279 CGLTCGEWHPRTKETVLTS-SEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDR 337
Query: 668 DGSLCASGGKDMKAMLWDLNDG 733
DG A G D +W L G
Sbjct: 338 DGKRIAGGVGDGSIQIWSLKPG 359
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FE--DHTKDVLSVAFSVDNR 415
H+ I+ V SSDG LS S+D +L++WDL K + FE + +VAFS D +
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 571
I++G+ + L C Y D + V V SP + +V C W
Sbjct: 432 IILTGTSVEKDSTTGGLL-CFY---DRTKLEIVQKVGISPTSS---VVQCAW 476
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Frame = +2
Query: 59 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 235
K ++ + +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+ +
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAK 167
Query: 416 QIVSGSRDKTIKLWNTLAECK 478
+ S S D+T +++ + K
Sbjct: 168 YVASLSSDRTCRIYANKPQTK 188
Score = 35.1 bits (77), Expect = 0.052
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Frame = +2
Query: 377 KDVLSVAFSVDNRQIVSGSRDKTIKLW---NTLAECK-----YTIQDDGHSDWVSCVRFS 532
K VL+V F + + + D IKLW + AE K Y H V+ +RFS
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 533 PNHANPIIVSCGWDRTVKVWHL----TNCKLKINHL--GHSGYLNTVTVSPDGSLCASGG 694
P+ ++ S + +W L TN K++ H + + SPD + SG
Sbjct: 74 PS--GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGS 131
Query: 695 KDMKAMLWDLNDGKHLHTLD 754
D ++WD+N G LD
Sbjct: 132 VDNSCIIWDVNKGSVHQILD 151
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Frame = +2
Query: 482 TIQDDGHSDW-VSCVRFSPNHANPIIVSCGWDRTVKVWHLTN--CKLKINHLGHSGYL-- 646
TIQ H V V F P + ++ + G D +K+W + + + K+ + + L
Sbjct: 5 TIQISWHDGKPVLTVDFHP--ISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTY 62
Query: 647 -----NTVTVSPDGSLCASGGKDMKAMLWDLN 727
NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Frame = +2
Query: 59 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 235
K ++ + +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+ +
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAK 167
Query: 416 QIVSGSRDKTIKLWNTLAECK 478
+ S S D+T +++ + K
Sbjct: 168 YVASLSSDRTCRIYANKPQTK 188
Score = 35.1 bits (77), Expect = 0.052
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Frame = +2
Query: 377 KDVLSVAFSVDNRQIVSGSRDKTIKLW---NTLAECK-----YTIQDDGHSDWVSCVRFS 532
K VL+V F + + + D IKLW + AE K Y H V+ +RFS
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 533 PNHANPIIVSCGWDRTVKVWHL----TNCKLKINHL--GHSGYLNTVTVSPDGSLCASGG 694
P+ ++ S + +W L TN K++ H + + SPD + SG
Sbjct: 74 PS--GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGS 131
Query: 695 KDMKAMLWDLNDGKHLHTLD 754
D ++WD+N G LD
Sbjct: 132 VDNSCIIWDVNKGSVHQILD 151
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Frame = +2
Query: 482 TIQDDGHSDW-VSCVRFSPNHANPIIVSCGWDRTVKVWHLTN--CKLKINHLGHSGYL-- 646
TIQ H V V F P + ++ + G D +K+W + + + K+ + + L
Sbjct: 5 TIQISWHDGKPVLTVDFHP--ISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTY 62
Query: 647 -----NTVTVSPDGSLCASGGKDMKAMLWDLN 727
NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 50.8 bits (116), Expect = 1e-06
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 2/211 (0%)
Frame = +2
Query: 107 GWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG 286
G V Q+ M+ + + +++VWK T E++ L GH H G
Sbjct: 264 GVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH-HSGEVTCFVVGG 322
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-T 463
SGS DKT+++WDL + + H V S+ ++ ++S S D TIKLW +
Sbjct: 323 EVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTIKLWACS 380
Query: 464 LAECKYTIQDDGHSDWV-SCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSG 640
E +Q V + A PI+ + V ++ L + + + + +
Sbjct: 381 ENESLKVVQTRKQELSVHTLCGMHDAEAKPIMFCSYQNGAVGIFDLPSFEER-GKMFSTQ 439
Query: 641 YLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 733
+ T+T+ P G L SG K +W L G
Sbjct: 440 TICTLTIGP-GGLLFSGDKSGNLRVWSLASG 469
Score = 32.3 bits (70), Expect = 0.37
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 8/231 (3%)
Frame = +2
Query: 74 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 253
L + L GH + IA P+ D + S S D TL++W + I + G
Sbjct: 177 LAMVAALEGHKNDIKGIAL-PQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGS-- 233
Query: 254 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDNRQIVS 427
L S+G + G ++ +++ K H + V+ A + N + +
Sbjct: 234 ------LISEGPWVFLGL-PNAVKAFNVQNSKDV-----HLEGVVGQVHAMTAANGMLFA 281
Query: 428 GSRDKTIKLWN-TLAEC---KYTIQDDGH-SDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
G+ +I +W T +E KY +GH S V+C ++ S D+T+KVW
Sbjct: 282 GTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVG----GEVLYSGSVDKTIKVW 337
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSPDGSLC-ASGGKDMKAMLWDLNDGKHL 742
L + ++ H G TVT C S D LW ++ + L
Sbjct: 338 DLNTLQCRMTLKQHIG---TVTSLLCWDKCLISSSLDGTIKLWACSENESL 385
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 50.8 bits (116), Expect = 1e-06
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGS-------WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
++ VV+S DGN+ G W+K + D + H VL + V
Sbjct: 272 VNSVVVSGDGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMC--VVGE 329
Query: 416 QIVSGSRDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRFSPNH--ANPIIVSCGWDRT 580
+ SGS DK+I LW T CK+ + GH V C++ SPN+ A ++ S G D++
Sbjct: 330 MVCSGSADKSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQASPNNVGAGFMLYSGGLDKS 388
Query: 581 VKVW 592
++VW
Sbjct: 389 LRVW 392
Score = 43.6 bits (98), Expect = 1e-04
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 5/224 (2%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L H G V+ +A ++ +LS+S+ K +IVW+ + + I K G S
Sbjct: 57 LSAHVGSVSSLALCGEF---LLSASQGKDIIVWQ----QPDLKIFAKFGQGDG---SVKA 106
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-----DHTKDVLSVAFSVDNRQIVSGSR 436
L S G+ + D +R+W ++ + F TKD L F + + +
Sbjct: 107 LVSVGSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLG-KFMKQSNYVQTRRN 165
Query: 437 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 616
K +LW I+ H+D +SC+ HA II S WD+T+KVW L++ K
Sbjct: 166 HK--RLW---------IE---HADSISCLAV---HAG-IIYSGSWDKTLKVWRLSDLKCL 207
Query: 617 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 748
+ H +N + V+ DG + S D K +W K + +
Sbjct: 208 ESIKAHDDAINGL-VAGDGRV-YSASADGKVKIWGKEKRKQIES 249
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); similiar to rab11 binding protein
(GI:4512103) [Bos taurus]
Length = 903
Score = 50.8 bits (116), Expect = 1e-06
Identities = 49/220 (22%), Positives = 102/220 (46%), Gaps = 10/220 (4%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
+L+GH + ++ + ++LSSS DKT+ +W + E + +L+ H+ +++ +
Sbjct: 501 SLKGHLDAILDLSWSKS--QLLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCI 552
Query: 269 VLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
S D NY LSGS D +R+W + + + D + V + ++ D + + GS
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGI 611
Query: 446 IKLWNTLAECK--YTIQDDGHSD-------WVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
+ ++T +CK T Q D S+ ++ +FSP + + ++V+ D +++
Sbjct: 612 CRAYDT-EDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSA-DSRIRILDG 669
Query: 599 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 718
+ K ++ + + S DG +D + LW
Sbjct: 670 SEVIHKFKGFRNTCSQLSASYSQDGKYIICASEDSQVYLW 709
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 403
P L GH I D+ S LS S DKT+RLWD+ KT + H V + FS
Sbjct: 498 PVCSLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFS 555
Query: 404 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 562
VD +SGS D I++W+ + ++ ++ + V+ ++P+ +I S
Sbjct: 556 PVDENYFLSGSLDAKIRIWS--IQDRHVVEWSDLHEMVTAACYTPDGQGALIGS 607
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 50.0 bits (114), Expect = 2e-06
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHS---HFISDVVLSSDGN-YALSGSWD 313
++ S+ DK + +W+ ++ + G +P G +S + S G+ Y SG
Sbjct: 57 VVASTGEDKKISLWR--KNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTG 114
Query: 314 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD 493
+ +++WDL ++ + HT + V ++ + + S S + + N + + T
Sbjct: 115 QIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELK 174
Query: 494 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPD 670
D + + + +S + ++V+ G D TV +W T K++ L HS V SP
Sbjct: 175 DPNGQVLRLLDYS-RSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPS 233
Query: 671 G-SLCASGGKDMKAMLWD 721
+ AS G D K +D
Sbjct: 234 NEKIIASVGMDKKLYTYD 251
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Frame = +2
Query: 536 NHANPIIVSCGWDRTVKVWHLTNCKL-KINHLGHSG------YLNTVTVSPDGS-LCASG 691
NH N ++ S G D+ + +W L + G G L+ ++ S GS SG
Sbjct: 52 NHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSG 111
Query: 692 GKDMKAMLWDL 724
G +WDL
Sbjct: 112 GTGQIVKIWDL 122
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 49.2 bits (112), Expect = 3e-06
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 7/139 (5%)
Frame = +2
Query: 65 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 244
S T+ RG GH V +A +P S D LI+W N +K
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDA 338
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAA---GKTTRRFEDHTKDVLSVAFSV 406
H + D N L+GS D T+RL+D L A G +FE H VL V +S
Sbjct: 339 DLHCVD--WNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSP 396
Query: 407 DNRQIV-SGSRDKTIKLWN 460
D + S + D + +W+
Sbjct: 397 DKSSVFGSSAEDGLLNIWD 415
Score = 41.1 bits (92), Expect = 8e-04
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Frame = +2
Query: 113 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGN 289
+T I T+ K I+ + + T ++E+ P+ +GH + DV S +
Sbjct: 253 ITTIGTDSKSSGSIIKQTGEGT------DKNESPTVGPRGVYHGHEDTVEDVAFSPTSAQ 306
Query: 290 YALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWN 460
S D L LWD G T+ + H D+ V ++ D+ I++GS D T++L++
Sbjct: 307 EFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFD 366
Query: 461 TLAECKYTIQD-----DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
+ +GH V CV++SP+ ++ + S D + +W
Sbjct: 367 RRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSS-VFGSSAEDGLLNIW 414
Score = 34.7 bits (76), Expect = 0.069
Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 12/219 (5%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI-------PQKRLYGHSHFI 259
H G V +I P+ ++ + + +++W + N + + P L GH
Sbjct: 163 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNA 222
Query: 260 S-DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
+ + + LSG DK++ LW + +DH + + + S + I+ +
Sbjct: 223 EFALAMCPTEPFVLSGGKDKSVVLWSI---------QDHITTIGTDSKS--SGSIIKQTG 271
Query: 437 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL---TNC 607
+ T K + + GH D V V FSP A S G D + +W TN
Sbjct: 272 EGTDKNESPTVGPRGVYH--GHEDTVEDVAFSPTSAQE-FCSVGDDSCLILWDARTGTNP 328
Query: 608 KLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 721
K+ H L+ V +P D +L +G D L+D
Sbjct: 329 VTKVEK-AHDADLHCVDWNPHDDNLILTGSADNTVRLFD 366
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/113 (23%), Positives = 52/113 (46%)
Frame = +2
Query: 113 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 292
++ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 293 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+G DK ++W L +G H +A+ +V+GS DKT+K
Sbjct: 88 VFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +2
Query: 503 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSP 667
+D +S + FSP I+V+ WD V+ W +T I + H +
Sbjct: 26 TDSISSLSFSPKA--DILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKD 83
Query: 668 DGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 763
DG+ +GG D +A +W L G T+ +D
Sbjct: 84 DGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHD 115
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +2
Query: 146 DMILSSSRDKTLIVWKLTRDENNYGIP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 322
+++ S + L +WKL E N K L H + D+ S D Y +SGS D +
Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 77
Query: 323 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 478
+WD+ G + + H V VA+ + + S S D+T +++ + K
Sbjct: 78 IIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQTK 129
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 662 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
SPD + SG D ++WD+N G LD
Sbjct: 62 SPDDAYLISGSVDNSCIIWDVNKGSVHQILD 92
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 48.8 bits (111), Expect = 4e-06
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 6/213 (2%)
Frame = +2
Query: 119 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL 298
++ T P + M+ SS K + ++ R+ N+ + K H+ +S + L +
Sbjct: 200 RVGTLPTFKSMVKSSVNPKHFM--EVRRNRNS--VKTK----HNDAVSSLSLDVELGLLY 251
Query: 299 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-- 472
S SWD T+++W +A K H + SV D+ + +GS D T+K+W +
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVWKRELQGK 310
Query: 473 -CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYL 646
K+T+ + + + I+ D V W + L GH +
Sbjct: 311 GTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAV 370
Query: 647 NTVTVSPDGSLCASGGKDMKAMLW--DLNDGKH 739
+ ++ G+L SG D +W D +D H
Sbjct: 371 LCLGIA--GNLLLSGSADKNICVWRRDPSDKSH 401
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
L GH+ + D+ S D + SGS D T+ +W++ G T H V V +
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGH 502
I S S DKT+ +W T ++ + DGH
Sbjct: 174 FIASQSDDKTVIIWRT-SDWGMAHRTDGH 201
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = +2
Query: 332 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 511
D+ K HT DV+ + +S D+ + SGS D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 512 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 634
V V + P I S D+TV +W ++ + GH
Sbjct: 163 VKGVTWDP--IGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/111 (27%), Positives = 45/111 (40%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 247
E K TLRGH V + +P M+ S S D T+ +W + G+ L GH
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 400
+ V G++ S S DKT+ +W + R + H L F
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTF 210
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 676
GH+ V + +SP+ + ++ S D TV +W++ GH + VT P GS
Sbjct: 116 GHTADVVDLNWSPDDS--MLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 677 LCASGGKDMKAMLWDLNDGKHLHTLD 754
AS D ++W +D H D
Sbjct: 174 FIASQSDDKTVIIWRTSDWGMAHRTD 199
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 602 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 733
N K + GH+ + + SPD S+ ASG D +W++ G
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTG 150
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); rab11 binding protein, Bos taurus,
EMBL:AF117897
Length = 905
Score = 48.4 bits (110), Expect = 5e-06
Identities = 43/199 (21%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 325
++LSSS DKT+ +W + +L+ H+ +++ V + D +Y +SGS D +R
Sbjct: 532 LLLSSSMDKTVRLWDIETQS------CLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK--YTIQDD- 496
+W++ + + + D + V +V ++ D + GS + +L++ +CK T Q D
Sbjct: 586 IWNI-SNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSA-EDCKLEQTNQIDL 643
Query: 497 -----GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTV 661
+ ++ +FSP + + ++V+ D ++V T K + T +
Sbjct: 644 QNKKKAQAKKITAFQFSPINPSEVLVTSA-DSRIRVLDGTELVQKFRGFKNMNSQMTASY 702
Query: 662 SPDGSLCASGGKDMKAMLW 718
+ D +D + +W
Sbjct: 703 TVDAKHIVCASEDSQVYVW 721
Score = 46.8 bits (106), Expect = 2e-05
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Frame = +2
Query: 206 ENNYGIPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 379
E + + K + + + DV+ LS S LS S DKT+RLWD+ + F H
Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFA-HND 560
Query: 380 DVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 556
V V F+ +D +SGS D I++WN + ++ + + V+ V ++P+ +
Sbjct: 561 YVTCVQFNPLDEDYFISGSLDAKIRIWN--ISNRQVVEWNDLKEMVTAVCYTPDGQAAFV 618
Query: 557 VSCGWDRTVKVWHLTNCKLK 616
S + +++ +CKL+
Sbjct: 619 GSI--NGHCRLYSAEDCKLE 636
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L HN +VT + NP D +S S D + +W ++ N + L ++ V
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS---NRQVVEWNDL---KEMVTAVC 608
Query: 272 LSSDGNYALSGSWDKTLRLW 331
+ DG A GS + RL+
Sbjct: 609 YTPDGQAAFVGSINGHCRLY 628
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
H G + T+ SPD L AS G+D +W++ +
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQE 442
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/118 (25%), Positives = 62/118 (52%)
Frame = +2
Query: 104 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 283
NG V Q+ + D++ + ++D +++VW+ + + P L GH+ ++ V L
Sbjct: 220 NGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFD-PAASLLGHT--LAVVSLYVG 276
Query: 284 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 457
N SG+ D ++++W L + + +HT V+S+ ++ ++S S D T+K+W
Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTVKIW 332
Score = 35.1 bits (77), Expect = 0.052
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = +2
Query: 359 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSP 535
+ + H K V +A + ++ + S+D+T+++W+ + +C + G V C+
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGE---VGCI---- 191
Query: 536 NHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 712
P ++ G VK W++ N L +N G G + ++ V D L +G +D +
Sbjct: 192 ISEGPWLL-VGMPNLVKAWNIQNNADLSLN--GPVGQVYSLVVGTD--LLFAGTQDGSIL 246
Query: 713 LWDLN 727
+W N
Sbjct: 247 VWRYN 251
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 355
+L GH ++ + L S + + S D+T+R+WD A+G+ T
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +2
Query: 371 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHAN 547
HT V+S+ V ++ SG+ D +IK+W+ +C T+ + H+ V S +
Sbjct: 266 HTLAVVSLY--VGANRLYSGAMDNSIKVWSLDNLQCIQTLTE--HTSVV----MSLICWD 317
Query: 548 PIIVSCGWDRTVKVWHLT---NCKLKINHLGHSGYL 646
++SC D TVK+W T N ++ H G L
Sbjct: 318 QFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVL 353
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 48.0 bits (109), Expect = 7e-06
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHTKDVLSVAF 400
GH+ + + S G SG D + +WD +A+ TR RFE+HT V ++A+
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 401 SVDNRQIVS---GSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 568
+++ G D IK WNT C +++ C ++ S G
Sbjct: 276 CPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV----CSLLWSKSERELLSSHG 331
Query: 569 WDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
+ + + +W + GH+ + + SPDG AS D LW++
Sbjct: 332 FTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Frame = +2
Query: 317 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 490
T+ LWD ++G T + ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 113 TVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTL 172
Query: 491 DDGHSDWVSCVRFSPNHANPIIVSCGWD-RTVKVWHLTNCKLKINHLGHSGYLNTVTVSP 667
GH V + ++ NH I+ + G D + V + +LGH+ + + S
Sbjct: 173 RGGHESRVGSLAWN-NH---ILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSE 228
Query: 668 DGSLCASGGKDMKAMLWD 721
G ASGG D +WD
Sbjct: 229 SGKKLASGGNDNVVHIWD 246
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 302 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 221 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 361
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 346 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 48.0 bits (109), Expect = 7e-06
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 9/173 (5%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 415
LYGH+ + V L + + +D +R+WD+ G + + + ++A D +
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALA--ADTK 215
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPI---------IVSCG 568
+V+G D I W +L + G + R H PI I S
Sbjct: 216 LLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLW-GHEGPITSLALDMTSIFSGS 274
Query: 569 WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
WD +V++W ++ K + L HS ++ + + +L ++ G D+ +WD++
Sbjct: 275 WDMSVRIWDRSSMKC-VKTLRHSDWVWGL-APHETTLASTSGSDV--YIWDVS 323
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 763
GH G + ++ + D + SG DM +WD + K + TL H+D
Sbjct: 255 GHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSD 297
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 48.0 bits (109), Expect = 7e-06
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Frame = +2
Query: 290 YALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
+ L+G D ++ LWD+ K T+ +F LSVA S D +SG D I ++N
Sbjct: 233 HVLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGG--ISGGADDKIVMYN 290
Query: 461 ---TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 631
+ C TI+ + + S I + GWD ++V++
Sbjct: 291 LNHSTGSC--TIRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKY 348
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
H N V+ SPD L AS +D LW L
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKL 379
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVA 397
P L GH H + DV + +GS D LR+WD + H++ VL+VA
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVA 68
Query: 398 FS--VDNRQIVSGSRDKTIKLWN 460
S + +I+S RD T+K W+
Sbjct: 69 ASPWLGEDKIISQGRDGTVKCWD 91
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/101 (22%), Positives = 44/101 (43%)
Frame = +2
Query: 155 LSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 334
+S D ++++ L + I +K + +S + DG A + WD +R+++
Sbjct: 278 ISGGADDKIVMYNLNHSTGSCTI-RKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYN 336
Query: 335 LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 457
G + H +V++S D + S S D T+ LW
Sbjct: 337 YRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 371 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHAN 547
H V+ V+F + +GS D +++W+T+ + ++ V V SP
Sbjct: 16 HRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWLGE 75
Query: 548 PIIVSCGWDRTVKVWHL 598
I+S G D TVK W +
Sbjct: 76 DKIISQGRDGTVKCWDI 92
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 47.6 bits (108), Expect = 9e-06
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 268
+L GH VT I + + ++ S+ D + VW + ++ + H+ + DV
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK---KVRAFLHHNAPVKDV 211
Query: 269 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQI-VSGSRDK 442
S G LS +D T RL+D+ G T+ F ED V V F DN + +SG
Sbjct: 212 KWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGV--VKFHPDNCNVFLSGGSKG 269
Query: 443 TIKLWNTLA 469
+++LW+ A
Sbjct: 270 SLRLWDIRA 278
Score = 46.4 bits (105), Expect = 2e-05
Identities = 54/228 (23%), Positives = 89/228 (39%), Gaps = 13/228 (5%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
K+R L HN V + + K +LS D T ++ + R + + G F
Sbjct: 197 KVRAFLH-HNAPVKDVKWS-KQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKF 254
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS- 433
D + N LSG +LRLWD+ A K + +L V F +Q +S S
Sbjct: 255 HPD-----NCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSD 309
Query: 434 ------RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+ + +W+ E + Q + C++ P +P+ ++ ++
Sbjct: 310 VSGRNISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQ--DPVFIAQSHGNYTAIFS 367
Query: 596 LTNCKLKINHL----GH--SGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
TN K+N GH +G+ SPDG ASG D ++D
Sbjct: 368 -TNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYD 414
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Frame = +2
Query: 371 HTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDW-VSCVRFSPNHA 544
HTK V ++ +S + ++ S D + +WN + K ++ H + V V++S
Sbjct: 159 HTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGL 218
Query: 545 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWD 721
+ ++SCG+D T +++ + ++ + V PD ++ SGG LWD
Sbjct: 219 S--LLSCGYDCTSRLFDVER-GVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWD 275
Query: 722 LNDGKHLH 745
+ K +H
Sbjct: 276 IRANKFVH 283
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 47.6 bits (108), Expect = 9e-06
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 10/171 (5%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFS 403
GH+ + + S G SG D + +WD LA+ TR RFE+HT V ++A+
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 404 VDNRQIVS---GSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 571
+++ G D I WNT C +++ V + +S + +
Sbjct: 294 PFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQ---VCSLLWSKSERELLSAHGFT 350
Query: 572 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
+ +W + GH+ + + SPDG AS D LW++
Sbjct: 351 QNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Frame = +2
Query: 317 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 490
T+ LWD ++ T++ +D V S+ ++ D + G + +++W+ ++
Sbjct: 131 TVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTL 190
Query: 491 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI--NHLGHSGYLNTVTVS 664
GH V + ++ NH I+ + G D + V + + I ++GH+ + + S
Sbjct: 191 RGGHESRVGSLAWN-NH---ILTTGGMDGKI-VNNDVRIRSSIIGTYVGHTEEVCGLKWS 245
Query: 665 PDGSLCASGGKDMKAMLWD 721
G ASGG D +WD
Sbjct: 246 ESGKKLASGGNDNVVHIWD 264
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 302 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 221 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 361
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 363 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 47.6 bits (108), Expect = 9e-06
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Frame = +2
Query: 359 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 538
+ H V +V F+ +VSGS D+ I LWN L+ + GH + V +F P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 539 HANPIIVSCGWDRTVKVWH-LTNCKLKINHLG-HSGYLNTVTVSP-DGSLCASGGKD 700
+ I++ G D V++ L N K++ LG H G + + V P D ++ S G+D
Sbjct: 110 TDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGED 166
Score = 44.0 bits (99), Expect = 1e-04
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 18/181 (9%)
Frame = +2
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAF--S 403
+L GH ++ V +S G+ +SGS D+ + LW+ +G + H ++V F
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 404 VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG-HSDWVSCVRFSPNHANPIIVSCGWDRT 580
D+R I++ D ++L L K + G H V + P N + SCG D
Sbjct: 110 TDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPN-VFYSCGEDGF 168
Query: 581 VKVWHL-TNCKLKI------------NHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLW 718
V+ + + +N + +H LN++ + P S A GG D A ++
Sbjct: 169 VQHFDIRSNSATMVLYSSPFTQGCRRHHSSSRIRLNSIAIDPRNSYYLAVGGSDEYARVY 228
Query: 719 D 721
D
Sbjct: 229 D 229
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 733
GH G +N V + G + SG D + MLW+ G
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 47.6 bits (108), Expect = 9e-06
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 6/174 (3%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
HS +S + L+ D S SWD+T+++W + K + H V SV + +
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVF 191
Query: 425 SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN-----HANPIIVSCGWDRTVKV 589
+GS D T+K+W K T HS + + ++ ++ + S D V
Sbjct: 192 TGSADGTVKVWKREIRGKRT----AHSLFQTLLKQESAVTALVTSHMAVYSGSSDGAVNF 247
Query: 590 WHLTNCK-LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 748
W + + K LK + L + ++ G L SG D K +W +GK +HT
Sbjct: 248 WEMGDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVW-RREGK-VHT 299
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 212 NYGIPQKRLYGHSHFISD--VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 385
++ PQ + + S S + ++SDG G D +++L KT H V
Sbjct: 2612 DWQFPQAQAFASSGIRSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPV 2671
Query: 386 LSVAFSVDNRQIVSGSRDKTIKLW 457
+A S DN +V+GSRD T+ LW
Sbjct: 2672 TCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 239 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 358
+GH ++ + LS D N+ ++GS D T+ LW + T+R
Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +2
Query: 572 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
D ++K+ K GH + + +SPD + +G +D +LW ++
Sbjct: 2647 DNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH 2698
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 65 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 196
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD----VLSVAFSVD 409
GHS ++ VV S + L+GS D T R+WD GK + K V S+A
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGS 258
Query: 410 NRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGH 502
+V G + K + LWN A EC TI H
Sbjct: 259 ESWLVCG-QGKNLALWNLPASECVQTIPIPAH 289
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 554 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 733
+ + D W + + K+K+ GHS YL+TV S +G +D A +WD G
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTG 233
Query: 734 KHLHTLDHND 763
K + + D
Sbjct: 234 KCVKVIGSQD 243
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +2
Query: 311 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 487
D WD+ +GK F+ H+ + +V QI++GS D T ++W+ +C I
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVI 239
Query: 488 QDDGHSDWVSCVRFSPN--HANPIIVSCGWDRTVKVWHL 598
G D S +R S + + CG + + +W+L
Sbjct: 240 ---GSQDKKSRLRVSSMALDGSESWLVCGQGKNLALWNL 275
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 46.8 bits (106), Expect = 2e-05
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 30/242 (12%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD---ENNYGIP--QKRLYGHSH 253
T R N ++ + +P L+SS D TL ++ L +D N YG+P ++ YG S
Sbjct: 46 TARNPNNFLKGLKWSPD-GSCFLASSEDNTLSLFHLPQDGGDSNGYGVPVPEEDSYGASL 104
Query: 254 FISD-----------VVLSSDGNYAL--SGSWDKTLRLWDLAAGK---TTRRFE--DHTK 379
+++ + SD + + + D + LWD +G+ T R ++ D
Sbjct: 105 LVNEGESVYDFCWYPYMSVSDPLTCVFATSTRDHPIHLWDSTSGELRCTYRAYDAMDEIT 164
Query: 380 DVLSVAFSVDNRQIVSG--SRDKTIKLWNTLAECKY--TIQD--DGHSDWVSCVRFSPNH 541
SV F+ D +I +G S + L + + T+Q +G + +S + FSP +
Sbjct: 165 AAFSVGFNPDGTKIFAGYNSSIRVFDLHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTN 224
Query: 542 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG-KDMKAMLW 718
+ + V + +T ++ N +L G G + V S DG+ +GG KD + W
Sbjct: 225 SGMLAVG-SYGQTTGIYREDNMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCW 283
Query: 719 DL 724
D+
Sbjct: 284 DI 285
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 29 RESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 208
R L +P + L+ G G ++ +A +P M+ S +T +++ E
Sbjct: 187 RVFDLHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNME 246
Query: 209 NNYGIPQKRLYGHSHFISDVVLSSDGNYALSGS-WDKTLRLWDL 337
Y L+G ++ V S DGNY +G D + WD+
Sbjct: 247 LLYV-----LHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDI 285
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 46.4 bits (105), Expect = 2e-05
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 5/183 (2%)
Frame = +2
Query: 239 YGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
+GHS + D+ S DG + +S S D L + G FE H V S +
Sbjct: 13 HGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNN 72
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
+ S S D + KLW+ L + H V FS + +++ G+++ ++V
Sbjct: 73 ALRAASASADFSAKLWDALT--GDVLHSFEHKHIVRACAFSQD--TKYLITGGFEKILRV 128
Query: 590 WHLTNCKLKINHLGHS-GYLNTVT-VSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 763
+ L + S G + T+T + D ++ +S LWD+ GK + TL+
Sbjct: 129 FDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLETKS 188
Query: 764 IIT 772
+T
Sbjct: 189 PVT 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/133 (25%), Positives = 55/133 (41%)
Frame = +2
Query: 320 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 499
+RLWD+ +GK + E + V S S D R I + T+K W+ A ++
Sbjct: 170 VRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWD--ANHFGLVKSYD 225
Query: 500 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 679
+ P N + G D V+++ K + GH G ++ V +P G
Sbjct: 226 MPCNIESASLEPKSGNKFVAG-GEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGES 284
Query: 680 CASGGKDMKAMLW 718
ASG +D +W
Sbjct: 285 YASGSEDGTIRIW 297
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 203 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 379
D N++G+ + Y I L GN ++G D +RL+D GK + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHG 271
Query: 380 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 463
V V F+ SGS D TI++W T
Sbjct: 272 PVHCVRFAPTGESYASGSEDGTIRIWQT 299
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 409
K+L GHS ++D SS+ Y S S DKT+R+W+L+ G R + V+
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVN 269
Query: 410 NRQIVSGSRDKTIKLWN 460
N + +G+ +K + ++N
Sbjct: 270 NNFLSAGNANKELTVFN 286
Score = 37.1 bits (82), Expect = 0.013
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Frame = +2
Query: 92 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 265
L GH+ VT ++N +Y I SSS DKT+ VW+L+R G+ + +YG S
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR-----GVCIRVIYGISPQYCI 263
Query: 266 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR--FEDHTKDVLSVAFSVDNRQIVSGSRD 439
+ N+ +G+ +K L +++ + G+ ++ FED +V S+ + I G
Sbjct: 264 RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFED---EVTSMDHDHTGQIIFCGDGQ 320
Query: 440 KTIKLWNTLAECKYTIQDDGHSDWVS-CVRFSPNHANPI 553
T+ Y++ D H+ +S R NH +P+
Sbjct: 321 GTV----------YSVSMDSHTGSLSRSHRHRTNHKSPV 349
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +2
Query: 428 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 601
G+ D ++ + + L E Q GHS V+ FS N N I S D+T++VW L+
Sbjct: 191 GASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSN--NQYIASSSLDKTIRVWELS 246
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNR 415
G S I+ V SS G+ ++ S D +RL+D + K R + H K +V S F+ D R
Sbjct: 172 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 231
Query: 416 QIVSGSRDKTIKLW 457
++S +D T+KLW
Sbjct: 232 FVLSSGKDSTVKLW 245
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Frame = +2
Query: 233 RLYGHSHFISDV---VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL-SVAF 400
R G++H S+V V + D + LS D T++LW++ +G+ + + + L S A
Sbjct: 210 RSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAI 269
Query: 401 SVDNRQIVSGSRDKT--IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
D + V + + + W+ K H+ + SP + V+CG D
Sbjct: 270 FNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSP--VESVFVTCGID 327
Query: 575 RTVKVW 592
R+++ W
Sbjct: 328 RSIRFW 333
Score = 41.1 bits (92), Expect = 8e-04
Identities = 34/176 (19%), Positives = 72/176 (40%), Gaps = 7/176 (3%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFS 403
+ Y H+ I+D+ +S + D ++ +D + R F+ T +V S++F
Sbjct: 78 RTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFH 137
Query: 404 VDNRQIVSGSRDKTIKLWNTLA-EC--KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
+++G+ L++ +C D G S ++ VR+S + I ++ D
Sbjct: 138 PSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGS--IYITASKD 195
Query: 575 RTVKVWH--LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 736
++++ C I + + + + D S GKD LW++ G+
Sbjct: 196 GAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGR 251
Score = 33.9 bits (74), Expect = 0.12
Identities = 34/167 (20%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
+++SS++D + + ++ +++ +H + + G + L+G+ L
Sbjct: 98 ILISSAKDNCIKFFDFSKTTAKRAF---KVFQDTHNVRSISFHPSGEFLLAGTDHPIPHL 154
Query: 329 WDLAAGKT--TRRFEDH--TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQD 493
+D+ + F D + + V +S ++ S+D I+L++ + A+C +I +
Sbjct: 155 YDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGN 214
Query: 494 -DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 631
G S+ S V F+ + ++S G D TVK+W + + ++ +LG
Sbjct: 215 AHGKSEVTSAV-FTKDQR--FVLSSGKDSTVKLWEIGSGRMVKEYLG 258
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNR 415
G S I+ V SS G+ ++ S D +RL+D + K R + H K +V S F+ D R
Sbjct: 264 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 323
Query: 416 QIVSGSRDKTIKLW 457
++S +D T+KLW
Sbjct: 324 FVLSSGKDSTVKLW 337
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Frame = +2
Query: 233 RLYGHSHFISDV---VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL-SVAF 400
R G++H S+V V + D + LS D T++LW++ +G+ + + + L S A
Sbjct: 302 RSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAI 361
Query: 401 SVDNRQIVSGSRDKT--IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
D + V + + + W+ K H+ + SP + V+CG D
Sbjct: 362 FNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSP--VESVFVTCGID 419
Query: 575 RTVKVW 592
R+++ W
Sbjct: 420 RSIRFW 425
Score = 41.1 bits (92), Expect = 8e-04
Identities = 34/176 (19%), Positives = 72/176 (40%), Gaps = 7/176 (3%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFS 403
+ Y H+ I+D+ +S + D ++ +D + R F+ T +V S++F
Sbjct: 170 RTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFH 229
Query: 404 VDNRQIVSGSRDKTIKLWNTLA-EC--KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
+++G+ L++ +C D G S ++ VR+S + I ++ D
Sbjct: 230 PSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGS--IYITASKD 287
Query: 575 RTVKVWH--LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 736
++++ C I + + + + D S GKD LW++ G+
Sbjct: 288 GAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGR 343
Score = 33.9 bits (74), Expect = 0.12
Identities = 34/167 (20%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
+++SS++D + + ++ +++ +H + + G + L+G+ L
Sbjct: 190 ILISSAKDNCIKFFDFSKTTAKRAF---KVFQDTHNVRSISFHPSGEFLLAGTDHPIPHL 246
Query: 329 WDLAAGKT--TRRFEDH--TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQD 493
+D+ + F D + + V +S ++ S+D I+L++ + A+C +I +
Sbjct: 247 YDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGN 306
Query: 494 -DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 631
G S+ S V F+ + ++S G D TVK+W + + ++ +LG
Sbjct: 307 AHGKSEVTSAV-FTKDQR--FVLSSGKDSTVKLWEIGSGRMVKEYLG 350
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 45.6 bits (103), Expect = 4e-05
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHTKDVLSVAF 400
GH+ + + S G SG + +WD +A+ K TR RFE+HT V ++A+
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Query: 401 SVDNRQIVS---GSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 568
+++ G D IK WNT C +++ C ++ S G
Sbjct: 307 CPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV----CSLLWSQRERELLSSHG 362
Query: 569 WDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 724
+ + + +W + GH+ + + SP+G AS D LW++
Sbjct: 363 FTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 415
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Frame = +2
Query: 317 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 490
T+ LWD ++G T+ ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 144 TVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTL 203
Query: 491 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI--NHLGHSGYLNTVTVS 664
GH V + ++ NH I+ + G D + V + + I +LGH+ + + S
Sbjct: 204 IGGHESRVGSLAWN-NH---ILTTGGMDGKI-VNNDVRIRSSIVGTYLGHTEEVCGLKWS 258
Query: 665 PDGSLCASGGKDMKAMLWD 721
G ASGG +WD
Sbjct: 259 ESGKKLASGGNYNVVHIWD 277
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 302 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 45.6 bits (103), Expect = 4e-05
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 30/237 (12%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVL 274
GH V + + Y I ++S D T+ K+T NN G Q L GH + +V
Sbjct: 9 GHEDIVHDVQMD-YYGKRIATASSDCTI---KITGVSNNGGSQQLATLTGHRGPVWEVAW 64
Query: 275 SSD--GNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDN--RQIVSGS 433
+ G+ S S+D + LW + F DH V S+A++ + + GS
Sbjct: 65 AHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGS 124
Query: 434 RDKTIKLWNTLAECKYTIQ--DDGHSDWVSCVRFSPNHA----------NPI--IVSCGW 571
D I ++ A+ + D H V+ V ++P A +P+ + S G
Sbjct: 125 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLASGGC 184
Query: 572 DRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPD----GSLCASGGKDMKAMLW 718
D TVKVW L N K++ H+ ++ V +P+ S ASG +D K ++W
Sbjct: 185 DNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIW 241
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/90 (31%), Positives = 39/90 (43%)
Frame = +2
Query: 494 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 673
DGHS V F P I +CG D V + K +H HS ++N + SPDG
Sbjct: 5 DGHSRRVLSCAFKPTRPFRI-ATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDG 63
Query: 674 SLCASGGKDMKAMLWDLNDGKHLHTLDHND 763
+ + D K M++D G + L D
Sbjct: 64 TKFITVSSDKKGMIYDGKTGDKVGELASED 93
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/185 (21%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Frame = +2
Query: 182 IVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 361
+VW++ +N YG + GH + + S AL S+D + L + G
Sbjct: 251 MVWRIPLTDNGYGAAEHVDIGHQPLDISIAVDSPEATALV-SFDSGVVLLN---GLNILS 306
Query: 362 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE--CKYTIQDDGHSDWVSCVRFSP 535
D V + S D ++ + G +D + +++ + K + H ++ +R+SP
Sbjct: 307 KIDLGFAVAASVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSP 366
Query: 536 NHANPIIVSCGWDRTVKVWHLTNCKLKINH-LGHSGYLNTVTVSPDGSLCASGGKDMKAM 712
+ + S +R VW ++K+N+ L H+ +N++ SP+ + A+G D +
Sbjct: 367 DLT--MFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVI 424
Query: 713 LWDLN 727
+++++
Sbjct: 425 VYEVD 429
Score = 41.5 bits (93), Expect = 6e-04
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Frame = +2
Query: 362 FEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 538
F+ H++ VLS AF +I + D + ++ K+ HS++V+C+R+SP+
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDG-PPFKFHSSHREHSNFVNCIRYSPD 62
Query: 539 HANPIIVSCGWDRTVKVWH-LTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDMKA 709
I VS D+ ++ T K+ + GH G + V+ SPD + D A
Sbjct: 63 GTKFITVSS--DKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSA 120
Query: 710 MLWDL-NDG 733
+W++ DG
Sbjct: 121 KVWEVAEDG 129
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--ED-HTKDVLSVAFSVDNR 415
HS+F++ + S DG ++ S DK ++D G ED H + +V++S D++
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 416 QIVSGSRDKTIKLW 457
++++ S DK+ K+W
Sbjct: 110 RVLTVSADKSAKVW 123
Score = 32.7 bits (71), Expect = 0.28
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 7/179 (3%)
Frame = +2
Query: 77 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 256
K + R H+ +V I +P I SS K +I T D+ + GH
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED---GHKGS 98
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAG-------KTTRRFEDHTKDVLSVAFSVDNR 415
I V S D L+ S DK+ ++W++A KT E + + V N
Sbjct: 99 IYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQND 158
Query: 416 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
+++ S T+ L++ K + GH V+ + + I+ SC +D + W
Sbjct: 159 HLITVSLGGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTIL-SCSYDGLIVKW 216
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 45.2 bits (102), Expect = 5e-05
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 5/189 (2%)
Frame = +2
Query: 221 IPQKRLYGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 391
IPQ +GHS + D+ S DG + +S S D L + G FE H V S
Sbjct: 8 IPQV-CHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS 66
Query: 392 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 571
+ + S S D + KLW+ L + H V FS + + +++ G+
Sbjct: 67 SCLDNNALRAASASADFSAKLWDALT--GDVLHSFEHKHIVRACAFSEDTKS--LLTGGF 122
Query: 572 DRTVKVWHLTNCKLKINHLGHS-GYLNTVT-VSPDGSLCASGGKDMKAMLWDLNDGKHLH 745
++ ++V+ + + S G + T+T + D ++ +S LWD+ GK +
Sbjct: 123 EKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQ 182
Query: 746 TLDHNDIIT 772
TL+ +T
Sbjct: 183 TLETKSPVT 191
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Frame = +2
Query: 320 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 499
+RLWD+ +GK + E + V S S D R I + T+K W+ A ++
Sbjct: 170 VRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWD--ANHFGLVKSYD 225
Query: 500 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGS 676
+ P + G D V+V+ T ++ N GH G ++ V +P G
Sbjct: 226 MPCNIESASLEPKSGEKFVAG-GEDMWVRVFDFYTGEEIGCNK-GHHGPVHCVRFTPTGL 283
Query: 677 LCASGGKDMKAMLW 718
ASG +D +W
Sbjct: 284 SYASGSEDGTIRIW 297
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 203 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 379
D N++G+ + Y I L G ++G D +R++D G+ + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHG 271
Query: 380 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 463
V V F+ SGS D TI++W T
Sbjct: 272 PVHCVRFTPTGLSYASGSEDGTIRIWQT 299
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 45.2 bits (102), Expect = 5e-05
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 5/189 (2%)
Frame = +2
Query: 221 IPQKRLYGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 391
IPQ +GHS + D+ S DG + +S S D L + G FE H V S
Sbjct: 8 IPQV-CHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS 66
Query: 392 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 571
+ + S S D + KLW+ L + H V FS + + +++ G+
Sbjct: 67 SCLDNNALRAASASADFSAKLWDALT--GDVLHSFEHKHIVRACAFSEDTKS--LLTGGF 122
Query: 572 DRTVKVWHLTNCKLKINHLGHS-GYLNTVT-VSPDGSLCASGGKDMKAMLWDLNDGKHLH 745
++ ++V+ + + S G + T+T + D ++ +S LWD+ GK +
Sbjct: 123 EKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQ 182
Query: 746 TLDHNDIIT 772
TL+ +T
Sbjct: 183 TLETKSPVT 191
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Frame = +2
Query: 320 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 499
+RLWD+ +GK + E + V S S D R I + T+K W+ A ++
Sbjct: 170 VRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWD--ANHFGLVKSYD 225
Query: 500 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGS 676
+ P + G D V+V+ T ++ N GH G ++ V +P G
Sbjct: 226 MPCNIESASLEPKSGEKFVAG-GEDMWVRVFDFYTGEEIGCNK-GHHGPVHCVRFTPTGL 283
Query: 677 LCASGGKDMKAMLW 718
ASG +D +W
Sbjct: 284 SYASGSEDGTIRIW 297
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 203 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 379
D N++G+ + Y I L G ++G D +R++D G+ + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHG 271
Query: 380 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 463
V V F+ SGS D TI++W T
Sbjct: 272 PVHCVRFTPTGLSYASGSEDGTIRIWQT 299
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 44.8 bits (101), Expect = 6e-05
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +2
Query: 377 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 553
+ ++ AFS D R + S D T+K+ + C + + WV VRF P+H+ I
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHPHHSE-I 163
Query: 554 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
+ S D V++W+ T + +HL + + ++ +G L A K +W N
Sbjct: 164 VASGSLDLEVRLWNTTTSECIRSHLFYRP-IASIAFHAEGELLAV-ASGHKLHMWHYN 219
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 44.8 bits (101), Expect = 6e-05
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS- 403
K+L H ++ V ++DG+ LSGS D+ + LWD F+ H ++ F
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Query: 404 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG-HSDWVSCVRFSPNHANPI-IVSCGWD 574
D+R IV+ + DK ++ L + G H V + P +P +CG D
Sbjct: 109 FSDDRTIVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEP--GSPFSFYTCGED 166
Query: 575 RTVKVWHL-----TN---CK-LKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDL 724
VK + L TN CK K N + YL+ + V P + L A G D A ++D+
Sbjct: 167 GAVKHFDLRTRVATNLFTCKEAKFNLV---VYLHAIAVDPRNPGLLAVAGMDEYARVYDI 223
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 44.8 bits (101), Expect = 6e-05
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 7/155 (4%)
Frame = +2
Query: 311 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLWNTLAECKYT 484
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSR 543
Query: 485 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT----VKVWHLTNCKLKINHLG-HSGYLN 649
+ D W + + +S + + SCG + + W+ + +K + G H L
Sbjct: 544 VDYDAPGRWCTTMAYSADGTR--LFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLG 601
Query: 650 TVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
V + + G D WD++ + L +D
Sbjct: 602 VVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAID 636
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 461 T 463
T
Sbjct: 948 T 948
Score = 33.5 bits (73), Expect = 0.16
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 314 KTLRLWDLAAGKTTRRFEDHTKDVLSV---AFSVDNRQIVSGSRDKTIKLWNTLA--ECK 478
KT ++WDL+ + + V+SV +S D ++L++ + +
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 479 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
++ D H V+ + FS + +++CG D+T+KVW + GH + +V
Sbjct: 454 QHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 250
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 251 HFISDVVLSSDGNYALSGSWDKTLRLWD 334
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 44.8 bits (101), Expect = 6e-05
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 7/155 (4%)
Frame = +2
Query: 311 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLWNTLAECKYT 484
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSR 543
Query: 485 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT----VKVWHLTNCKLKINHLG-HSGYLN 649
+ D W + + +S + + SCG + + W+ + +K + G H L
Sbjct: 544 VDYDAPGRWCTTMAYSADGTR--LFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLG 601
Query: 650 TVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
V + + G D WD++ + L +D
Sbjct: 602 VVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAID 636
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 461 T 463
T
Sbjct: 948 T 948
Score = 33.5 bits (73), Expect = 0.16
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 314 KTLRLWDLAAGKTTRRFEDHTKDVLSV---AFSVDNRQIVSGSRDKTIKLWNTLA--ECK 478
KT ++WDL+ + + V+SV +S D ++L++ + +
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 479 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
++ D H V+ + FS + +++CG D+T+KVW + GH + +V
Sbjct: 454 QHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 250
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 251 HFISDVVLSSDGNYALSGSWDKTLRLWD 334
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 290 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 469
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 151
Query: 470 E-CKYTIQDDG 499
E C+ ++ G
Sbjct: 152 EKCQGLLRVQG 162
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Frame = +2
Query: 362 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 538
F D+ + S+ F + +V+ S D +I+L++ A C TI + V V F+ +
Sbjct: 29 FRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYG--VDLVCFT-S 85
Query: 539 HANPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 712
H +I S GWD ++++ L + K GH + ++++ G SG D +
Sbjct: 86 HPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVL 145
Query: 713 LWD 721
LWD
Sbjct: 146 LWD 148
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 140 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 310
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 86 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 140
Query: 311 DKTLRLWD 334
D+T+ LWD
Sbjct: 141 DRTVLLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 290 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 469
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 148
Query: 470 E-CKYTIQDDG 499
E C+ ++ G
Sbjct: 149 EKCQGLLRVQG 159
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Frame = +2
Query: 362 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 538
F D+ + S+ F + +V+ S D +I+L++ A C TI + V V F+ +
Sbjct: 26 FRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYG--VDLVCFT-S 82
Query: 539 HANPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 712
H +I S GWD ++++ L + K GH + ++++ G SG D +
Sbjct: 83 HPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVL 142
Query: 713 LWD 721
LWD
Sbjct: 143 LWD 145
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 140 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 310
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 83 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 137
Query: 311 DKTLRLWD 334
D+T+ LWD
Sbjct: 138 DRTVLLWD 145
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/147 (21%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +2
Query: 65 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 244
+++L + + H G V +A + ++ + S D+ L++W L + P + +
Sbjct: 214 NKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK--PVQSVVA 271
Query: 245 HSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDNRQ 418
HS ++ + + + + +GS DKT++L+DL T F+ H ++V V ++ N
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNET 331
Query: 419 IV-SGSRDKTIKLWN-TLAECKYTIQD 493
I+ S + + +W+ + + + T++D
Sbjct: 332 ILASCCLGRRLMVWDLSRIDEEQTVED 358
Score = 39.5 bits (88), Expect = 0.002
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 18/227 (7%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI-----PQKRLYGHSHFISD 265
H+G V + P+ P +I + + + + V+ ++ + + P +L GHS
Sbjct: 124 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYG 183
Query: 266 VVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRR------FEDHTKDVLSVAFSVDNRQIV 424
+ S + LSGS D + LWD+ A + F+ H V VA+ + + +
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243
Query: 425 -SGSRDKTIKLWNTLA-ECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCG-WDRTVKVW 592
S D+ + +W+ + +Q HS V+C+ F+P N +V+ G D+TVK++
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNP--FNEWVVATGSTDKTVKLF 301
Query: 593 HLTNCKLKINHL-GHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLN 727
L ++ H + V +P + ++ AS + M+WDL+
Sbjct: 302 DLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI------PQKRLY--- 241
T H V Q+ NPK ++ S + L+VW L+R + + P + L+
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHG 371
Query: 242 GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 340
GH+ ISD + ++ +S + D L++W +A
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 311 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 490
D +RL+D+ K R F HT + + FS D + ++S S D ++++W+ + +
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQI--- 592
Query: 491 DDGHSDW-VSCVRFSPN 538
D H D ++ + SPN
Sbjct: 593 DGVHVDVPITALSLSPN 609
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Frame = +2
Query: 215 YGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 394
+ + +KR Y H + V S +S + L++WD + ++ D ++ +
Sbjct: 463 FDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQW-DVGCSLVKI 521
Query: 395 AFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 574
+ N + + + D I+L++ + K + GH+D ++ + FS + ++S D
Sbjct: 522 VYHRVNGLLATVADDFVIRLYDVVT-LKMVREFRGHTDRITDLCFSED--GKWVISSSMD 578
Query: 575 RTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM-LW 718
++++W + K +I+ + + +++SP+ + A+ D + LW
Sbjct: 579 GSLRIWDVILAK-QIDGVHVDVPITALSLSPNMDVLATAHSDQNGVYLW 626
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 8/178 (4%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED--------HTKDVLSVAFSVDN 412
I +S+ GN+A+ G+ + ++L +G + + D H +V+ VA N
Sbjct: 427 IKACAISACGNFAVVGTAGGWIERFNLQSGISRGSYFDMSEKRRYAHDGEVIGVACDSTN 486
Query: 413 RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
++S +K+W+ + D G S V+ + N ++ + D ++++
Sbjct: 487 TLMISAGYHGDLKVWDFKKRELKSQWDVG----CSLVKIVYHRVNGLLATVADDFVIRLY 542
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDI 766
+ K+ GH+ + + S DG S D +WD+ K + + H D+
Sbjct: 543 DVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGV-HVDV 599
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 44.0 bits (99), Expect = 1e-04
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Frame = +2
Query: 194 LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 373
+ D + P L G S S S + S ++D +++WD+A + ++H
Sbjct: 566 IVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEH 625
Query: 374 TKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 550
K V S+ S D + SGS D T TI+ + V CV+F P+ +
Sbjct: 626 KKRVWSIDISSADPTLLASGSDDGT-------GVSIGTIKTKAN---VCCVQF-PSDSGR 674
Query: 551 IIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
+ D V + L N K+ + +GHS ++ V D S S D LWDL+
Sbjct: 675 SLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWDLS 733
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 89 TLRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFI 259
T+ GH+ V+ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 260 SDVVLSSDGNYALSGS 307
+ V LS Y +GS
Sbjct: 755 NFVGLSVSDGYIATGS 770
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/112 (29%), Positives = 53/112 (47%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
IS++ S++ ++ L SWDK +RL+D++ F H VL F D G+
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFL-HGGAVLDCCFHDDFSGFSVGAD 78
Query: 437 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
K ++ + K I H V CV +S +A +++ WD+TVK W
Sbjct: 79 YKVRRIVFNVG--KEDILGT-HDKAVRCVEYS--YAAGQVITGSWDKTVKCW 125
Score = 32.7 bits (71), Expect = 0.28
Identities = 35/181 (19%), Positives = 72/181 (39%), Gaps = 14/181 (7%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRRFEDHTKDVLSVAFSVDNRQ 418
H + V S ++GSWDKT++ WD A+G + + + + S+ +
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHR 156
Query: 419 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDW-VSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+V + + + +++ + + + + CVR PN + S ++ +
Sbjct: 157 LVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFD 216
Query: 596 LTNC------KLKINHLGHSGY-----LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 742
L+ K + +G +N++ P A+GG D +WD N+ K L
Sbjct: 217 LSEAAQAKKYAFKCHRKSEAGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRL 276
Query: 743 H 745
+
Sbjct: 277 Y 277
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 197 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 376
T EN + H + I D+ + L+ S D+T+++WD+ K T HT
Sbjct: 111 THQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHT 170
Query: 377 KDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 460
V S+ N +VSGSRD LW+
Sbjct: 171 GTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 39.9 bits (89), Expect = 0.002
Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 35/256 (13%)
Frame = +2
Query: 68 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------RDE---NNYG 220
E K G L GH G V + ++P D+++S SRD +W L ++E N+ G
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLRCKSSSHKEEFCINSTG 217
Query: 221 IP------------QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT---- 352
+ ++R S S + + + A +G+ D L+ WD+ K
Sbjct: 218 MVKGAHLSPLSKRIRRRKAASSSITSVLYVKDEITIATAGAPDSALKFWDIRKLKAPFAQ 277
Query: 353 -------TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSD 508
T E + ++S++ + + +D I L+NTL K +Q G
Sbjct: 278 ASPQSDPTNTKEKRSHGIVSLSQDSSGTYLTASCKDNRIYLYNTLRLDKGPVQSFSGCRI 337
Query: 509 WVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL-KINHLGHSGYLNTVTVSP-DGSLC 682
VR + ++S D +W + ++ I GH + V SP +
Sbjct: 338 DSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKV 397
Query: 683 ASGGKDMKAMLWDLND 730
A+ D LW++ +
Sbjct: 398 ATASDDFTVRLWNIEN 413
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 554 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDL 724
+++ D+T+KVW + K +GH+G + ++ P S L SG +D LWDL
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 328
+L++S D+T+ VW + ++ G+ L GH+ + + ++ + +SGS D L
Sbjct: 143 LLTASGDQTIKVWDVEENKCT-GV----LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFAL 197
Query: 329 WDLAAGKTTRRFE 367
WDL ++ + E
Sbjct: 198 WDLRCKSSSHKEE 210
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +2
Query: 227 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAF- 400
++ L GH ++ + +S+G+ +SGS D + +W+ ++ K + HT ++ F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 401 -SVDNRQIVSGSRDKTIKLWNT 463
+ +VSG+ D ++L+NT
Sbjct: 103 PETSDELVVSGAGDAEVRLFNT 124
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
GH G +N + + +GSL SG D++ +W+ + K LH++D
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSID 89
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +2
Query: 221 IPQKRLY-GHSHFISDV----VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 385
I KR Y GH + +D+ L G Y SGS D +W+ G+ + +
Sbjct: 607 IDMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVL 666
Query: 386 LSVAFSVDNRQIVSGSRDKTIKLWNTLA 469
+ + + + D TIK+W+ A
Sbjct: 667 NCIQCHPFDSVVATSGIDNTIKIWSPTA 694
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +2
Query: 386 LSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD----GHSDWVSCVRFSPNHANP 550
LSV +S D ++I SGS D I+ W+ T Y I G S + CV +
Sbjct: 202 LSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEI-CVWSLLSLRCS 260
Query: 551 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
++VS TV+ W + L H H G +NT+ +P + S G D + +L+ L+
Sbjct: 261 VLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLS 319
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.7 bits (96), Expect = 3e-04
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Frame = +2
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVD 409
RL GH I +V S DG+ +S S D++ R+W++ + + H+ V S
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS-- 287
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVK 586
+ IV+ D T ++W I++ G W C+ + PN + ++V+ G+D +K
Sbjct: 288 DSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIW-RCL-YDPN--SSLLVTAGFDSAIK 343
Query: 587 VWHLTN 604
V L N
Sbjct: 344 VHQLHN 349
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.7 bits (96), Expect = 3e-04
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Frame = +2
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVD 409
RL GH I +V S DG+ +S S D++ R+W++ + + H+ V S
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS-- 287
Query: 410 NRQIVSGSRDKTIKLWNTLAECKYTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVK 586
+ IV+ D T ++W I++ G W C+ + PN + ++V+ G+D +K
Sbjct: 288 DSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIW-RCL-YDPN--SSLLVTAGFDSAIK 343
Query: 587 VWHLTN 604
V L N
Sbjct: 344 VHQLHN 349
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +2
Query: 242 GHSHFISDVVLSSDG----NYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSV 406
GHS ++ + SSD + S S D T+R WD + + R + + +++ S ++
Sbjct: 81 GHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGG 140
Query: 407 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 556
+++G + + LW+ + ++ H D V+ V F PN N ++
Sbjct: 141 AADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQVHFVPNKPNKLL 190
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 42.7 bits (96), Expect = 3e-04
Identities = 33/112 (29%), Positives = 55/112 (49%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
IS++ S++ ++ L SWDK++RL+D A G R H VL F D+ S
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFH-DDSSGFSVCA 76
Query: 437 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
D ++ + A + + H V CV +S +A +++ WD+T+K W
Sbjct: 77 DTKVRRIDFNAGKEDVL--GTHEKPVRCVEYS--YAAGQVITGSWDKTIKCW 124
Score = 36.7 bits (81), Expect = 0.017
Identities = 33/105 (31%), Positives = 48/105 (45%)
Frame = +2
Query: 146 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 325
D +L SS DK++ ++ D N G + + H + D D + S D +R
Sbjct: 29 DHLLVSSWDKSVRLY----DAN--GDLMRGEFKHGGAVLDCCFHDDSS-GFSVCADTKVR 81
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
D AGK H K V V +S Q+++GS DKTIK W+
Sbjct: 82 RIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 34.7 bits (76), Expect = 0.069
Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 15/200 (7%)
Frame = +2
Query: 191 KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 370
K+ R + N G + L H + V S ++GSWDKT++ WD T R +
Sbjct: 79 KVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTERTQI 137
Query: 371 HT---KDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 538
T + ++ V NR +V + R I +++ + ++ CVR PN
Sbjct: 138 GTYMQPERVNSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQR-RESSLKYQTRCVRCYPN 196
Query: 539 HANPIIVSCGWDRTVKVWHLTNC------KLKINHLGHSGY-----LNTVTVSPDGSLCA 685
+ S +++ + L+ K + G +N + P A
Sbjct: 197 GTGYALSSVEGRVSMEFFDLSEAAQAKKYAFKCHRKSEDGRDIVYPVNAIAFHPIYGTFA 256
Query: 686 SGGKDMKAMLWDLNDGKHLH 745
SGG D +WD N+ K L+
Sbjct: 257 SGGCDGFVNIWDGNNKKRLY 276
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +2
Query: 374 TKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAEC-KYTIQDDGHSDWVS-CVRFSPNH 541
T LSV +S D ++I SGS D I+ W N E + T+ G + C+ +
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGSELCIWSLLSL 257
Query: 542 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 721
++VS +V+ W + L H H G +N + SP + S G D + +L+
Sbjct: 258 RYGVLVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYK 317
Query: 722 LNDG 733
L+ G
Sbjct: 318 LSGG 321
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 41.9 bits (94), Expect = 5e-04
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 6/159 (3%)
Frame = +2
Query: 263 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFS-VDNRQIVSGS 433
D L + SGS D T+++WD G T + SV F I G
Sbjct: 173 DYTLYNGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGC 232
Query: 434 RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 613
D+ +++ I DGH+ V+ RF +H IV+ D ++K W + N +
Sbjct: 233 ADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHT---IVTGSTDGSLKQWDIDNGRR 289
Query: 614 KI-NHLGHSGYLNTVTVS--PDGSLCASGGKDMKAMLWD 721
+ + GH N V +S G L SG ++ + ++D
Sbjct: 290 VVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYD 328
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 41.9 bits (94), Expect = 5e-04
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Frame = +2
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 463
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ + +
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDG 338
Query: 464 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL------TNCKLKINH 625
+ SD V + + P+ + +VS D TVK + + ++ L +
Sbjct: 339 RQPSHSGFKWSVMSD-VESLAWDPHCEHSFVVSLE-DGTVKGFDIRAAQSGSDSDLNPTY 396
Query: 626 L--GHSGYLNTVTVSPDGS---LCASGGKDMKAMLWDLNDGK 736
H+ ++S + S L A+G D LWDL++ +
Sbjct: 397 TIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNE 438
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 278 SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTI 448
S N +GS DK+++LWDL+ + + + + V S++F+VDN +++ G +
Sbjct: 415 STPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGEL 474
Query: 449 KLWNTLAE 472
+W+TL +
Sbjct: 475 HVWDTLLD 482
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 41.9 bits (94), Expect = 5e-04
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 7/155 (4%)
Frame = +2
Query: 311 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLWNTLAECKYT 484
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW-LYDNMGSR 543
Query: 485 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT----VKVWHLTNCKLKINHLG-HSGYLN 649
+ + W + + +S + + SCG + + W+ + +K + G H L
Sbjct: 544 VDYEAPGRWCTTMAYSADGTR--LFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLG 601
Query: 650 TVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
V + + G D WD++ + L +D
Sbjct: 602 VVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAID 636
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 461 T 463
T
Sbjct: 937 T 937
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Frame = +2
Query: 314 KTLRLWDLAAGKTTRRFEDHTKDVLSV---AFSVDNRQIVSGSRDKTIKLWNTLA--ECK 478
KT ++WDL+ + + V+SV +S D ++L++ + +
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 479 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 634
++ D H V+ + FS + + +CG D+T+KVW + GH
Sbjct: 454 QHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 250
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 251 HFISDVVLSSDGNYALSGSWDKTLRLWD 334
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 41.9 bits (94), Expect = 5e-04
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 7/155 (4%)
Frame = +2
Query: 311 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLWNTLAECKYT 484
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW-LYDNMGSR 543
Query: 485 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT----VKVWHLTNCKLKINHLG-HSGYLN 649
+ + W + + +S + + SCG + + W+ + +K + G H L
Sbjct: 544 VDYEAPGRWCTTMAYSADGTR--LFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLG 601
Query: 650 TVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
V + + G D WD++ + L +D
Sbjct: 602 VVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAID 636
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 461 T 463
T
Sbjct: 937 T 937
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Frame = +2
Query: 314 KTLRLWDLAAGKTTRRFEDHTKDVLSV---AFSVDNRQIVSGSRDKTIKLWNTLA--ECK 478
KT ++WDL+ + + V+SV +S D ++L++ + +
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 479 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 634
++ D H V+ + FS + + +CG D+T+KVW + GH
Sbjct: 454 QHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 71 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 250
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 251 HFISDVVLSSDGNYALSGSWDKTLRLWD 334
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 41.5 bits (93), Expect = 6e-04
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Frame = +2
Query: 143 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-----SGS 307
PD++ +SS L +W+++ DE+ + + S + S D N A + S
Sbjct: 98 PDLLATSS--DFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSS 155
Query: 308 WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 487
D T +WD+ + H K+V +A+ S S D ++++++ + TI
Sbjct: 156 IDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG-GVGVFASVSEDGSVRVFDLRDKEHSTI 214
Query: 488 QDDGHSDWVSCVRFSPNHANP---IIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTV 655
+ VR S N +P V G + V V + L + L H +N +
Sbjct: 215 IYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIV-VLDIRFPALPVVELQRHQASVNAI 273
Query: 656 TVSPDGS--LCASGGKDMKAMLWDLND-GKHL 742
+P S +C S G D +A++WD++ G+H+
Sbjct: 274 AWAPHSSSHIC-SAGDDSQALIWDISSMGQHV 304
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 41.1 bits (92), Expect = 8e-04
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 7/133 (5%)
Frame = +2
Query: 83 RGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS 262
RG GH V +A P S D L++W + +K H +
Sbjct: 274 RGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVD 333
Query: 263 DVVLSSDGNYALSGSWDKTLRLWDL------AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
D N L+GS D T+R++D G +FE H VL V +S D +
Sbjct: 334 --WNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVF 391
Query: 425 -SGSRDKTIKLWN 460
S + D + +W+
Sbjct: 392 GSSAEDGLLNIWD 404
Score = 31.9 bits (69), Expect = 0.49
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 14/221 (6%)
Frame = +2
Query: 101 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY---GIPQKR----LYGHSHFI 259
H G V +I P+ ++ + + +++W + Y G P R L GH
Sbjct: 152 HPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDA 211
Query: 260 S-DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIVSG 430
+ + + LSG DK++ LW++ +DH S + S + +Q G
Sbjct: 212 EFALAMCPTEPFVLSGGKDKSVILWNI---------QDHITMAGSDSKSPGSSFKQTGEG 262
Query: 431 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL---T 601
S DKT + I +GH D V V F P+ A S G D + +W T
Sbjct: 263 S-DKT----GGPSVGPRGIY-NGHKDTVEDVAFCPSSAQE-FCSVGDDSCLMLWDARTGT 315
Query: 602 NCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 721
+ +K+ H L+ V +P D +L +G D ++D
Sbjct: 316 SPAMKVEK-AHDADLHCVDWNPHDNNLILTGSADNTVRVFD 355
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/197 (20%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Frame = +2
Query: 41 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 214
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 215 YGIPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTK 379
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
Query: 380 DVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 556
V+++ + D+ +++ ++D W+T + + ++W V + P +I
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDT-NTAEIVAELPAGNNWNFDVHWYPKIPG-VI 322
Query: 557 VSCGWDRTVKVWHLTNC 607
+ +D + ++++ C
Sbjct: 323 SASSFDGKIGIYNIEGC 339
Score = 36.3 bits (80), Expect = 0.023
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 8/186 (4%)
Frame = +2
Query: 80 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS--H 253
L G L H G V + N +++ S + D + +W L + P + G +
Sbjct: 114 LVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQG 173
Query: 254 FISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIV 424
IS + + L S S++ T +WDL K F D + SV N QI+
Sbjct: 174 EISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 425 SGSRD---KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
S D T+KLW+ + GH V + + P+ ++ +++C D W
Sbjct: 234 VASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSS-YLLTCAKDNRTICWD 292
Query: 596 LTNCKL 613
++
Sbjct: 293 TNTAEI 298
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/197 (20%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Frame = +2
Query: 41 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 214
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 215 YGIPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTK 379
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
Query: 380 DVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 556
V+++ + D+ +++ ++D W+T + + ++W V + P +I
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDT-NTAEIVAELPAGNNWNFDVHWYPKIPG-VI 322
Query: 557 VSCGWDRTVKVWHLTNC 607
+ +D + ++++ C
Sbjct: 323 SASSFDGKIGIYNIEGC 339
Score = 36.3 bits (80), Expect = 0.023
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 8/186 (4%)
Frame = +2
Query: 80 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS--H 253
L G L H G V + N +++ S + D + +W L + P + G +
Sbjct: 114 LVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQG 173
Query: 254 FISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIV 424
IS + + L S S++ T +WDL K F D + SV N QI+
Sbjct: 174 EISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 425 SGSRD---KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
S D T+KLW+ + GH V + + P+ ++ +++C D W
Sbjct: 234 VASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSS-YLLTCAKDNRTICWD 292
Query: 596 LTNCKL 613
++
Sbjct: 293 TNTAEI 298
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAF 400
P L GH I+ + +S+D + +SGS D T L G+ R + + +S +A
Sbjct: 1103 PSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSGSAVSKLAA 1162
Query: 401 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 580
S R ++ G D ++ L++ + + + +G ++C+ S +VS G
Sbjct: 1163 SHHGRIVLYGDDDLSLHLYSINGKHLASSESNGR---INCLELS--KCGEFLVSAGDQGQ 1217
Query: 581 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 739
+ V + ++ + G + ++TV+ + A G KD +++ + + +H
Sbjct: 1218 IIVRSMNTLEVVKRYNGAGKIITSLTVTQEECFLA-GTKDGALLVYSIENPQH 1269
Score = 35.9 bits (79), Expect = 0.030
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
H +S V +++D +GS+D T+ +WD+ +T K V + V + IV
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPE------KRVRNTHAEVLRKDIV 1098
Query: 425 SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 604
I C GH D ++C+ S + I++S D T V+H
Sbjct: 1099 IADAPSHIL-------C-------GHDDIITCLYVSTD--LDIVISGSKDGTC-VFHTLR 1141
Query: 605 CKLKINHLGH-SG-YLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 760
I L H SG ++ + S G + G D+ L+ +N GKHL + + N
Sbjct: 1142 EGRYIRSLKHPSGSAVSKLAASHHGRIVLYGDDDLSLHLYSIN-GKHLASSESN 1194
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Frame = +2
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFED---HTKDVLSVAF 400
R H ++ + ++DG Y LS D +RLWD+ +G+ T FE T + +
Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDT 366
Query: 401 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 580
S D+ +V KT+K + + + T+ GH + V+ F+ N + + G DR
Sbjct: 367 S-DDPALVFVPCMKTVKAFG-MWSGRTTLMLRGHYESVNTCCFNSNDQE--LYTSGSDRQ 422
Query: 581 VKVW 592
+ VW
Sbjct: 423 ILVW 426
Score = 31.9 bits (69), Expect = 0.49
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = +2
Query: 101 HNGWVTQI-ATNPKYPDMILSSSRDKTLIVWKLTRDENNY-GIPQKRLYGHSHFISDVVL 274
H G VT + ATN +LS+ D + +W + N R+ + D
Sbjct: 311 HYGAVTGLKATNDGM--YLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLD--- 365
Query: 275 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 454
+SD + KT++ + + +G+TT H + V + F+ +++++ + D+ I +
Sbjct: 366 TSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILV 425
Query: 455 WN 460
W+
Sbjct: 426 WS 427
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 739
H G + + + DG S G D + LWD+ G++
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 15/180 (8%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS- 403
K+L H ++ V +++G+ +SGS D+ + LWD G F H +V F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 404 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG-HSDWVSCVRFSPNHANPIIVSCGWD- 574
D+R IV+ + D ++ + L K G H + P + + I +CG D
Sbjct: 113 FSDDRTIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPH-IFYTCGEDG 171
Query: 575 -------RTVKVWHLTNCKLKINHLGHSG--YLNTVTVSP-DGSLCASGGKDMKAMLWDL 724
RT L C+ + LN + + P + +L A GG + A L+D+
Sbjct: 172 LVQRFDLRTEAPTELFTCRSVDPRRRNMDAIQLNAIAIDPRNSNLFAVGGMEEYARLYDI 231
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 146 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG-----HSHFISDVVLSSDGNYALSGSW 310
D++++SS D +L ++ + + I + +G +H S ++ SS N +G
Sbjct: 37 DLLVTSSEDDSLRLFDIA-NAKQLKITYHKKHGTDRVCFTHHPSSLICSSRYNLESTGES 95
Query: 311 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
+ L ++D + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 96 LRYLSMYD---NRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 34.3 bits (75), Expect = 0.091
Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 4/211 (1%)
Frame = +2
Query: 140 YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY-GHSHFISDVVLSSDGNYALSGSWDK 316
+P ++ SSR + R + Y R + GH + + +S + +SGS D+
Sbjct: 77 HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136
Query: 317 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK---YTI 487
++RLWDL H + +VA+ +KL+++ K T
Sbjct: 137 SVRLWDLRVNACQGIL--HLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTF 194
Query: 488 QDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP 667
G + V+ ++FS + + ++ + + V + K + G T +P
Sbjct: 195 LVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTP 254
Query: 668 DGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 760
DG SG D W++ + + ++N
Sbjct: 255 DGKYVLSGSGDGTLHAWNIENPSEVARWENN 285
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 263 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 433
+ + DG Y LSGS D TL W++ R+E++ V + ++ V+ S
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS 305
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLW 457
D + +SG D ++ WD+A H V S V++ +V+GS D T+K+W
Sbjct: 147 DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
Query: 458 NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
+ I + H V V + P + +I + G +VKVW L
Sbjct: 207 DARVHTSNWIAEINHGLPVEDVVYLP--SGGLIATAG-GNSVKVWDL 250
Score = 37.9 bits (84), Expect = 0.007
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
L GH +V +P M+++ S D T+ VW +N+ I + H + DVV
Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW-IAE---INHGLPVEDVV 229
Query: 272 -LSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSV 394
L S G A +G ++++WDL GK E H K V S+
Sbjct: 230 YLPSGGLIATAGG--NSVKVWDLIGGGKMVCSMESHNKTVTSL 270
Score = 34.7 bits (76), Expect = 0.069
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Frame = +2
Query: 290 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAFSVDNRQIVSGSRDKTIKLWNTL 466
++L+ + T+ L+ + ++RRF +DV+S V F D + +++++ +
Sbjct: 66 HSLAVAHSATVSLFSSQSLSSSRRFS--FRDVVSSVCFRSDGALFAACDLSGVVQVFD-I 122
Query: 467 AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL 646
E HS V++ P +VS G D VK W + + + LGH Y+
Sbjct: 123 KERMALRTLRSHSAPARFVKY-PVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYV 181
Query: 647 NTVTVSP-DGSLCASGGKDMKAMLWD 721
SP + S+ +G D +WD
Sbjct: 182 RCGDCSPVNDSMLVTGSYDHTVKVWD 207
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/136 (25%), Positives = 57/136 (41%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS- 73
Query: 437 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 616
D I+ ++ A TI H D + + +S + ++S G+D +K W +
Sbjct: 74 DGFIRRYDLNAGTVDTI--GRHDDISTSIVYS--YEKGEVISTGFDEKIKFWDTRQRESL 129
Query: 617 INHLGHSGYLNTVTVS 664
+ G + VTVS
Sbjct: 130 VFSTDAGGAVGCVTVS 145
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/136 (25%), Positives = 57/136 (41%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 436
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS- 73
Query: 437 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 616
D I+ ++ A TI H D + + +S + ++S G+D +K W +
Sbjct: 74 DGFIRRYDLNAGTVDTI--GRHDDISTSIVYS--YEKGEVISTGFDEKIKFWDTRQRESL 129
Query: 617 INHLGHSGYLNTVTVS 664
+ G + VTVS
Sbjct: 130 VFSTDAGGAVGCVTVS 145
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFEDHTKDVLSVAFSV 406
L H + + V S+ G Y + S D T +W D + E H V V++S
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSP 279
Query: 407 DNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 583
D+ ++++ + +KLW+ ++T ++ VS + P+ + S +R +
Sbjct: 280 DDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGI 339
Query: 584 KVWHLTNCKLKINHLGHSGYLNTVTVSPDG 673
+W ++K + + V+PDG
Sbjct: 340 VMWDTDGNEIKAWRGTRIPKVVDLAVTPDG 369
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 457
D ++ SGS D + +W+L K H+ V V+++ N R + S S D+TI++W
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 34.7 bits (76), Expect = 0.069
Identities = 48/236 (20%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Frame = +2
Query: 74 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 253
++L+ TL H V+ ++ +P +L+ + L +W + + G+ + +G+++
Sbjct: 259 VELKHTLESHQNPVSFVSWSPD-DTKLLTCGNAEVLKLWDV-----DTGV-LRHTFGNNN 311
Query: 254 F---ISDVVLSSDGNYALSGSWD--KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 418
+S D + GS D + + +WD + V+ +A + D
Sbjct: 312 TGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGES 371
Query: 419 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII-VSCGWDRTVKVWH 595
+++ DK I++ N + + I ++ ++ + S + I+ +SC + + +W
Sbjct: 372 MITVFSDKEIRILNLETKVERVISEEQP---ITSLSISGDGKFFIVNLSC---QEIHLWD 425
Query: 596 LTN-CKLKINHLGH--SGY-LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
L K + GH S Y + + D S ASG +D + +W+L + K L L
Sbjct: 426 LAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVL 481
Score = 34.3 bits (75), Expect = 0.091
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 500 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH-LTNCKLKINHL--GHSGYLNTVTVSPD 670
H + V V+FS ++ + + D T +W L + K+++ H H ++ V+ SPD
Sbjct: 223 HKNEVWFVQFS--NSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPD 280
Query: 671 GSLCASGGKDMKAMLWDLNDGKHLHTLDHND 763
+ + G LWD++ G HT +N+
Sbjct: 281 DTKLLTCGNAEVLKLWDVDTGVLRHTFGNNN 311
Score = 34.3 bits (75), Expect = 0.091
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 190
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 578 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
TV +W T+ + H G +++V P+G L A+ GK+ K +WDL + + T+
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI 319
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 39.1 bits (87), Expect = 0.003
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--I 421
++ V S DGN L S+ K L G R+ + H V +AF+ N+Q +
Sbjct: 412 VTRVAWSPDGNL-LGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCV 470
Query: 422 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 601
V+ DK IK+W+ + +T + GH V + I S D +K W
Sbjct: 471 VTCGDDKLIKVWDLSGKKLFTFE--GHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYD 528
Query: 602 NCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAMLWDLNDGK 736
N ++++ + T+ S DGS S G K+ + L + N+ +
Sbjct: 529 NVGSRVDYDAPGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESE 575
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 457
D N G D ++ ++++ + + + H K + +AFS +VS D + W
Sbjct: 884 DNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Frame = +2
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKT-----LRLWDLAAGKTTRRFEDHTKDVLSVA 397
+LYGH + + + GN S ++ + LW++ K R + H+ V +
Sbjct: 595 KLYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLE 654
Query: 398 FSVDNRQIVSGSRDKTIKLW------NTLAECKYTIQDDGHSDWVSCVRFSP-NHANPII 556
FS D+ ++S SRD+ ++ N K + + H + ++P H
Sbjct: 655 FSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQ---F 711
Query: 557 VSCGWDRTVKVWHLTN 604
+ D+TVK+W + N
Sbjct: 712 ATSSRDKTVKIWSVEN 727
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Frame = +2
Query: 197 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-- 370
+++ N+ + QK GH ++DV + G Y LS S D+T R++ ED
Sbjct: 399 SKESENWQM-QKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEH 457
Query: 371 ---------HTKDVLSVAF--SVDNRQIVSGSRDKTIKLW 457
H D+ VA N + VSG+ +K ++++
Sbjct: 458 WHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVF 497
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Frame = +2
Query: 56 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV---WKL-----TRDEN 211
SK SE +++ GH VT + T + + +LS S+D+T V WK DE+
Sbjct: 399 SKESENWQMQKVPSGHFAAVTDV-TWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEH 457
Query: 212 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 334
+ + + +++GH +V + +SG+ +K +R+++
Sbjct: 458 WHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVFE 498
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +2
Query: 92 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 196
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 27.9 bits (59), Expect = 7.9
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 475
+S S DK +R+W L + +++A ++ VSG+ I + + L
Sbjct: 248 VSSSQDKVIRIWKLVLVGDVGSWRRE----ITLASYIEGPVFVSGTFTYQISVESVLI-- 301
Query: 476 KYTIQDDGHSDWVSCVRFSP-----------NHANPIIVSCGWDRTVKVW 592
GH DWV V + P NH I+S D+T+ +W
Sbjct: 302 -------GHEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIW 344
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 38.7 bits (86), Expect = 0.004
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Frame = +2
Query: 266 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS------VDNRQ--- 418
+ +S DG Y +G L ++DL + T + H ++ S++FS VD+
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSFPVLTNVDSENASS 450
Query: 419 -IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+ SG + + I +++ G S V+ V+F+ N +++ G DR ++++
Sbjct: 451 LLASGGKGRAIHIYDVKRNFDPVGSVCG-SAAVTSVKFACNGRK--MLTSGADR-LQMFD 506
Query: 596 L----TNCKLKINH---LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 751
+ ++ +L +H L H G + V V P L + G+D K ++D+ GK + +
Sbjct: 507 VNRKASSVRLSPSHTQTLSH-GTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFK 565
Query: 752 ---DHND 763
DH D
Sbjct: 566 QDRDHGD 572
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 377 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 553
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+ I
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-I 160
Query: 554 IVSCGWDRTVKVWH 595
+ S D V++W+
Sbjct: 161 VASGSLDHEVRLWN 174
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 299 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 377 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 553
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+ I
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-I 160
Query: 554 IVSCGWDRTVKVWH 595
+ S D V++W+
Sbjct: 161 VASGSLDHEVRLWN 174
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 299 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR--------------RFED---- 370
H H ++ V LS D + S S D T+ WD+++GK+ +F++
Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEYKWPSDEVLKSHGLKFQESWYT 203
Query: 371 -HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
H K L++A S D R + +G D + LW+
Sbjct: 204 RHNKQSLALAVSSDGRYLATGGVDCHVHLWD 234
Score = 34.3 bits (75), Expect = 0.091
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 421
GH +S + SGS+D TL +W+ H ++LS+ ++ ++
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERV 319
Query: 422 VSGSRDKTIKLW 457
+S RD+T++L+
Sbjct: 320 LSVGRDRTMQLY 331
Score = 33.9 bits (74), Expect = 0.12
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Frame = +2
Query: 266 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTR---------------RFEDHTKDVLSVAF 400
+ +SSDG Y +G D + LWD+ + + F H V S+ F
Sbjct: 212 LAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCF 271
Query: 401 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGH-SDWVSCVRFSPNHANPIIVSCGWD 574
++ SGS D T+ +WN AE + I+ GH S+ +S ++S G D
Sbjct: 272 REGTAELFSGSYDGTLSIWN--AEHRTYIESCFGHQSELLSIDALGRER----VLSVGRD 325
Query: 575 RTVKVW 592
RT++++
Sbjct: 326 RTMQLY 331
Score = 32.7 bits (71), Expect = 0.28
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH-SHFISDVVL 274
GH G V+ + ++ S S D TL +W + Y + +GH S +S L
Sbjct: 261 GHCGIVSSLCFREGTAELF-SGSYDGTLSIWNA--EHRTY---IESCFGHQSELLSIDAL 314
Query: 275 SSDGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
+ LS D+T++L+ + ++TR ++ V++ + +SGS + +I
Sbjct: 315 GRER--VLSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSI 372
Query: 449 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
LW+ L + I ++ H V S NH +C W +V V
Sbjct: 373 ALWSILKKKPVFIVNNAHH--VIADHDSVNH--NCTPACSWVSSVAV 415
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 742
H+ + VS DG A+GG D LWD+ +H+
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHV 241
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 38.3 bits (85), Expect = 0.006
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 16/130 (12%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
+ + S D T+ W L +D G + GH +S +V+ + Y SGSWD T+RLW
Sbjct: 600 VYTGSGDNTIKAWSL-QD----GSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLW 652
Query: 332 DLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVS----------GSRDKTIKLWNT 463
L+ + T D L + + N I+S G DKTI +
Sbjct: 653 SLSDNSLLTVLGEETPGIIWRDDTLMKSMKIQNGAILSIAVNGKWLFTGGWDKTINVQGN 712
Query: 464 LAECKYTIQD 493
L K +QD
Sbjct: 713 LGRLKRNVQD 722
Score = 37.1 bits (82), Expect = 0.013
Identities = 32/123 (26%), Positives = 52/123 (42%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 424
H V +S DG + W T L + K + + ++A+S + +
Sbjct: 544 HIEGTEPVCVSGDGGGGIF-VWSTTFPLEEQPLRKWYEPKDWRYTGIHALAYS-EYGHVY 601
Query: 425 SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 604
+GS D TIK W+ L + GH VS + N ++ S WD TV++W L++
Sbjct: 602 TGSGDNTIKAWS-LQDGSLLCTMSGHKSVVSTLVV----VNGVLYSGSWDGTVRLWSLSD 656
Query: 605 CKL 613
L
Sbjct: 657 NSL 659
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +2
Query: 572 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
D T+K W L + L GH ++T+ V + SG D LW L+D L L
Sbjct: 606 DNTIKAWSLQDGSLLCTMSGHKSVVSTLVVV--NGVLYSGSWDGTVRLWSLSDNSLLTVL 663
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 37.9 bits (84), Expect = 0.007
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTL-RLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ-- 418
++ VV S DG L ++ K + ++ G+ R + H +V +AFS N+Q
Sbjct: 422 VNRVVWSPDGGL-LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLC 480
Query: 419 IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+V+ DKTIK+W+ + K +T +GH V V I S D +K W
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTF--EGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWL 538
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAMLWDLNDGK 736
N ++++ ++ DG+ S G K+ ++ + + N+ +
Sbjct: 539 YDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESE 587
Score = 35.1 bits (77), Expect = 0.052
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Frame = +2
Query: 428 GSRDKTI----KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR-TVKVW 592
GSR+K + K+W+ LA C +Q S++ + V + ++ + + V ++
Sbjct: 388 GSREKLVSRSFKVWD-LATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIY 446
Query: 593 HLTNCKLKINHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLDH 757
+ NHL H+G +N + S P+ LC + G+D +WD G LHT +
Sbjct: 447 SYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEG 506
Query: 758 ND 763
++
Sbjct: 507 HE 508
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +2
Query: 314 KTLRLWDLAAGKTTRRFE---DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA--ECK 478
++ ++WDLA + ++T V V +S D + + +++ + +
Sbjct: 396 RSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLR 455
Query: 479 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
++ D H+ V+ + FS + +V+CG D+T+KVW
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 37.9 bits (84), Expect = 0.007
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTL-RLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ-- 418
++ VV S DG L ++ K + ++ G+ R + H +V +AFS N+Q
Sbjct: 422 VNRVVWSPDGGL-LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLC 480
Query: 419 IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+V+ DKTIK+W+ + K +T +GH V V I S D +K W
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTF--EGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWL 538
Query: 596 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAMLWDLNDGK 736
N ++++ ++ DG+ S G K+ ++ + + N+ +
Sbjct: 539 YDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESE 587
Score = 35.1 bits (77), Expect = 0.052
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Frame = +2
Query: 428 GSRDKTI----KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR-TVKVW 592
GSR+K + K+W+ LA C +Q S++ + V + ++ + + V ++
Sbjct: 388 GSREKLVSRSFKVWD-LATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIY 446
Query: 593 HLTNCKLKINHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLDH 757
+ NHL H+G +N + S P+ LC + G+D +WD G LHT +
Sbjct: 447 SYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEG 506
Query: 758 ND 763
++
Sbjct: 507 HE 508
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +2
Query: 314 KTLRLWDLAAGKTTRRFE---DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA--ECK 478
++ ++WDLA + ++T V V +S D + + +++ + +
Sbjct: 396 RSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLR 455
Query: 479 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
++ D H+ V+ + FS + +V+CG D+T+KVW
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 37.9 bits (84), Expect = 0.007
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVL 274
GH+ + + + Y + ++S D T+ K+T N+ G L GH + V
Sbjct: 9 GHSDTIHDVVMD-YYGKRVATASSDCTI---KITGVSNSGGSQHLATLTGHRGPVWQVAW 64
Query: 275 SSD--GNYALSGSWDKTLRLWDLA-AGKTTRR--FEDHTKDVLSVAFSVDNR--QIVSGS 433
+ G+ S S+D + LW + T+ F DH V S+A++ + G+
Sbjct: 65 AHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGA 124
Query: 434 RDKTIKLWNTLAECKY--TIQDDGHSDWVSCVRFSP----------NHANPI--IVSCGW 571
D I +++ A+ + T D H V+ V ++P +P+ + S G
Sbjct: 125 SDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLASGGC 184
Query: 572 DRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPD----GSLCASGGKDMKAMLWDL 724
D TVKVW +N K++ H+ ++ V +P+ S ASG +D K ++W +
Sbjct: 185 DSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTI 243
Score = 28.3 bits (60), Expect = 6.0
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA---AGKTTRRFEDHTKDVLSV 394
PQK GHS I DVV+ G + S D T+++ ++ + H V V
Sbjct: 3 PQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQV 62
Query: 395 AFSVD--NRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVS 562
A++ + S S D I LW + ++T H V+ + ++P H + ++
Sbjct: 63 AWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAP-HELGLSLA 121
Query: 563 CG 568
CG
Sbjct: 122 CG 123
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 326 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTL---AECKYTIQD 493
+WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+ A+ T+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLST 391
Query: 494 DGHSDWVSCVRFSPN 538
HS V FSP+
Sbjct: 392 VNHSRAVHSAYFSPS 406
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/143 (18%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
+I S S +++W N + +L H +S +G + + ++ +++
Sbjct: 211 VIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHM-----AAVSPNGRFLAAAAFTADVKV 265
Query: 329 WDLAAGKT--------TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 484
W++ K + + H V + FS ++ QI++ S+D +I++WN +Y
Sbjct: 266 WEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN--INVRYH 323
Query: 485 IQDDGHSDWVSCVRFSPNHANPI 553
+ +D + V + + NP+
Sbjct: 324 LDEDPKTLKVFPIPLCDSGGNPL 346
Score = 33.5 bits (73), Expect = 0.16
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 275 SSDGNYALSGSWDKT-LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
++DG+ ++ + T + LW G+ + + A S + R + + + +K
Sbjct: 205 TADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVK 264
Query: 452 LWN-------TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 610
+W ++ E +Q GH V+ + FSPN I++ D +++VW++ N +
Sbjct: 265 VWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQ--IITASKDGSIRVWNI-NVR 321
Query: 611 LKINHLGHSGYLNTVTVSPDGSLCASGGKDM 703
HL T+ V P LC SGG +
Sbjct: 322 Y---HLDEDP--KTLKVFPI-PLCDSGGNPL 346
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +2
Query: 281 DGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKL 454
+GN Y +G +R+ D+ + + H V + Q+V + S+D++++L
Sbjct: 96 NGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRL 155
Query: 455 WNTLAECKYTI--QDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
WN I GH V V F P+ SCG D T+K+W +
Sbjct: 156 WNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRF-ASCGMDTTIKIWSM 204
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 65 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 196
SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
Score = 30.7 bits (66), Expect = 1.1
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Frame = +2
Query: 131 NPKYPDMILSSSRDKTLIVWKLTRDENN-----------YGIPQKRLYGHSHFISDVVLS 277
N + D ILS S D +++W+ EN+ Y +P ++ F D+ LS
Sbjct: 246 NRWFGDFILSKSVDNEILLWEPQLKENSPGEGASDVLLRYPVPMCDIW-FIKFSCDLHLS 304
Query: 278 SDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVL-SVAFSVDNRQIVSGSRDKT 445
S G+ + + +WDL + T+ + +K V+ A SVD I++ D T
Sbjct: 305 S----VAIGNQEGKVYVWDLKSCPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGT 360
Query: 446 IKLWNTLAE 472
I W+ + +
Sbjct: 361 IWRWDVITK 369
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 36.3 bits (80), Expect = 0.023
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Frame = +2
Query: 425 SGSRDKTIKLWNTLA---ECKYTIQDDGHS-DWVSCVRFSPNHANPIIVSCGWDRTVKVW 592
SGS D T+++W+ E ++ G V CV F P+ + V C DR V+
Sbjct: 39 SGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCA-DRKGYVY 97
Query: 593 HLTNCKLKINHLGHSGYLNTVTVSP--DGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
+ KL L G+ TV+ DG + G D LW + DG+ + T +
Sbjct: 98 DIR--KLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYE 151
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 224 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 403
P L GH+ +S V G +G+ D L+LW + G+ R +E H + V S
Sbjct: 105 PALTLQGHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGRVIRTYEGHVNNRNFVGLS 163
Query: 404 V 406
V
Sbjct: 164 V 164
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 497 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS--PD 670
GH+ VS VRF +V+ G D +K+W + + ++ + GH N V +S +
Sbjct: 111 GHTKTVSYVRFLDGGT---VVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRN 167
Query: 671 GSLCASGGKDMKAMLWDLNDGK 736
G+L G ++ + ++D GK
Sbjct: 168 GALFGCGSENNRVFVYDRRWGK 189
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 36.3 bits (80), Expect = 0.023
Identities = 30/127 (23%), Positives = 55/127 (43%)
Frame = +2
Query: 371 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 550
H V S+A S D+ + SGS D +KL+ ++ + + + F N +
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYK-FPSGEFQTNITRFTLPIRVLAF--NGSGS 117
Query: 551 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
++ + G D +K+ + + + GH G + + P+G L AS + W+L +
Sbjct: 118 LLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQN 177
Query: 731 GKHLHTL 751
G TL
Sbjct: 178 GVVSFTL 184
Score = 34.3 bits (75), Expect = 0.091
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 6/218 (2%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 271
LR H VT +A + ++ S S D + ++K E I + L I +
Sbjct: 58 LRHHQDGVTSLALSND-STLLASGSIDHCVKLYKFPSGEFQTNITRFTLP-----IRVLA 111
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
+ G+ + D+ ++L + G R + H V + F + + S T+
Sbjct: 112 FNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVL 171
Query: 452 LWNTL-AECKYTIQ----DDG-HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 613
W +T++ D G ++ V+ R+SP+ + D V T KL
Sbjct: 172 CWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRND-VVMYDRFTGEKL 230
Query: 614 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
H + +T +P+G A+ G D + +LWD++
Sbjct: 231 FALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVD 268
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 36.3 bits (80), Expect = 0.023
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Frame = +2
Query: 233 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFED---HTKDVLSVAF 400
R H ++ + ++DG Y LS +RLWD+ +G+ T FE T + +
Sbjct: 307 RATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDT 366
Query: 401 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 580
S D+ +V KT+K + + + T+ GH + V+ F+ N + + G DR
Sbjct: 367 S-DDPALVFVPCMKTVKGFG-MWSGRTTLMLRGHYESVNTCCFNSNDQE--LYTSGADRQ 422
Query: 581 VKVW 592
+ VW
Sbjct: 423 IIVW 426
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +2
Query: 314 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 35.9 bits (79), Expect = 0.030
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 7/208 (3%)
Frame = +2
Query: 119 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS--SDGNY 292
++A +P+ +I + L W+ +++N +K + + LS DG
Sbjct: 97 RMAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTV 156
Query: 293 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
+G+ D TLR+++ + KT V S+ FS + +VS ++W+ A
Sbjct: 157 LATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVSLGA-PLCRVWDVNAS 215
Query: 473 CKYTIQDDGHSDWVSCVRFSPNHANP--IIVSCGWDR--TVKVWHLTNCKLKINHL-GHS 637
+ + RFS +++ + V+ R ++ W T+ + + + L +
Sbjct: 216 AAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRN 275
Query: 638 GYLNTVTVSPDGSLCASGGKDMKAMLWD 721
++ VS DG L A G + ++ D
Sbjct: 276 NSISAFNVSADGKLLAVGTLEGDVLIID 303
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 35.9 bits (79), Expect = 0.030
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 7/208 (3%)
Frame = +2
Query: 119 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS--SDGNY 292
++A +P+ +I + L W+ +++N +K + + LS DG
Sbjct: 97 RMAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTV 156
Query: 293 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 472
+G+ D TLR+++ + KT V S+ FS + +VS ++W+ A
Sbjct: 157 LATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVSLGA-PLCRVWDVNAS 215
Query: 473 CKYTIQDDGHSDWVSCVRFSPNHANP--IIVSCGWDR--TVKVWHLTNCKLKINHL-GHS 637
+ + RFS +++ + V+ R ++ W T+ + + + L +
Sbjct: 216 AAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRN 275
Query: 638 GYLNTVTVSPDGSLCASGGKDMKAMLWD 721
++ VS DG L A G + ++ D
Sbjct: 276 NSISAFNVSADGKLLAVGTLEGDVLIID 303
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 35.9 bits (79), Expect = 0.030
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Frame = +2
Query: 284 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 463
G+ G D ++ + L++ K + E H + + +AFS +VS D + LW+T
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWST 540
Query: 464 LAECKYTIQDDGH----------SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 613
+ K T ++ + V+ ++F P ++V GW +V L +C+L
Sbjct: 541 KSWVKLTSKNSTRKFCNRSNLESTSLVTHIQFDPYQIELLVVHDGWIGLYEVRTL-DCRL 599
Query: 614 KINHLGHSGYLNTVTVSPDGSLCASG 691
+ + + T S DG + G
Sbjct: 600 QWIPDASDPAITSATYSSDGEIIYVG 625
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 35.5 bits (78), Expect = 0.039
Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 5/180 (2%)
Frame = +2
Query: 230 KRLYGHSHFISDVVLSSDG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 406
++L GH + + S D L+ D + +DL + T+ V S+ F
Sbjct: 9 RKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFKT 68
Query: 407 DNRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 580
N I+ S IK ++ TL+ + + + + + N + + S
Sbjct: 69 GNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVCNGRSSFLASADDSGD 128
Query: 581 VKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSL-CASGGKDMKAMLWDLNDGKHLHTLD 754
VK+ L C K GH+ ++V P +GG D K +LWD + G+ +D
Sbjct: 129 VKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQKIID 188
Score = 34.7 bits (76), Expect = 0.069
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 497 GHSDWVSCVRFSP-NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLN 649
GH+ VSCV FS ++S G D+TVK+W C N+ +S L+
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLH 323
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 371 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 508
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 242 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 334
GH+ +S V S G + +SG DKT+++WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 419 IVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 595
+ SG D +I++WN + + D H V+C FS + ++S D+T++VW
Sbjct: 866 LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTC--FSLSETGECVLSGSADKTIRVWQ 923
Query: 596 LTNCKLK 616
+ KL+
Sbjct: 924 IVKGKLE 930
Score = 35.1 bits (77), Expect = 0.052
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 382
H ++ LS G LSGS DKT+R+W + GK TKD
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKD 939
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 299 SGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 457
SG D ++R+W++ T ++ +H V + S ++SGS DKTI++W
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 35.1 bits (77), Expect = 0.052
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Frame = +2
Query: 266 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 445
+ S DG+ G D LR+ + K + + FS+D+ + + S D +
Sbjct: 128 MAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGS 187
Query: 446 IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC---GWDRTVKVWHLTNCK-L 613
++W + + + + RFS + P + G V V+ ++ K L
Sbjct: 188 ARIWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWKKL 247
Query: 614 KINHLGHSGYLNTVTVSPDGSLCASGGKD 700
L +T+ VS DG A GGKD
Sbjct: 248 GFKKLSRKT-ASTMAVSLDGKYIALGGKD 275
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 35.1 bits (77), Expect = 0.052
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRD--ENNYGIPQKRLYGHSHFISDVVLSSDGN----YALSGSWD 313
ILS+ RD + V + E + I Q GHS FI+ S Y +SGS D
Sbjct: 170 ILSADRDFKIRVTVFPKKPLEGAHEI-QSFCLGHSEFITCTAFVSTPELTQGYLMSGSGD 228
Query: 314 KTLRLWDLAAG 346
T+RLWD+ +G
Sbjct: 229 STVRLWDITSG 239
Score = 32.3 bits (70), Expect = 0.37
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Frame = +2
Query: 170 DKTLIVWKLTRDENNYG--IPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
DK +VW + D N G +P K+ L + I+ + S DG Y LS D +R+
Sbjct: 123 DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVT 182
Query: 332 -----DLAAGKTTRRF-EDHTKDVLSVAF----SVDNRQIVSGSRDKTIKLWN 460
L + F H++ + AF + ++SGS D T++LW+
Sbjct: 183 VFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWD 235
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 34.7 bits (76), Expect = 0.069
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDN 412
L GH + +G +G+ DKT R+WD ++ + + V S+ F+ D
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 374
Query: 413 RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 580
R + + +++T + K + D + +S + FSP+ + I WDRT
Sbjct: 375 RYVAMAEPADFVHIYDTKSGYKKEQEIDFFGE-ISGISFSPDTESLFIGV--WDRT 427
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/87 (24%), Positives = 37/87 (42%)
Frame = +2
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
LS DG D L D + G+T + H + A+ + +G++DKT +
Sbjct: 285 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 344
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFS 532
+W+T + G+ V +RF+
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFT 371
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 644 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
+N ++SPDG L A G D +L D ++G+ + TL
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTL 315
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 34.7 bits (76), Expect = 0.069
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDN 412
L GH + +G +G+ DKT R+WD ++ + + V S+ F+ D
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 368
Query: 413 RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 580
R + + +++T + K + D + +S + FSP+ + I WDRT
Sbjct: 369 RYVAMAEPADFVHIYDTKSGYKKEQEIDFFGE-ISGISFSPDTESLFIGV--WDRT 421
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/87 (24%), Positives = 37/87 (42%)
Frame = +2
Query: 272 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 451
LS DG D L D + G+T + H + A+ + +G++DKT +
Sbjct: 279 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 338
Query: 452 LWNTLAECKYTIQDDGHSDWVSCVRFS 532
+W+T + G+ V +RF+
Sbjct: 339 IWDTRKLSESVAVLKGNLGAVRSIRFT 365
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 644 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
+N ++SPDG L A G D +L D ++G+ + TL
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTL 309
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 34.7 bits (76), Expect = 0.069
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 497 GHSDWVSCVRFSP-NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLN 649
GH+ VSCV FS ++S G D+TVK+W C N+ +S L+
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLH 297
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 371 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 508
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 242 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 334
GH+ +S V S G + +SG DKT+++WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 34.7 bits (76), Expect = 0.069
Identities = 45/210 (21%), Positives = 86/210 (40%), Gaps = 10/210 (4%)
Frame = +2
Query: 143 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-----SGS 307
PD++ +SS L +W++ D + + + + S D N A + S
Sbjct: 98 PDLLATSS--DFLRLWRIADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSS 155
Query: 308 WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 487
D T +WD+ + H K+V +A+ S S D ++++++ + TI
Sbjct: 156 TDTTCTIWDIEREAVDTQLIAHDKEVFDIAWG-GVGVFASVSADGSVRVFDLRDKEHSTI 214
Query: 488 QDDGHSDWVSCVRFSPNHANP-IIVSCGWDRT-VKVWHLTNCKLKINHL-GHSGYLNTVT 658
+ VR N +P + + D V V + L + L H +N +
Sbjct: 215 IYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPALPVVELQRHQASVNAIA 274
Query: 659 VSPDGSL-CASGGKDMKAMLWDLND-GKHL 742
+P S + G D +A++WD++ G+H+
Sbjct: 275 WAPHSSCHICTAGDDSQALIWDISSMGQHV 304
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQ 418
H +++ +V + + + +S S DKTLR+WDL T + F + H V FS+ +
Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKD 509
Query: 419 IVSGSRD 439
++S SR+
Sbjct: 510 VISISRN 516
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 95 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 202
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.091
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 80 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 229
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.091
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 80 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 229
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 33.5 bits (73), Expect = 0.16
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 25/194 (12%)
Frame = +2
Query: 218 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR-RFEDHTKDV 385
G+ L H ++D+ SSD ++ +S S D T+++WD L + R R H +
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS 1130
Query: 386 LSVAFSV--DNRQIVSGSRDKTIKLWN---------TLAECKYTIQDDGHSD-----WVS 517
+ ++ ++ Q+V G+ D I +++ + E I D D VS
Sbjct: 1131 RGMCTTMLRNSTQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALVS 1190
Query: 518 CVRFSPNH-ANPIIVSCGWDRTVKVW----HLTNCKLKINHLGHSGYLNTVTVSPDGSLC 682
+ ++ + + P+++ + + +W L LK N GY++++ SP G+
Sbjct: 1191 LLNYTADSLSGPMVMYSTQNCGIHLWDTRSDLDAWTLKAN--PEEGYVSSLVTSPCGNWF 1248
Query: 683 ASGGKDMKAMLWDL 724
SG LWDL
Sbjct: 1249 VSGSSRGVLTLWDL 1262
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 328
M++ S+++ + +W D + + + G ++S +V S GN+ +SGS L L
Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEG---YVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 329 WDL 337
WDL
Sbjct: 1260 WDL 1262
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = +2
Query: 149 MILSSSRDKTLIVWKLTRDENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 319
++++ + D + VW++++D +K L H+ ++ + +S SGS D T
Sbjct: 3344 IVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCT 3403
Query: 320 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 475
+ +WDL++ R+ D + ++ + +IV+ + + +W+ +C
Sbjct: 3404 VIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAA-GTVLAVWSINGDC 3454
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Frame = +2
Query: 413 RQIVSGSRDKTIKLWNTLAECKYTIQDDGH-SDWVSCVRFSPNHANPIIVSCGWDRTVKV 589
+ I G D++++ + + + ++ H S+ + C S H I+V+ D V V
Sbjct: 3299 KYITWGFPDRSLRFMSYDQDKLLSTHENLHESNQIQCAGVS--HDGRIVVTGAEDGLVCV 3356
Query: 590 WHLTN--------CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 727
W ++ +L+ H+ + + VS + ASG D ++WDL+
Sbjct: 3357 WRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLS 3410
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +2
Query: 281 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 460
D N G D T+ ++++ + + + H K + +AFS +VS D I W+
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 494 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 610
D H V+ + F+ + +++CG D+ +KVW ++ K
Sbjct: 449 DAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRK 487
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 190
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 92 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 190
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 33.1 bits (72), Expect = 0.21
Identities = 44/199 (22%), Positives = 75/199 (37%), Gaps = 8/199 (4%)
Frame = +2
Query: 41 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 220
L+ P S S + L H G V + N K P+ + S + D T+ +W L N
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLA----NPS 149
Query: 221 IPQKRLYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTK-D 382
P L G ++ + S N S S + T +WD+ K + +
Sbjct: 150 KPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLKTTVRCS 209
Query: 383 VLSVAFSVDNRQIVSGSRDKT--IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 556
VL N+ +V+ D + +KL + GH V + + P+ + +
Sbjct: 210 VLQWDPDHFNQILVASDEDSSPNVKLLDIRYLQSPVRTFVGHQRGVIAMEWCPSD-SLYL 268
Query: 557 VSCGWDRTVKVWHLTNCKL 613
++CG D W+ K+
Sbjct: 269 LTCGKDNRTICWNTKTGKI 287
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.7 bits (71), Expect = 0.28
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 242 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 349
GH+ ++ + S G + SGS D ++R+W++ G+
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 617 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDII 769
+ + GH+G + +++ G ASG D +W++ G+ L ++ I
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAI 467
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 362 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPN 538
++ HT V S++ I SGS D ++++W C Q D + + CV ++P
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPL 475
Query: 539 HANPII-VSCGWD 574
P++ V+ G D
Sbjct: 476 SRLPVLAVAMGRD 488
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 736
HS +N + S DG+ SGG++ ++W L+ GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 349
HS ++ + SSDG Y SG + L +W L GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 32.7 bits (71), Expect = 0.28
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 212 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVL 388
N G L GH F DG +G+ DKT R+WD+ K+ + +
Sbjct: 305 NTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIR 364
Query: 389 SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 568
S+ ++ D + + + +++ ++ T Q+ +S + FSP+ + +
Sbjct: 365 SIRYTSDGKYMAMAEPADFVHVYD-VSNGYETEQEIDFFGEISGISFSPD-TEALFIGV- 421
Query: 569 WDRT 580
WDRT
Sbjct: 422 WDRT 425
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 644 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
+N ++SPDG L G + +++L D N GK L TL
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATL 313
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 433
++ LS DG + G ++L L D GKT H + A+ D +G+
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESL-LVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGN 336
Query: 434 RDKTIKLWN 460
+DKT ++W+
Sbjct: 337 QDKTCRVWD 345
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 617 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 751
+ H +N ++SPDG L A G + + ++ D N GK L TL
Sbjct: 271 VKHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETL 315
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 212 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVL 388
N G + L GH F DG +G+ DKT R+WD+ ++ + + +
Sbjct: 307 NTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIR 366
Query: 389 SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 568
S+ ++ D + + + +++ ++ T Q+ +S + FSP+ + +
Sbjct: 367 SIRYTSDGKYMAMAEPADFVHVYD-VSNGYETEQEIDFFGEISGISFSPD-TEALFIGV- 423
Query: 569 WDRT 580
WDRT
Sbjct: 424 WDRT 427
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 212 NYGIPQKRLYGHSHF---ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTK 379
++ + + +L H F ++ LS DG A+ G + L + D GKT H
Sbjct: 262 DFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIVGDNPEGL-IVDPNTGKTLETLSGHLD 320
Query: 380 DVLSVAFSVDNRQIVSGSRDKTIKLWN 460
+ A+ D +G++DKT ++W+
Sbjct: 321 FSFASAWHPDGVTFSTGNQDKTCRVWD 347
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 551 IIVSCGWDRTVKVWHLTNC--KLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 721
+++SCG D ++W + K ++ L H +N+ SP G+ + +D + +WD
Sbjct: 327 LLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRIWD 386
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 131 NPKYPDMILSSSRDKTLIVW---KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 301
NP P+++LS D +W KL + + + KR+ ++F S G L+
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYF-----SPSSGTKILT 375
Query: 302 GSWDKTLRLWDLAAG 346
D +R+WD G
Sbjct: 376 TCQDNRIRIWDSIFG 390
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 245 HSHFISDVVLSSDGNYALS-GSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQ 418
H I+ V S+ + + S+DK ++LWDL + + TK + V FS D+R
Sbjct: 582 HQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRY 641
Query: 419 IVSGSRDKTIK 451
+++ + D ++
Sbjct: 642 LLASAVDNEVR 652
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/111 (19%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKD----------VLSVAFSVDNRQIVSGSRDKT 445
++GS + +L+L+D+ +T H+ + SV + ++ ++ K
Sbjct: 504 IAGSANGSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKD 563
Query: 446 IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 598
+ L++ + + + H + ++ V+FS NH+ + + +D+ VK+W L
Sbjct: 564 VALYDIGRGTRLQVFANMHQEHINVVKFS-NHSPFLFATSSFDKDVKLWDL 613
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 203 DENNYGIPQKRLYGHSHFISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTK 379
D N+ + + + S ++++ S DG A+ G + L L D +GK E H
Sbjct: 264 DATNFALLNRFAFHWS--VNNISTSPDGKLVAVLGDSPECL-LADTGSGKVIHGLEGHLD 320
Query: 380 DVLSVAFSVDNRQIVSGSRDKTIKLWN 460
S A+ + + + +G++D T +LW+
Sbjct: 321 YSFSSAWHPNGQILATGNQDTTCRLWD 347
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +2
Query: 236 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDN 412
L GH + +G +G+ D T RLWD+ ++ + + + + ++ F+ D
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 413 RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 538
R + + L++T A + D + ++ + FSP+
Sbjct: 375 RFLAMAEPADFVHLFDTEAGYSQCQEIDLFGE-IAGISFSPD 415
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
GH Y + P+G + A+G +D LWD+ +
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRN 350
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 403
+SGS D T+R+WDL +G H V + S
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDV 385
+ ++V S +G Y L+ S D+T+R+++ L A + ED K++
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLEDLGKNI 263
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDL 337
ISD+ S DG Y LS + TL+LWD+
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 257 ISDVVLSSDGNYALSGSWDKTLRLWDL 337
ISD+ S DG Y LS + TL+LWD+
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 80 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 244
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/154 (20%), Positives = 62/154 (40%), Gaps = 1/154 (0%)
Frame = +2
Query: 296 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 475
+S + D ++ ++D + F H K V +A + ++ RD+ + N +
Sbjct: 104 ISAAADGSVAIFDTDPFVLLKSFRPHKKAVNDLAIHPSGKLALAVYRDEFFAMLNLVRGK 163
Query: 476 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 655
+ GH S V+F P+ +V V V + KL + L + +
Sbjct: 164 RSFCCRLGHE--ASLVKFDPSGERFYMVV---SNKVGVHQSEDAKLLLE-LENPSRKRIL 217
Query: 656 TVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLD 754
+P + +GG+D WD N GK ++++
Sbjct: 218 CATPGESGTLFTGGEDRAITAWDTNSGKLAYSIE 251
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +2
Query: 248 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED--HTKDVLSVAFSVDN--- 412
SH ++ G A SG D T+ L+DL + + D H + +++F +
Sbjct: 39 SHISPITTVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLS 98
Query: 413 --RQIVSGSRDKTIKLWNT 463
R ++S + D ++ +++T
Sbjct: 99 FPRNLISAAADGSVAIFDT 117
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 656 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHN 760
TV+ G ASGG D L+DL L + LDHN
Sbjct: 46 TVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHN 81
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 287 NYALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSGSRDKTIK 451
N +GS D WD+ R F++ HT V ++ + D I +GS D+T++
Sbjct: 177 NLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 452 LWNT 463
+W+T
Sbjct: 237 VWDT 240
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 95 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 274
+GH+ + + + P+++ + S D W + + + Q H+ + +
Sbjct: 160 KGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKV-HTMGVCCISS 218
Query: 275 SSDGNYAL-SGSWDKTLRLWD 334
+ Y++ +GS+D+TLR+WD
Sbjct: 219 NPSDPYSIFTGSYDETLRVWD 239
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 745
H G + + P SL +G KD + LWD K +H
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIH 2411
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 644 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHND 763
+N +VSPDG L A G + ++ D + GK + +L H D
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKD 291
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 629 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 730
GH Y P+G + A+G +D LWD+ +
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWDIRN 321
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 152 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 331
+++SS D TL ++ + G+ + +SH + + + LSG D R+W
Sbjct: 358 LMASSMDGTLYDQRMVK--RGVGVQTYEGHVNSHTPIEFGIDPSERFILSGGDDCYTRIW 415
Query: 332 DLAAGK--TTRRFEDHTKDVLSVAFSVDNRQ 418
+ +G+ + +F + V V +S D RQ
Sbjct: 416 SIKSGQLMSENKFSNSVPSV--VCWSADERQ 444
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 311 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 448
D+T R+W+L GK + D KD + + R++ G D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 65 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 229
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 230 KRLY 241
+Y
Sbjct: 3370 TVVY 3373
>At5g13850.1 68418.m01619 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 159
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 723 RSHNIAFISLPPDAHKEPSGDTVTVF 646
+S NI F+ PD K P+ DT +F
Sbjct: 84 KSKNILFVISKPDVFKSPASDTYVIF 109
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 723 RSHNIAFISLPPDAHKEPSGDTVTVF 646
+S NI F+ PD K P+ DT +F
Sbjct: 88 KSKNILFVISKPDVFKSPASDTYVIF 113
>At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40
repeats (PF00400); low similarity to MEK kinase alpha
(GI:4028547); transcriptional repressor TUP1
(GI:3406654) [Dictyostelium discoideum]; Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (TGF-beta receptor interacting protein 1)
(TRIP-1) (SP:Q38884) [Arabidopsis thaliana]
Length = 442
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 248 SHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQ 418
S +SDV ++SD + + S + +WD AG + D + S+ VDN+
Sbjct: 150 SRGLSDVAITSDEDSRIFSPDTLGMVHVWDRRAGVSPCIELSTDRYDSIKSIQIYVDNQT 209
Query: 419 IVSGSRDKTIKLWN 460
I ++ I +W+
Sbjct: 210 IFGAGKEGIIHIWD 223
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 632 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 736
HS + + S DG+L SG K ++W+L GK
Sbjct: 245 HSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK 279
>At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 716 WDLNDGKHLHTLDHNDIIT 772
WDLN K L TL+H +I+T
Sbjct: 652 WDLNTVKELETLEHLEILT 670
>At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 893
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 716 WDLNDGKHLHTLDHNDIIT 772
WDLN K L TL+H +I+T
Sbjct: 654 WDLNTVKELETLEHLEILT 672
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 167 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 253
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 599 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 745
T K I L +G + ++ S DG S G D + +WDL K L+
Sbjct: 362 TKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLY 410
>At4g10480.1 68417.m01720 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 212
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 723 RSHNIAFISLPPDAHKEPSGDTVTVF 646
RS N+ F+ PD K P+ +T +F
Sbjct: 93 RSKNVLFVISKPDVFKSPNSETYVIF 118
>At1g33040.1 68414.m04068 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 209
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -2
Query: 723 RSHNIAFISLPPDAHKEPSGDTVTVF 646
R+ N+ F+ PD +K P+ +T +F
Sbjct: 90 RAKNVLFVISKPDVYKSPNAETYVIF 115
>At5g59120.1 68418.m07409 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]; non-consensus AA acceptor site at exon 6
Length = 732
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 522 SDSHPIMPTPLLYPVVGTELSRSGISLTVSSRLTI 626
S++ I+P L YP + +LS SG + TV+ T+
Sbjct: 617 SEAKKILPRNLNYPSMSAKLSGSGTTFTVTFNRTL 651
>At5g01290.1 68418.m00039 mRNA capping enzyme family protein similar
to mRNA capping enzyme [Xenopus laevis] GI:7239232;
contains Pfam profiles PF01331: mRNA capping enzyme
catalytic domain, PF03919: mRNA capping enzyme
C-terminal domain
Length = 607
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 533 PNHANPIIVSCGWDRTVKVW 592
P+ N IV C WD+ KVW
Sbjct: 527 PSSYNGKIVECAWDKDKKVW 546
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 6/131 (4%)
Frame = +2
Query: 98 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 277
GH V + +P ++ S S D ++ VW + ++ P H+ ++ + +
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKS----PALSFKAHNADVNVISWN 322
Query: 278 SDGNYAL-SGSWDKTLRLWDLAAGK----TTRRFEDHTKDVLSVAFSVDNRQIVS-GSRD 439
+ L SGS D T + DL K FE H + S+ +S ++ S D
Sbjct: 323 RLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGD 382
Query: 440 KTIKLWNTLAE 472
+ +W+ E
Sbjct: 383 NQLTIWDLSLE 393
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,858,169
Number of Sequences: 28952
Number of extensions: 426241
Number of successful extensions: 2879
Number of sequences better than 10.0: 246
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2194
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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