Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11p21
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.7  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 571 HLQHSGCMVTYGGMSRDPVSIPTSAFIFKNLSFFGFWMTAWNEKAD 708
           HL+H   +      +R  +++  S FI K + F G  +T    KAD
Sbjct: 471 HLEHLRQVFEKLKQARMTINLEKSNFIQKEVKFLGHILTINGIKAD 516


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 556 LEMLRHLQHSGCMVTYGGMSRDPVSIPTSAFIFKNLSFFGFWMTAWNEK 702
           L+ ++ +Q  G M+T   MS   +   T    +K LS  G +    NE+
Sbjct: 293 LKFIKKIQIFGIMITKACMSASNLIQRTPNICYKLLSNLGIFPKTTNEQ 341


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -1

Query: 568 LTFLKNFFRPHNL--RLRKAC 512
           LT+ +NF  PH L  R R+ C
Sbjct: 596 LTWRRNFHGPHRLAARSRRCC 616


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -1

Query: 568 LTFLKNFFRPHNL--RLRKAC 512
           LT+ +NF  PH L  R R+ C
Sbjct: 488 LTWRRNFHGPHRLAARSRRCC 508


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -2

Query: 318 WIAEFAIHQIHCRLVDDMTRMSWY*NFGMYMSILL 214
           WI   A H + C L      +SW     ++  +LL
Sbjct: 365 WIHHLARHAVACFLTRGDLWLSWEEGMKVFEELLL 399


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 247 LKLRHVYVNTPLIFALLVNRNR 182
           L +R+V+V + L+F   V RN+
Sbjct: 136 LFVRYVFVTSYLLFDYFVQRNQ 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,944
Number of Sequences: 336
Number of extensions: 4148
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)