Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p21
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical pr... 88 7e-18
AL023844-7|CAA19533.1| 346|Caenorhabditis elegans Hypothetical ... 75 7e-14
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 37 0.013
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 33 0.21
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 33 0.21
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical
protein W09H1.5 protein.
Length = 344
Score = 87.8 bits (208), Expect = 7e-18
Identities = 38/69 (55%), Positives = 46/69 (66%)
Frame = +1
Query: 487 IVEEEKKIDKPSLALNCVGGKSSLEMLRHLQHSGCMVTYGGMSRDPVSIPTSAFIFKNLS 666
+ +KK LALNCVGG+SSL + L H GCMVTYGGMS+ PV PT IFK++S
Sbjct: 217 LYSRKKKFPGVKLALNCVGGRSSLFLASLLDHGGCMVTYGGMSKQPVDCPTGPLIFKDIS 276
Query: 667 FFGFWMTAW 693
GFWM+ W
Sbjct: 277 LRGFWMSRW 285
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = +1
Query: 280 STVYLVYSEFGDPLHVVKYRECQVPPLGS-QEVLVRMLAAPVNPADINTIQGKYPVKVNL 456
ST LVY + +P ++ + + S +VLV+ +AAP+NPAD+N IQG YPVK L
Sbjct: 16 STRQLVYEGYRNPPEAIQLKTVTIADKPSADQVLVQWIAAPINPADLNQIQGVYPVKPAL 75
Query: 457 PCVPGNEGVG-IVEEEKKIDKPSLALNCVGGKSSLEMLRHL 576
P V GNEG G ++ + + + + +S L R L
Sbjct: 76 PAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWREL 116
>AL023844-7|CAA19533.1| 346|Caenorhabditis elegans Hypothetical
protein Y48A6B.9 protein.
Length = 346
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +1
Query: 292 LVYSEFGDPLHVVKYRECQVPPL-GSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVP 468
L+Y +FGDPL V++ +VP GS E LV LA+P+NP DIN IQG Y V+ LP +
Sbjct: 10 LIYRKFGDPLKVLQLETVEVPAEPGSGECLVEWLASPINPLDINRIQGNYAVRAELPVIG 69
Query: 469 GNEGVGIV 492
G+EGVG V
Sbjct: 70 GSEGVGRV 77
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +1
Query: 514 KPSLALNCVGGKSSLEMLRHLQHSGCMVTYGGMSRDPVSIPTSAFIFKNLSFFGFWMTAW 693
+P LALN VGGKS+L++ L+ G VTYGGMS+ TSA +F ++ G + W
Sbjct: 220 RPKLALNGVGGKSALQISSVLERGGTCVTYGGMSKKAHEFTTSALVFNDICVRGVAVGMW 279
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/67 (44%), Positives = 36/67 (53%)
Frame = +1
Query: 295 VYSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGN 474
V FG P V++ E +P L +VLVR AA VNP D G+Y NLP VPG
Sbjct: 14 VVRRFGAP-DVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQYGKLPNLPYVPGK 72
Query: 475 EGVGIVE 495
+G G VE
Sbjct: 73 DGAGFVE 79
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +1
Query: 292 LVYSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPG 471
L++ ++G PL V R+ VP E+LV++ + + +D++T +G + P + G
Sbjct: 13 LIFEKYGGPLEV---RQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGG 69
Query: 472 NEGVGIV 492
+EG G V
Sbjct: 70 HEGAGTV 76
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +1
Query: 292 LVYSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPG 471
L++ +G PL + ++ +P E+LV+M + + +D++T G + P + G
Sbjct: 13 LIFESYGGPLEI---KQLPIPQPNEDELLVKMEYSGICHSDVHTWLGDFHYVSKCPMIGG 69
Query: 472 NEGVGIV 492
+EG G V
Sbjct: 70 HEGAGSV 76
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 346 QVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVE 495
QV P + EV V++L V D T+ G P + P V G+EG GIVE
Sbjct: 29 QVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGL-FPVVLGHEGSGIVE 77
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 346 QVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVE 495
QV P + EV V++L V D T+ G P + P V G+EG GIVE
Sbjct: 29 QVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGL-FPVVLGHEGSGIVE 77
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 292 LVYSEFGDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPG 471
LV+ + PL V R+ VP E+LV++ + + +D++ G P V G
Sbjct: 12 LVFDTWNGPLEV---RQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGG 68
Query: 472 NEGVGIV 492
+EG G V
Sbjct: 69 HEGAGSV 75
>Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical
protein R90.1 protein.
Length = 776
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 537 CGRKKFFRNVKTSTAFRMHGDLRRDVPRSCVNTDIGI 647
CGR F + S + DLRR+ P+ C N +
Sbjct: 83 CGRNDKFNYLVMSLQGKNLADLRREAPKQCFNLSTAV 119
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical protein
C08H9.2 protein.
Length = 1220
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 409 ADINTIQGKYPVKVNLPCVPGNEGVGIVEEEKKIDKPSLAL 531
A I ++ KY V +N+P GNE + I E+K ++ + A+
Sbjct: 1027 ATITALKEKYGVIINVPREDGNETITIQGYEEKANECAAAI 1067
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 346 QVPPLGSQEVLVR--MLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVE 495
QV P + EV V+ +L V D T+ G P + P V G+EG GIVE
Sbjct: 29 QVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDPEGL-FPVVLGHEGSGIVE 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,095,312
Number of Sequences: 27780
Number of extensions: 370343
Number of successful extensions: 1079
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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