Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p21
(727 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45770.2 68416.m04947 oxidoreductase, zinc-binding dehydrogen... 78 5e-15
At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogen... 78 5e-15
At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogen... 44 1e-04
At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogen... 38 0.007
At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP prot... 37 0.016
At3g15090.1 68416.m01908 oxidoreductase, zinc-binding dehydrogen... 36 0.036
At5g43940.1 68418.m05376 alcohol dehydrogenase class III / gluta... 34 0.11
At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD) id... 30 1.8
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 30 1.8
At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar... 29 3.1
At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar... 29 3.1
At1g67690.1 68414.m07724 peptidase M3 family protein / thimet ol... 29 4.1
At4g37990.1 68417.m05368 mannitol dehydrogenase, putative (ELI3-... 28 5.5
At4g33200.1 68417.m04727 myosin, putative similar to myosin (GI:... 27 9.6
At3g59010.1 68416.m06577 pectinesterase family protein contains ... 27 9.6
>At3g45770.2 68416.m04947 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 297
Score = 78.2 bits (184), Expect = 5e-15
Identities = 29/62 (46%), Positives = 48/62 (77%)
Frame = +1
Query: 508 IDKPSLALNCVGGKSSLEMLRHLQHSGCMVTYGGMSRDPVSIPTSAFIFKNLSFFGFWMT 687
+ +P+L NCVGG ++ +L++L+ G MVTYGGMS+ P+++ T++FIFK+L+ GFW+
Sbjct: 178 LPEPALGFNCVGGNAASLVLKYLREGGTMVTYGGMSKKPITVSTTSFIFKDLALRGFWLQ 237
Query: 688 AW 693
+W
Sbjct: 238 SW 239
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 385 MLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIV 492
M+AAP+NP+DIN I+G YPV+ +P V G EGVG V
Sbjct: 1 MIAAPINPSDINRIEGVYPVRPPVPAVGGYEGVGEV 36
>At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 78.2 bits (184), Expect = 5e-15
Identities = 29/62 (46%), Positives = 48/62 (77%)
Frame = +1
Query: 508 IDKPSLALNCVGGKSSLEMLRHLQHSGCMVTYGGMSRDPVSIPTSAFIFKNLSFFGFWMT 687
+ +P+L NCVGG ++ +L++L+ G MVTYGGMS+ P+++ T++FIFK+L+ GFW+
Sbjct: 256 LPEPALGFNCVGGNAASLVLKYLREGGTMVTYGGMSKKPITVSTTSFIFKDLALRGFWLQ 315
Query: 688 AW 693
+W
Sbjct: 316 SW 317
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +1
Query: 292 LVYSEFGDPLHVVKYRECQVPPLGSQE--VLVRMLAAPVNPADINTIQGKYPVKVNLPCV 465
+VY E G P V R +PP+ +E V V+M+AAP+NP+DIN I+G YPV+ +P V
Sbjct: 48 IVYEEHGSPDSVT--RLVNLPPVEVKENDVCVKMIAAPINPSDINRIEGVYPVRPPVPAV 105
Query: 466 PGNEGVGIV 492
G EGVG V
Sbjct: 106 GGYEGVGEV 114
>At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogenase
family protein contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 386
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +1
Query: 295 VYSEFGDPLHVVKYRE-CQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVN-LPCVP 468
VYS++G + V+K VP + +VL++++AA +NP D QGK+ + LP VP
Sbjct: 82 VYSDYGG-VDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVP 140
Query: 469 GNEGVGIV 492
G + G+V
Sbjct: 141 GYDVAGVV 148
>At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
zeta-crystallin / quinone reductase (NADPH) - Mus
musculus, PIR:A54932; contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 348
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 349 VPPLGSQ-EVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVE 495
+P L S V VR++A +N A+ I GKY K LP +PG++ GIV+
Sbjct: 32 IPSLNSDTSVRVRVIATSLNYANYLQILGKYQEKPPLPFIPGSDYSGIVD 81
>At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP protein
GB:CAA89858 GI:886434 from [Arabidopsis thaliana];
contains Pfam profile PF00107: oxidoreductase,
zinc-binding dehydrogenase family
Length = 629
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 355 PLGSQEVLVRMLAAPVNPADINTIQGKYPV--KVNLPCVPGNEGVGIV 492
P+G +VL++++ A VN +D+N G+Y LP G EGVG++
Sbjct: 313 PIGPHQVLLKIIYAGVNASDVNFSSGRYFTGGSPKLPFDAGFEGVGLI 360
>At3g15090.1 68416.m01908 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to NOGO-interacting
mitochondrial protein from Mus musculus [gi:14522884];
contains Pfam profile: PF00107 zinc-binding
dehydrogenases
Length = 366
Score = 35.5 bits (78), Expect = 0.036
Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Frame = +1
Query: 292 LVYSEFGDPLHVVKYRE-CQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVP 468
++ FG P V + RE VP L EVLV+ A VNP D I+ Y V P +P
Sbjct: 35 VILPRFGGP-EVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCR-IRAGYGRSVFQPHLP 92
Query: 469 GNEGVGIVEEEKKIDKPSLALNCVGGKSSLEMLRHLQHSGCMVTYGGMSRDPVSIPTSAF 648
G + E I +L G+ L G YG +S D ++ S+
Sbjct: 93 IIVGRDVSGEVAAIGTSVKSLKV--GQEVFGALHPTALRGTYTDYGILSEDELTEKPSSI 150
Query: 649 IFKNLSFFGF-WMTAW 693
S F +TAW
Sbjct: 151 SHVEASAIPFAALTAW 166
>At5g43940.1 68418.m05376 alcohol dehydrogenase class III /
glutathione-dependent formaldehyde dehydrogenase /
GSH-FDH (ADHIII) identical to gi:1143388
Length = 379
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 313 DPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIV 492
+P + + QV P + EV +++L + D T GK P + PC+ G+E GIV
Sbjct: 17 EPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIV 75
Query: 493 E 495
E
Sbjct: 76 E 76
>At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD)
identical to SP|P48523 Cinnamyl-alcohol dehydrogenase
(EC 1.1.1.195) (CAD) [Arabidopsis thaliana]
Length = 365
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 313 DPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIV 492
DP V+ + G+ +V ++++ + DI+ I+ + N P VPG+E VG V
Sbjct: 18 DPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMS-NYPMVPGHEVVGEV 76
Query: 493 EE 498
E
Sbjct: 77 LE 78
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = -1
Query: 379 PTLLGSPAVGLGIPCTLQHAMDRRIRYTPDTL*ISRRYDSHVLVLKLRHVYVNTPLIFAL 200
P++ GL + D+ + + D L + + Y S L LK++ Y N+ + +L
Sbjct: 1726 PSITSKRDSGLSKEKQVNLGKDKVLSFDTDLLQLKKAYKSGSLDLKIKADYTNSKDLKSL 1785
Query: 199 LVNRNRITILLS 164
L N + + LLS
Sbjct: 1786 LANGSLVKSLLS 1797
>At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GI:551257 from [Nicotiana tabacum]
Length = 396
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 310 GDPLHVVKYRECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGI 489
G+PL + + +V P EV +R+L + D++ +G+ + P + G+E GI
Sbjct: 35 GEPLVM---EDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGI 91
Query: 490 VE 495
VE
Sbjct: 92 VE 93
>At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GB:CAA37333 GI:297178 from
[Solanum tuberosum]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 394
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 337 RECQVPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVE 495
+E V P EV V++L + + D+ G + P + G+E VGIVE
Sbjct: 26 QEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERAFPRILGHEAVGIVE 78
>At1g67690.1 68414.m07724 peptidase M3 family protein / thimet
oligopeptidase family protein similar to SP|P42676
Neurolysin, mitochondrial precursor (EC 3.4.24.16)
(Mitochondrial oligopeptidase M) {Rattus norvegicus};
contains Pfam profile PF01432: Peptidase family M3
Length = 672
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = -1
Query: 223 NTPLIFALLVNRNRITILLSYIHE*DYSL*KINSK--LDLLGFFNRLSTATSNLVL 62
N P++ L+ +R+R+ + Y H DY+L + SK + ++ F +S++ ++L +
Sbjct: 263 NIPVLQRLVQSRHRLACVCGYAHFADYALDRRMSKTSMRVIRFLEDISSSLTDLAI 318
>At4g37990.1 68417.m05368 mannitol dehydrogenase, putative (ELI3-2)
identical to GI:16269
Length = 359
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +1
Query: 361 GSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPGNEGVGIVEE 498
G ++V ++L + +D++ ++ ++ + P VPG+E VG+V E
Sbjct: 32 GEKDVRFKVLFCGICHSDLHMVKNEWGMST-YPLVPGHEIVGVVTE 76
>At4g33200.1 68417.m04727 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]
Length = 1522
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 165 HIFMNETIHFRKLTQNWTY*AFLIDSQQQLQIL 67
H+F E +RK NW+Y F ID+Q L ++
Sbjct: 469 HVFKMEQDEYRKEEINWSYIEF-IDNQDVLDLI 500
>At3g59010.1 68416.m06577 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 529
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 458 GRFTFTGYFPCIVFMSA-GLTGAASMRTNTSWLPSGG 351
GR ++ GY P + A G T + + N SWLPS G
Sbjct: 486 GRVSWAGYHPALTLTEAQGFTVSGFIDGN-SWLPSTG 521
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,926,747
Number of Sequences: 28952
Number of extensions: 336031
Number of successful extensions: 818
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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