Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p19
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical ... 217 5e-57
AL023847-1|CAA19545.1| 364|Caenorhabditis elegans Hypothetical ... 29 4.1
Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical p... 28 5.4
Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical p... 28 5.4
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical p... 27 9.4
U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 27 9.4
>AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical
protein Y71A12B.1 protein.
Length = 246
Score = 217 bits (531), Expect = 5e-57
Identities = 109/183 (59%), Positives = 128/183 (69%)
Frame = +2
Query: 5 LGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGC 184
LGDEWKGYV+R+ GGNDKQGFPMKQG+LTN RVRLL+ KG SCYR R++GERKRKSVRGC
Sbjct: 41 LGDEWKGYVVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGC 100
Query: 185 IVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 364
IVDAN+S L+LVIV+KG EI GLTD +PR+LGPKRASKIRKLFNL+K DDV +YV+
Sbjct: 101 IVDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITH 160
Query: 365 VLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQR 544
+G + APKIQRL+TP + A Y KLLA+
Sbjct: 161 DKTFPDG----VTKTIAPKIQRLITPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKY 216
Query: 545 KKE 553
KE
Sbjct: 217 SKE 219
>AL023847-1|CAA19545.1| 364|Caenorhabditis elegans Hypothetical
protein Y57A10C.3 protein.
Length = 364
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 589 PAFDLFLATHLGFLLSLCKQFSIFSLRGLALSETLLLQSETMTSTL 452
P F ++ +G L+++C Q SIFS+ L + + +L ++ L
Sbjct: 70 PFFGIWFELIIGKLITMCYQLSIFSIGNLEIRKFYVLWTDDSNKML 115
>Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical
protein F28H7.10a protein.
Length = 841
Score = 28.3 bits (60), Expect = 5.4
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Frame = -3
Query: 577 LFLATHLGFLLSLCKQFSIFSLR-GLALSETLLL-----QSETMTSTLQNYRGD*PLDLR 416
L+L + LGF+ C + LR A +E L ET ++ NY +D +
Sbjct: 428 LWLRSLLGFIFFYCCFVCAYMLRPSSATTEHLTRGRINDDGETESTNSTNYLQWHAIDTQ 487
Query: 415 CLMSGFSIFFSFLGWEHAFDDITTYIIFFAKVEQLTDFG 299
C + +S + + GW +I T I+ ++ L DFG
Sbjct: 488 CHLMYYSAWPWYHGWFRLGCEIMTIIVMLFQI--LLDFG 524
>Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical
protein F28H7.10a protein.
Length = 841
Score = 28.3 bits (60), Expect = 5.4
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Frame = -3
Query: 577 LFLATHLGFLLSLCKQFSIFSLR-GLALSETLLL-----QSETMTSTLQNYRGD*PLDLR 416
L+L + LGF+ C + LR A +E L ET ++ NY +D +
Sbjct: 428 LWLRSLLGFIFFYCCFVCAYMLRPSSATTEHLTRGRINDDGETESTNSTNYLQWHAIDTQ 487
Query: 415 CLMSGFSIFFSFLGWEHAFDDITTYIIFFAKVEQLTDFG 299
C + +S + + GW +I T I+ ++ L DFG
Sbjct: 488 CHLMYYSAWPWYHGWFRLGCEIMTIIVMLFQI--LLDFG 524
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 300 PKSVSCSTLAKKMMYVVMSSNACSQPRKEKKMLNPDIRHLRS 425
PKS+ S KK + MS+ + + +KM D HL++
Sbjct: 105 PKSLLTSETLKKKLQASMSAKRRKEQEQRRKMYEEDNEHLKA 146
>Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical
protein T20B3.15 protein.
Length = 349
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 553 FLLSLCKQFSIFSLRGLALSETLLL 479
FL+S FSIF++ G A S+ L+L
Sbjct: 283 FLMSTVSVFSIFAIGGFAFSDDLIL 307
>U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical
protein ZK328.4 protein.
Length = 532
Score = 27.5 bits (58), Expect = 9.4
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSK-EDDVRRYVVKRVLPAKEGKENAKPRHK 412
Q P + D N R PK K K+ +LS E+D + V P+KE KE K R K
Sbjct: 109 QLYPEMFDSNQKPRQKPKEVKKALKVESLSDYENDDKENVPPCGKPSKE-KEEKKQRTK 166
>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
protein Y48G1C.5 protein.
Length = 1161
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 209 LALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 358
L L +K QE+ P +GPK A +IR L L + + +VV
Sbjct: 1010 LLLTFGKKRTQEVTHYQYTGWPEHMGPKDAEEIRYLLKLVTDSERPVFVV 1059
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,070,661
Number of Sequences: 27780
Number of extensions: 308781
Number of successful extensions: 827
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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