Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11p11
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.7  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +2

Query: 353 MFLLLLEVKIFKMLTSHFVSSSDQFLINYQEFTLFLVLI 469
           +F LLL V   K     ++    QF++ +  F    +L+
Sbjct: 120 VFTLLLGVDFVKEYAFEYIQLYSQFILYFLLFATLKILL 158


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +2

Query: 353 MFLLLLEVKIFKMLTSHFVSSSDQFLINYQEFTLFLVLI 469
           +F LLL V   K     ++    QF++ +  F    +L+
Sbjct: 120 VFTLLLGVDFVKEYAFEYIQLYSQFILYFLLFATLKILL 158


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +2

Query: 353 MFLLLLEVKIFKMLTSHFVSSSDQFLINYQEFTLFLVLI 469
           +F LLL V   K     ++    QF++ +  F    +L+
Sbjct: 440 VFTLLLGVDFVKEYAFEYIQLYSQFILYFLLFATLKILL 478


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 576 SQ*QPNRESSTIRPHPRRHFYHSLDLRKG 662
           +Q Q N+E  T R H ++H+  + ++  G
Sbjct: 286 NQYQMNQEYRTDRKHTQQHYQMNQNMYPG 314


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 576 SQ*QPNRESSTIRPHPRRHFYHSLDLRKG 662
           +Q Q N+E  T R H ++H+  + ++  G
Sbjct: 234 NQYQMNQEYRTDRKHTQQHYQMNQNMYPG 262


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 576 SQ*QPNRESSTIRPHPRRHFYHSLDLRKG 662
           +Q Q N+E  T R H ++H+  + ++  G
Sbjct: 417 NQYQMNQEYRTDRKHTQQHYQMNQNMYPG 445


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,269
Number of Sequences: 336
Number of extensions: 3223
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)