Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p07
(643 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 36 0.027
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 35 0.063
01_05_0421 + 21990034-21990392,21991691-21992681 33 0.15
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 33 0.25
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 33 0.25
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 33 0.25
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 32 0.34
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 32 0.45
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 31 0.59
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 31 0.59
01_01_0990 + 7847066-7847478,7847713-7848679 31 0.59
08_02_1057 + 23995782-23996446,23998026-23998167,23998242-239994... 30 1.4
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 30 1.4
04_04_1066 - 30533114-30533185,30533507-30533614,30533716-305340... 30 1.4
03_01_0579 - 4274927-4274998,4275320-4275427,4275529-4275904,427... 30 1.4
01_01_0527 + 3867621-3867764,3867855-3868128,3868216-3868315,386... 30 1.4
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 29 2.4
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 29 2.4
03_02_0880 - 12103703-12103726,12103938-12104210,12104389-121049... 29 4.1
04_03_0129 - 11554917-11555033,11555470-11555613,11555807-115559... 28 5.5
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 28 7.2
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 319 DCNKKFVHESTLKAHSFVHEPIPYVCH---CGVAYYKSCDLKDHKKLVH 456
+C K FV + L+ H+ VH Y+C CG + S LK H L+H
Sbjct: 93 NCGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRH-HLIH 140
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +1
Query: 310 QCPDCNKKFVHESTLKAHSFVHE-PIPYVC-H--CGVAYYKSCDLKDHKK 447
Q P C KKFV S LK H +H ++C H CG A+ +L+ H K
Sbjct: 119 QEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLK 168
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 322 CNKKFVHESTLKAHSFVHEPIPYVCH---CGVAYYKSCDLKDHKKLVH 456
C K FV L+ H+ VH YVCH C + S LK H L+H
Sbjct: 50 CGKTFVDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSKLKRH-FLIH 96
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
K +C C+KK+ S KAHS + Y C CG + + H+
Sbjct: 81 KKWKCDKCSKKYAVHSDWKAHSKICGTREYKCDCGTIFSRRDSFITHR 128
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
K +C C+K++ +S KAHS + Y C CG + + H+
Sbjct: 118 KKWKCDKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHR 165
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
K +C C+KK+ +S KAH+ + Y C CG + + H+
Sbjct: 140 KKWKCDRCSKKYAVQSDWKAHTKICGTKEYRCDCGTIFSRKDSFITHR 187
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
K +C C K++ S KAHS V Y C CG + + H+
Sbjct: 162 KKWKCDRCGKRYAVHSDWKAHSKVCGTREYKCDCGTVFSRRDSFVTHR 209
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
K +C C+K++ S KAHS V Y C CG + + H+
Sbjct: 149 KKWKCDKCSKRYAVHSDWKAHSKVCGTREYRCDCGTLFSRRDSFITHR 196
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAY 414
K +C C+K++ +S KAHS + Y C CG +
Sbjct: 170 KKWKCDKCSKRYAVQSDWKAHSKICGTREYRCDCGTLF 207
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
K +C C+K++ +S KAHS Y C CG + + H+
Sbjct: 122 KKWRCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHR 169
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
K +C C+KK+ +S KAH+ Y C CG + + H+
Sbjct: 122 KKWKCDKCSKKYAVQSDWKAHTKTCGSREYRCDCGTLFSRRDSFITHR 169
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 301 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
K +C C+K++ +S KAHS Y C CG + + H+
Sbjct: 99 KKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHR 146
>08_02_1057 +
23995782-23996446,23998026-23998167,23998242-23999486,
23999521-23999529
Length = 686
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 6/81 (7%)
Frame = +1
Query: 151 KVVLDRVKIYSCDQCPLGFLDQTDWCLHQTKFSHIXXXXXXXXXXXXXYIKV------HQ 312
+ V D + Y C QC L F Q+ + H F + V +
Sbjct: 303 ETVADDINSYECQQCNLTFHGQSAYAHHLITFHKVSSKRRKSNKVSKFGEPVIGKDGKFE 362
Query: 313 CPDCNKKFVHESTLKAHSFVH 375
CP CNK F +S H H
Sbjct: 363 CPVCNKTFEEQSRYFGHIGSH 383
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 313 CPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
C C K++ ++ LKAH+ Y C CG + + H+
Sbjct: 139 CQRCGKRYAVQADLKAHTKTCGTREYRCDCGTLFTRRDSFVTHR 182
>04_04_1066 -
30533114-30533185,30533507-30533614,30533716-30534091,
30534173-30534330,30534416-30534536,30534613-30534831,
30534923-30535022,30535254-30535383,30535474-30535617
Length = 475
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 109 SVVEKTMAQLLREVKVVLDRVKIYSCDQCPLGFLDQTDWCLHQTK 243
S+ KT+A+L +E+ +D+ + Y C +G ++ WC K
Sbjct: 220 SIEHKTLAEL-KEIDPFVDKDEKYQCTATIIGIQERKTWCYQACK 263
>03_01_0579 -
4274927-4274998,4275320-4275427,4275529-4275904,
4275986-4276143,4276229-4276349,4276426-4276644,
4276736-4276835,4276923-4277196,4277287-4277430
Length = 523
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 109 SVVEKTMAQLLREVKVVLDRVKIYSCDQCPLGFLDQTDWCLHQTK 243
S+ KT+A+L +E+ +D+ + Y C +G ++ WC K
Sbjct: 268 SIEHKTLAEL-KEIDPFVDKDEKYQCTATIIGIQERKTWCYQACK 311
>01_01_0527 +
3867621-3867764,3867855-3868128,3868216-3868315,
3868407-3868625,3868702-3868822,3868908-3869065,
3869147-3869522,3869624-3869731,3870053-3870124
Length = 523
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 109 SVVEKTMAQLLREVKVVLDRVKIYSCDQCPLGFLDQTDWCLHQTK 243
S+ KT+A+L +E+ +D+ + Y C +G ++ WC K
Sbjct: 268 SIEHKTLAEL-KEIDPFVDKDEKYQCTATIIGIQERKTWCYQACK 311
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 310 QCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 444
+C C K++ S KAH Y C CG+ + + L H+
Sbjct: 125 RCERCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHR 169
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 499 PVKTKTSKPKMKSVQIKKLKNKKIRGRNSKPGSQKIKHNFDKK 627
PV K++ K+K ++ K K+ K G+N K K K + D+K
Sbjct: 936 PVDQKSNGDKIKQQEVLKQKDIKQDGKNDKAKDDKEKKSRDQK 978
>03_02_0880 -
12103703-12103726,12103938-12104210,12104389-12104931,
12105017-12105374,12105696-12105994,12106116-12106189,
12106630-12106717,12107573-12107674,12107813-12107841,
12108118-12108235
Length = 635
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 499 PVKTKTSKPKMKSVQIKKLKNKKIRGRNSKPGSQKIKHNFDK 624
P K + KPK KSV + + + I G N KP + + +K
Sbjct: 116 PPKIEPLKPKAKSVPVPVQRTEVISGNNMKPAKVQNADDVEK 157
>04_03_0129 -
11554917-11555033,11555470-11555613,11555807-11555999,
11556083-11556139,11556300-11556403,11556882-11556953,
11557069-11557187,11557639-11557783,11558527-11558672,
11558758-11558827,11559000-11559056,11559081-11559228,
11559311-11559432,11559649-11559845,11560296-11560350,
11560468-11560680,11561239-11561386,11561515-11561585,
11563286-11563316,11563532-11563623,11565621-11565688,
11567895-11568069
Length = 847
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 319 DCNKKFVHESTLKAHSFVHEPIP 387
DC KKF H + LK H + E P
Sbjct: 572 DCTKKFYHGNYLKFHRAIREAYP 594
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/77 (25%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 DRVKIYSCDQCPLGFLDQTDWCLHQTKFSHIXXXXXXXXXXXXXYIKV------HQCPDC 324
D + Y C QC L F Q+ + H F + V +CP C
Sbjct: 313 DDINSYECQQCNLTFHGQSAYAHHLITFHKMGSKRRKINKVGKFGEPVIGKDGKFECPVC 372
Query: 325 NKKFVHESTLKAHSFVH 375
NK F +S H H
Sbjct: 373 NKTFEEQSRYFGHVGSH 389
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,620,733
Number of Sequences: 37544
Number of extensions: 241194
Number of successful extensions: 697
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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