Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11p06
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    26   0.22 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   0.87 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   6.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.1  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
 Frame = -3

Query: 515 VHNLTVRGAPSLLH*STRVYQVGQNHPSRTTLLFPPAGCLLTKSTALLTS-NSDFENPVK 339
           +HNL+    P  +  + +  QV +N P  T    PPA    T S++ L S N    +   
Sbjct: 181 MHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFPTTSSSSALESPNPASRSSCL 240

Query: 338 MSSTAAVQFLSSLLY*RAIPLRPQTSLLQLEF 243
            S+T+++  L+ L   R      Q + L+ EF
Sbjct: 241 GSNTSSMLSLNCLNTGRTNFTNKQLTELEKEF 272


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.2 bits (50), Expect = 0.87
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -3

Query: 515 VHNLTVRGAPSLLH*STRVYQVGQNHPSRTTLLFPPAGCLLTKSTALLTS 366
           +HNL+    P  +  + +  QV +N P  T    PPA    T S++ L S
Sbjct: 181 MHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFPTTSSSSALES 230


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 389 WLKDNLLVEREELFLKDDSVR 451
           WLKD   ++  E  L+ +SVR
Sbjct: 361 WLKDGHPIDHNEAVLRIESVR 381


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 144 LYSNFLLLLFVNCPYGTYLFIFIFGSI 224
           LYS+ LLL +V+C     + I   G +
Sbjct: 287 LYSSLLLLDYVSCVVALIILILQCGRV 313


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 144 LYSNFLLLLFVNCPYGTYLFIFIFGSI 224
           LYS+ LLL +V+C     + I   G +
Sbjct: 213 LYSSLLLLDYVSCVVALIILILQCGRV 239


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 172 NNNNRKFEYN*VICLTL 122
           NN NRK+ +  V CL L
Sbjct: 49  NNTNRKYYWLNVCCLNL 65


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 389 KSTALLTSNSDFENPVKMSSTAAVQF 312
           + T  +T +  F+N +KM++ A   F
Sbjct: 271 RKTETITDSYKFDNDIKMAAQAIAFF 296


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 324 GSAISFLFTLLKSNSAPPPNITSTVRV 244
           G++ S+LF +++ +     N TST+ V
Sbjct: 425 GASSSYLFIMIQLDLGNKKNETSTILV 451


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,711
Number of Sequences: 336
Number of extensions: 3025
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)