Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11p03
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   1.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   2.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.1  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   7.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   9.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    19   9.5  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    19   9.5  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 267 CTRKYYFANKIIFPLHYVLLL 205
           C++K +  N  IF L+ VLLL
Sbjct: 108 CSKKSFRMNFAIFNLYMVLLL 128


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 146 QVKRNVPTATTVIAPSA 96
           QVKRNVP  T    P A
Sbjct: 201 QVKRNVPKPTVPKIPPA 217


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 146 QVKRNVPTATTVIAPSA 96
           QVKRNVP  T    P A
Sbjct: 201 QVKRNVPKPTVPKIPPA 217


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 232 FSAALCSATIFADSRLE 182
           F  A+C+ T+FA  + E
Sbjct: 9   FILAICACTVFAQQQAE 25


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 258  KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 166
            KY     +  P  Y+LL+   +  +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 258  KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 166
            KY     +  P  Y+LL+   +  +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 133 FLFTWWQEREVPPPHG 180
           FL T    +EVPPP G
Sbjct: 10  FLPTVLPHQEVPPPFG 25


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -3

Query: 305 IYNIILLDSKHKRVHV----SIILRTKLFFRCTMFCYY 204
           ++ + LL S +  VH+      I+ T  F  CT + YY
Sbjct: 68  VHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYY 105



 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 255 YYFANKIIFPLHYVLLL 205
           Y++   IIF +H + LL
Sbjct: 148 YFYCAFIIFTVHLLFLL 164


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 146 QVKRNVPTAT 117
           QVKRNVP  T
Sbjct: 201 QVKRNVPKPT 210


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 228  PLHYVLLLSSPIRALSSVRWG 166
            P  Y+LL+   I  L+ V WG
Sbjct: 1040 PSMYLLLILYSIINLNVVSWG 1060


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 228  PLHYVLLLSSPIRALSSVRWG 166
            P  Y+LL+   I  L+ V WG
Sbjct: 1040 PSMYLLLILYSIINLNVVSWG 1060


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 228  PLHYVLLLSSPIRALSSVRWG 166
            P  Y+LL+   I  L+ V WG
Sbjct: 1040 PSMYLLLILYSIINLNVVSWG 1060


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 228  PLHYVLLLSSPIRALSSVRWG 166
            P  Y+LL+   I  L+ V WG
Sbjct: 1040 PSMYLLLILYSIINLNVVSWG 1060


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 249 FANKIIFPLHYVLLLSSPI 193
           FA  I+F L +   L+SPI
Sbjct: 136 FAGLIVFILFFAQGLTSPI 154


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 75  VAALRIRILGHRKMAI 28
           V+  + ++LGHR+ A+
Sbjct: 212 VSLPQFKVLGHRRRAV 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,381
Number of Sequences: 336
Number of extensions: 1578
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)