Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11p02
(725 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 61 1e-09
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 60 2e-09
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 59 4e-09
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 54 1e-07
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 54 2e-07
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 51 1e-06
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 50 1e-06
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 50 1e-06
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 37 2e-06
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 49 4e-06
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 48 6e-06
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 48 1e-05
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 46 3e-05
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 46 4e-05
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 45 5e-05
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 44 1e-04
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 44 1e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 42 7e-04
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 42 7e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 41 9e-04
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 41 9e-04
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 41 9e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 41 0.001
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 41 0.001
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 41 0.001
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 38 0.006
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 37 0.019
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 36 0.033
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 35 0.058
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.058
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 34 0.10
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 34 0.13
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 33 0.18
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 33 0.18
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 32 0.54
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 30 2.2
SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) 29 2.9
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.8
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 29 3.8
SB_15287| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 29 5.1
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 29 5.1
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_43380| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0) 28 8.9
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 60.9 bits (141), Expect = 1e-09
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Frame = +2
Query: 221 SESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQ 385
SE + T +F+GN+ TT DL+ FE+YG V++ DI + Y FV
Sbjct: 239 SEDEFDPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELS 298
Query: 386 VGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGT 565
+A + ++ E V +K+ K P I+VG +T+ +V F ++G
Sbjct: 299 SAIQARRKMDREYVGRNRVKVGFGK-----VNPINTIWVGGVTNSLSEQQVERHFGRYGR 353
Query: 566 VVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQ 712
V + I V N V D+ A ++ G + + ++V+ + RQ
Sbjct: 354 VTKVVINRVTNQALVSFDSVDSATIAHAQMKGRTMFSRRVRVEFVSRESRQ 404
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +2
Query: 254 KIFIGNLS-DKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVH 430
+IFIGNL+ DK DL +F ++G V+ C + N+GFV E E+ EA+ +G +++
Sbjct: 47 RIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGADEAVAKEHGRIIN 106
Query: 431 GQAIKIEAAKSR 466
G+ I + SR
Sbjct: 107 GKKIDVRIVNSR 118
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 461 SRKAPSTPTTKIFVGNL-TDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDA 637
++ P + +IF+GNL TDK ++ E+F + G V+ C + N+GFV + ++A
Sbjct: 37 NKNDPHSVRCRIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGADEA 96
Query: 638 IKELNGMMVDGQPMKVQLSTSR 703
+ + +G +++G+ + V++ SR
Sbjct: 97 VAKEHGRIINGKKIDVRIVNSR 118
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 59.7 bits (138), Expect = 2e-09
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Frame = +2
Query: 248 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGREAIQ 406
T +F+GNL + DLR FEK+G V++ DI R Y FV + V +A
Sbjct: 236 TRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGNTYAFVKFADLDVAAKAKC 295
Query: 407 NLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 586
+ G+ + IKI +S++ TT+++VG L PE+ F +FG + D
Sbjct: 296 AMQGQCIGRNHIKIGYGRSQQ-----TTRLWVGGLGPWISIPELEREFDRFGAIRRIDYR 350
Query: 587 R--NYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 694
+ ++ ++ D+ + A +E+ G + + +++ +
Sbjct: 351 KGGDHAYILYDSLDAASVAAREMRGFQMGDRRLRIDFA 388
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/162 (22%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 433
++++G L TTE D+R F YG + + ++ NYGFV E+++ +A+ NG+ + G
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNGKEMLG 63
Query: 434 QAIKIEAAK--SRKAPSTPTT-------------KIFVGNLTDKTRAPEVRELFQKFGTV 568
+ I +E ++ +R + S P+ ++ + NL+ + ++++ ++ G V
Sbjct: 64 ERILVEHSRGGARSSSSRPSRGRDKYGPPVRTPWRMTIENLSSRVSWQDLKDFCRQVGDV 123
Query: 569 VECDIVR---NYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 685
D + G + D+ A+K+L+G ++G+ +++
Sbjct: 124 TYGDAHKQRQGEGVIEFSCKRDLKRALKKLDGEELNGKRIRL 165
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 491 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDG 670
++++G L T +VR F+ +G + + ++ NYGFV + D +DA+ E NG + G
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNGKEMLG 63
Query: 671 QPMKVQLSTSRVR 709
+ + V+ S R
Sbjct: 64 ERILVEHSRGGAR 76
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 412
+ I + ++ D++ +F G V C ++R+ Y FV+ +N +A++ +
Sbjct: 29 LIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREM 88
Query: 413 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-- 586
NG + + +K+ A+ + +++ L + EV LF+ FG ++ ++
Sbjct: 89 NGARLQNKTLKVSFARP-SSTEIKNANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKD 147
Query: 587 -----RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 685
R GFV D + AI +LN + G +K+
Sbjct: 148 VSGEGRGTGFVRFDKRCEAQTAIDDLNNKTLPGTNVKL 185
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTV--VECDIVRNYGFVHMENEQVGREAIQNLNGELVH 430
IF+ L + T L LF YG + +E + + YGFV+M N + AI LNG H
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKGYGFVNMSNYEEACHAICCLNGTPQH 333
Query: 431 GQ 436
G+
Sbjct: 334 GK 335
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Frame = +2
Query: 476 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVN 631
S T + + + +++++F G V C ++R+ Y FV+ D D N
Sbjct: 23 SDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDAN 82
Query: 632 DAIKELNGMMVDGQPMKVQLS 694
A++E+NG + + +KV +
Sbjct: 83 KAVREMNGARLQNKTLKVSFA 103
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 412
+ + + T+ R +FE ++ C IVR+ +GFV + ++AI L
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 413 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 592
NG + + +K+ A +T ++V N+ + E R+ F+ +G +V C ++R+
Sbjct: 109 NGFTIGNKVLKV-AFSRPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRD 167
Query: 593 --------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 691
GFV D + AI L+G G M +Q+
Sbjct: 168 KSTGLPKGCGFVLYDKKAEAQAAISSLSGTFFPGSTMGLQI 208
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 412
+++ N+ + EA+ R FE YG +V C ++R+ GFV + + + AI +L
Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSL 194
Query: 413 NGELVHG--QAIKIEAAKSRKAPSTPTTKI 496
+G G ++I A A P +
Sbjct: 195 SGTFFPGSTMGLQIRYADDNSAKVRPPNNV 224
Score = 35.1 bits (77), Expect = 0.058
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +2
Query: 449 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFV 604
E +++++ +T ++TD+T R +F+ ++ C IVR+ +GFV
Sbjct: 38 EPQEAQESKTTLIVNYIPQDMTDQT----FRMMFEAVASLNNCKIVRHKPSGWSYGFGFV 93
Query: 605 HLDATGDVNDAIKELNGMMVDGQPMKVQLS 694
+ T D AI +LNG + + +KV S
Sbjct: 94 DYNTTEDAQKAIDKLNGFTIGNKVLKVAFS 123
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 54.0 bits (124), Expect = 1e-07
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 412
I++G L +K +EA + LF + G VV + ++ YGFV E+ AI+ +
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74
Query: 413 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVV------- 571
N V+G+ I++ A + +F+GNL + + + F FG ++
Sbjct: 75 NMIKVYGKPIRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMR 134
Query: 572 ECDIVRNYGFVHLD-ATGDVND-AIKELNGMMVDGQPMKVQLSTSRVRQRXGH 724
+ D + GF ++ A+ D +D AI+ +NG + +P+ V + + + H
Sbjct: 135 DSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKESKGERH 187
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 53.6 bits (123), Expect = 2e-07
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLN 415
KIFIG L+ TTE L+ F ++GT+V+C I+ R +GFV E+ E ++
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSDSVNEVLKK-K 109
Query: 416 GELVHGQAIKIEAAKSRKAPSTP-----TTKIFVGNLTDKTRAPEVRELFQK------FG 562
++ + I+ + + R P T KIFVG L T +++E F G
Sbjct: 110 DHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKNGMG 169
Query: 563 TVVECDIVRN 592
V++ D+ R+
Sbjct: 170 EVIDVDLKRD 179
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Frame = +2
Query: 461 SRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATG 622
S+ + S KIF+G L T +++ F ++GT+V+C I+ R +GFV +++
Sbjct: 41 SKMSESEKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSD 100
Query: 623 DVNDAIKELNGMMVD 667
VN+ +K+ + ++ D
Sbjct: 101 SVNEVLKKKDHVLDD 115
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +2
Query: 233 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 412
M GT ++F+G LS +T DL +F YG ++ CD+ YGF+ E+ + EA++
Sbjct: 1 MASRGT-QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMRRE 59
Query: 413 NGELVHGQAIKIEAAKS 463
N + G I +E +S
Sbjct: 60 NNRKLFGSRIVVEYVRS 76
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +2
Query: 488 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 667
T++FVG L+ +T+ ++ +F +G ++ CD+ YGF+ + D +A++ N +
Sbjct: 6 TQLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMRRENNRKLF 65
Query: 668 GQPMKVQLSTSRVR 709
G + V+ S R
Sbjct: 66 GSRIVVEYVRSGER 79
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/170 (20%), Positives = 80/170 (47%), Gaps = 26/170 (15%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 409
++++G+++ + E +R F +G + + D+ + + FV + + + A++
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 410 LNGELVHGQAIKIEAAKS--RKAP--------STPTTKIFVGNLTDKTRAPEVRELFQKF 559
+NG L+ G+ IK+ + + AP + +I++ ++ +++ +F+ F
Sbjct: 163 MNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAF 222
Query: 560 GTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 685
G VV C + + YGF+ + NDAI +N + GQ ++V
Sbjct: 223 GKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRV 272
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 409
+I+I ++ E D++ +FE +G VV C + + YGF+ EN+Q +AI +
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
Query: 410 LNGELVHGQAIKIEAA 457
+N + GQ +++ A
Sbjct: 260 MNLFDLGGQFLRVGRA 275
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +2
Query: 485 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNG 655
TTK++VGNL + E+ F+KFG + + + RN + FV + D +A++EL+G
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELDG 62
Query: 656 MMVDGQPMKVQLSTSR-VRQRXG 721
V + ++V+ S +R R R G
Sbjct: 63 ANVCDRTIRVEFSNNRGGRDRGG 85
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +2
Query: 248 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN---YGFVHMENEQVGREAIQNLNG 418
T K+++GNL ++L FEK+G + + + RN + FV E+ + EA++ L+G
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELDG 62
Query: 419 ELVHGQAIKIEAAKSR 466
V + I++E + +R
Sbjct: 63 ANVCDRTIRVEFSNNR 78
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%)
Frame = +2
Query: 233 MPGTGTFKI-----FIGNLSDKTTEADLRPLFEKYGTVV--------ECDIVRNYGFVHM 373
+P TG K+ +I L TT+ DL L KYGT++ + ++ + YGFV
Sbjct: 89 LPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDF 148
Query: 374 ENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQ 553
E+ ++A+ LV+ + I+ + AK ++ T +++ NL + +F
Sbjct: 149 ESPISAQKAV----AALVN-KGIQAQMAKQQE---QDPTNLYIQNLPQNCDEAMLENMFS 200
Query: 554 KFGTVVECDIVRN-------YGFVHLDATGDVNDAIKELNGMMVDG--QPMKVQLSTSRV 706
K+G V+ I+R+ GF +++ IK+ N M+ G Q + V+ +
Sbjct: 201 KYGKVISTRILRDKDTNSKGVGFARMESAEKCEQVIKDFNKKMLPGCIQELVVKFADGGP 260
Query: 707 RQRXG 721
++R G
Sbjct: 261 KKRQG 265
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Frame = +2
Query: 227 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENE 382
+K+ G + + L TTE++++ F ++G + C++ R +GFV + +
Sbjct: 107 TKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKD 166
Query: 383 QVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 562
+ + + + G+ ++ + ++ + P K+FVG L + T + E F +FG
Sbjct: 167 EDAKNVLST--SHRIQGRLCEVRLPRPKEELNVPK-KLFVGRLPESTTEKTLMEYFAQFG 223
Query: 563 TVVECDI---VRNYGFVHLDATGD-VNDAIKELN 652
V + I R++GFV + + V+ A + +N
Sbjct: 224 EVTDVYIPKPFRHFGFVTFASVANCVSIAFENMN 257
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 36.7 bits (81), Expect(2) = 2e-06
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 242 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-YGFVHMENEQV 388
+ + K+F+G + E DLRP+FE YG + E I+++ Y H ++ ++
Sbjct: 167 SNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKDDRKL 216
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 355
K+F+G +S E DLR +F +GT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
Score = 32.7 bits (71), Expect(2) = 2e-06
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 491 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 592
K+FVG ++ + ++R +F FGT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Frame = +2
Query: 245 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 400
G +++ NLS T ADL+ F +YG VV IV N +G V M + +
Sbjct: 347 GGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVTMTTSEEAAKC 406
Query: 401 IQNLNGELVHGQAIKIEAAKSRKAPST--PTTKIFVGNLTDKTRAPE 535
IQ+L+ +HG+AI ++ AK + T +K G DK + E
Sbjct: 407 IQHLHRTELHGRAITVDRAKGDRVSQTQGSASKKTPGKAADKKGSAE 453
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 412
+F+GN+ + +E L+ +F + G V+ +V + YGF ++++ A++NL
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 413 NGELVHGQAIKIEAAKSRK 469
NG ++G+A+++++A S K
Sbjct: 87 NGYELNGRALRVDSAASEK 105
Score = 35.1 bits (77), Expect = 0.058
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +2
Query: 458 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLD 613
+S A +FVGN+ + +++E+F + G V+ +V + YGF
Sbjct: 15 QSSGAADRSLRSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYK 74
Query: 614 ATGDVNDAIKELNGMMVDGQPMKVQLSTS 700
A++ LNG ++G+ ++V + S
Sbjct: 75 DQETALSAMRNLNGYELNGRALRVDSAAS 103
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = +2
Query: 488 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGM 658
TK+++G+L D E+ F +G + + + RN + F D D DA++EL+G
Sbjct: 32 TKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGR 91
Query: 659 MVDGQPMKVQLS--TSRVRQRXG 721
+ GQ ++V+L+ SR R R G
Sbjct: 92 YICGQRVRVELAKGPSRGRPRMG 114
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN---YGFVHMENEQVGREAIQNLNGEL 424
K++IG+L D ++ ++ F YG + + + RN + F ++ + +A++ L+G
Sbjct: 33 KVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGRY 92
Query: 425 VHGQAIKIEAAK 460
+ GQ +++E AK
Sbjct: 93 ICGQRVRVELAK 104
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 48.4 bits (110), Expect = 6e-06
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 415
+F+G L+ T E L+ FE++G V I+ RNYGFV +++ +E ++
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFKDDGPSKEVLK--K 139
Query: 416 GELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 592
+++G+ ++ KSR I+VG L VRE F+KFG + + N
Sbjct: 140 SHVINGKT--VDVGKSRN-----FRVIYVGGLPSHFTEQTVREHFKKFGVIEAVKFIEN 191
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +2
Query: 494 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKE-- 646
+FVG L T +++ F++FG V I+ RNYGFV G + +K+
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFKDDGPSKEVLKKSH 141
Query: 647 -LNGMMVD 667
+NG VD
Sbjct: 142 VINGKTVD 149
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 349
+F+ NLS+ T E D+ F YG V + I+
Sbjct: 321 LFVDNLSEDTKELDVLRYFRPYGQVAKVHIL 351
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 47.6 bits (108), Expect = 1e-05
Identities = 36/184 (19%), Positives = 78/184 (42%), Gaps = 31/184 (16%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 415
+++ N D + ++ + + G +V ++ + +GFV E + EA+ LN
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLN 170
Query: 416 GELVHGQAIKIEAAKSRKAPSTPT-----------------TKIFVGNLTDKTRAPEVRE 544
G+ + G+ + AK R + +++ NL D +RE
Sbjct: 171 GKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLRE 230
Query: 545 LFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 703
F +GT+ ++++ +GFV + + A+ E+NG ++ +P+ V L+ R
Sbjct: 231 EFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQRR 290
Query: 704 VRQR 715
++
Sbjct: 291 EERK 294
Score = 44.0 bits (99), Expect = 1e-04
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 24/163 (14%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVE---C-DIV--RNYGFVHMENEQVGR----EAIQ 406
+++G+L+ TEA L F G+V+ C D+V R+ G+ ++ +Q G EAI
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAIA 74
Query: 407 NLNGELVHGQAIKIEAAKSRKAP-----STPT--TKIFVGNLTDKTRAPEVRELFQKFGT 565
++G L++ + + + S+K + P T ++V N D +++E+ + G
Sbjct: 75 RVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGK 134
Query: 566 VVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQ 673
+V ++ + +GFV + + +A+ LNG + G+
Sbjct: 135 IVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGR 177
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYG----TVVECDIV----RNYGFVHMENEQVGREAIQN 409
K+F+G L+ +TT LR FE YG VV CD R +G+V + +V R +++
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKD 74
Query: 410 L--NG-ELVHGQAIKIEAAKSRKAPST----PTTKIFVGNLTDKTRAPEVRELFQ 553
NG + G+ ++++ A R S T KIFVG L + +++E +
Sbjct: 75 KVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATKEDIQEAIE 129
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 46.0 bits (104), Expect = 3e-05
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 433
K+F+G LS +TT+ L+ F KYG +V DI + + G +Q +
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMD----ALTGRPRGFAFVQFKHQSEADA 85
Query: 434 QAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQK-FGTVVECDIV-------- 586
K AA K P KIFVG L +T ++RE F K + V E + +
Sbjct: 86 IDPK-PAAPIGKPPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRR 144
Query: 587 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 688
R + FV D+ D D I E ++G ++V+
Sbjct: 145 RGFCFVSFDSE-DTVDKICETQFHNIEGNKVEVK 177
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 419 ELVHGQ-AIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 583
E V+G +++ K+R K+FVG L+ +T ++E F K+G +V DI
Sbjct: 5 EAVNGYIGTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDI 60
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Frame = +2
Query: 242 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLN 415
TG ++F+GNL D E +++ +F+KYG V E I + +GF+ ++ A L+
Sbjct: 50 TGRCRLFVGNLID-CDEEEMKEMFKKYGEVAEVFINKEKGFGFIRLDTRLHAEAAKAGLD 108
Query: 416 GELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG----TVVECDI 583
G+ +++ A T + V NL + + + F +FG VV CD+
Sbjct: 109 MATRKGRTLRVRFA-------THAAALRVKNLDNLVTNELLEQAFSQFGDVERAVVVCDV 161
Query: 584 ---VRNYGFVHLDATGDVNDAIKELN 652
+ +G V + ++A+++++
Sbjct: 162 RGRSKGHGIVEFSRKNNAHNAMQKIS 187
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 436
I++ N+ +E L+ +F KYG + + +R+YGFV+ + +AI +NG + G
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVYFAKRESAVQAIDGINGAYIDGC 63
Query: 437 AIKIEAA 457
+++ A
Sbjct: 64 KLEVSLA 70
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +2
Query: 494 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQ 673
I+V N+ +++ +F K+G + + +R+YGFV+ AI +NG +DG
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVYFAKRESAVQAIDGINGAYIDGC 63
Query: 674 PMKVQLS 694
++V L+
Sbjct: 64 KLEVSLA 70
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Frame = +2
Query: 236 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVV--------ECDIVRNYGFVHMENEQVG 391
PG +FI +L + T+ADL F+ +GTV+ + ++ + +GFV +N
Sbjct: 272 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSA 331
Query: 392 REAIQNLNGELVHGQAIKIEAAKSRKA 472
+ AIQ++NG + + +K++ + + A
Sbjct: 332 QNAIQHMNGFQIGAKRLKVQLKRPKDA 358
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Frame = +2
Query: 458 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLD 613
+S P + +F+ +L + ++ + FQ FGTV+ + + +GFV D
Sbjct: 267 ESHYTPGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYD 326
Query: 614 ATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQR 715
+AI+ +NG + + +KVQL + R
Sbjct: 327 NVMSAQNAIQHMNGFQIGAKRLKVQLKRPKDANR 360
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +2
Query: 290 EADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRK 469
E+D+ YG + + + R YGFV ++ + +A+ +LNG + G+ + +E +K R+
Sbjct: 702 ESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSKGRR 761
Query: 470 A 472
+
Sbjct: 762 S 762
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +2
Query: 524 RAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 703
R +V + + +G + + + R YGFV D D DA+ +LNG + G+ + V+ S R
Sbjct: 701 RESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSKGR 760
Query: 704 VRQRXG 721
+ G
Sbjct: 761 RSEGGG 766
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 236 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR---NYGFVHMENEQVGREAIQ 406
P + + + NLS +T+ DL+ F KYG V D + G V E++ AI+
Sbjct: 793 PVRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIE 852
Query: 407 NLNGELVHGQAIKI 448
L+ + G+ I++
Sbjct: 853 KLDDTELGGRRIRV 866
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 44.4 bits (100), Expect = 1e-04
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNLN 415
+F L+ DL F K G V + I+ R+ G ++E ++ L+
Sbjct: 148 VFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAVPLAIGLS 207
Query: 416 GELVHGQAIKI---EAAKSR--------KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFG 562
G+ + G I + +A K+R K P PT +++VG+L V+ +F+ FG
Sbjct: 208 GQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPT-RLYVGSLHFNITEAMVKAVFEPFG 266
Query: 563 TVVECDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 703
TV ++ + YGFV A++++NG + G+P+K+ T R
Sbjct: 267 TVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIGPVTER 321
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +2
Query: 245 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREA 400
G ++++G+L TEA ++ +FE +GTV ++ + YGFV + + A
Sbjct: 240 GPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 299
Query: 401 IQNLNGELVHGQAIKIEAAKSR 466
++ +NG + G+ +KI R
Sbjct: 300 MEQMNGFELAGRPLKIGPVTER 321
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 409
K +IGNL K EADL+ F +Y VV+ ++ R + FV +++ +AI
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINE 289
Query: 410 LNGELVHGQAIKIEAAKSRK 469
L+G+ G+++K+ A+SR+
Sbjct: 290 LDGQEFDGRSMKVNQARSRE 309
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +2
Query: 491 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKE 646
K ++GNL K ++++ F ++ VV+ ++ R + FV + ++ DAI E
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINE 289
Query: 647 LNGMMVDGQPMKVQLSTSRVRQRXG 721
L+G DG+ MKV + SR QR G
Sbjct: 290 LDGQEFDGRSMKVNQARSR-EQRGG 313
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 587 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRXG 721
R +GFV + +++ AI + +G +DG+PMKV + R + G
Sbjct: 50 RGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRGERGGG 94
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 350 RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 466
R +GFV +E +AI +GE + G+ +K+ A+ R
Sbjct: 50 RGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPR 88
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 436
+++ NLS TE L+ + +YG V +++Y FVH +AI+ +G+ + G
Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALKAIEETDGKEMDG- 389
Query: 437 AIKIEAAKSRKAP 475
+KIEA+ ++ P
Sbjct: 390 -LKIEASLAKPQP 401
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Frame = +2
Query: 350 RNYGFVHMENEQVGREAIQNL-NGEL-VHGQ-AIKIEAAKSRKAPSTPTTK----IFVGN 508
R + F+ E+ Q A + L +G + V G + ++ A ++ P K +++ N
Sbjct: 276 RGFAFLEYESHQAASLARRRLASGRIKVWGNIVVTVDWADPQEEPDDDAMKKVKVVYLRN 335
Query: 509 LTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 688
L+ +++E + ++G V +++Y FVH AI+E +G +DG ++
Sbjct: 336 LSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALKAIEETDGKEMDGLKIEAS 395
Query: 689 LS 694
L+
Sbjct: 396 LA 397
Score = 36.7 bits (81), Expect = 0.019
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Frame = +2
Query: 224 ESKMPGTGTFKI----FIGNLSDKTTEADLRPLFEKYGTVVE--------CDIVRNYGFV 367
E K PGTG+ K+ FIG + E +L P+FE+ G + + + + + F
Sbjct: 139 EGKPPGTGSEKVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFC 198
Query: 368 HMENEQVGREAIQNL-NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 544
N+ + A++ L N E+ G+ + + S +++FVG++ E+ E
Sbjct: 199 TFSNKDEAQNAVKKLDNKEIRPGKRLGV-------CISVANSRLFVGSIPKTKSKQEILE 251
Query: 545 LFQK 556
F K
Sbjct: 252 EFSK 255
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Frame = +2
Query: 491 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 646
K+++GNL + E+ + F++FG V + DI+R+ +GFV L + + AI++
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEK 68
Query: 647 LNGMMVDGQPMKVQLSTSRVRQRXG 721
+N V G+ + V L+ + R G
Sbjct: 69 MNQSSVGGRNITVALALDKTENRGG 93
Score = 36.3 bits (80), Expect = 0.025
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 409
K++IGNL+ + E ++ FE++G V + DI+R+ +GFV +++ AI+
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEK 68
Query: 410 LNGELVHGQAIKIEAA 457
+N V G+ I + A
Sbjct: 69 MNQSSVGGRNITVALA 84
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNG 418
+++GNL K T+ + +F K VV C ++ + Y FV E +EA ++
Sbjct: 371 LYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQEAKFRMDQ 430
Query: 419 ELVHGQAIKIEAAKSRKAPSTPTTK----IFVGNLTDKTRAPEVRELFQKFGTV 568
V + +K+ A + T IFVG+L + +R+ F+ FG +
Sbjct: 431 RTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEI 484
Score = 35.9 bits (79), Expect = 0.033
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +2
Query: 458 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDAT 619
++R P ++VGNL K + +F K VV C ++ + Y FV +
Sbjct: 359 RARYFPEEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETH 418
Query: 620 GDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRXG 721
D +A ++ V + +KV +T+ + G
Sbjct: 419 ADAQEAKFRMDQRTVMDKKLKVNWATNHPGMKRG 452
Score = 32.3 bits (70), Expect = 0.41
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQ 385
+++GNL + +L+ +F +YG+++E + + Y F++ E+
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFINARGEK 661
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG------FVHMENEQVGREAIQNLN 415
++++GNL E DL +F KYG + + D+ G FV E+ + +A++ +
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRD 321
Query: 416 GELVHGQAIKIE 451
G G I++E
Sbjct: 322 GHEFDGYRIRVE 333
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +2
Query: 491 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG------FVHLDATGDVNDAIKELN 652
+++VGNL R ++ ++F K+G + + D+ G FV + D DA+K +
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRD 321
Query: 653 GMMVDGQPMKVQ 688
G DG ++V+
Sbjct: 322 GHEFDGYRIRVE 333
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAIQNLNGELVH 430
I++G+L+ T+ L+ +FE++GT+ D++ R ++ ME + A+ L ++
Sbjct: 543 IWVGHLAKIVTQDTLQGIFEEHGTITSIDLIPPRGCAYIQMEKREDAYRALDKLRNIKLY 602
Query: 431 GQAIKIEAAKSR 466
G ++K+ A ++
Sbjct: 603 GNSVKLAWAPAK 614
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 412
+++GNL T +DL +FE+YG VV+ I+R+ F+ + Q + A+ +
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 413 NGELVHGQAIKIEAAKSR-KAP 475
N + + G+ IK AK +AP
Sbjct: 72 NKKQMFGRTIKCTIAKDNGRAP 93
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 41.1 bits (92), Expect = 9e-04
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Frame = +2
Query: 458 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECD--------IVRNYGFVHLD 613
+ +++P+ TK++V +LT V+E+F +G V D + R + +V
Sbjct: 1147 RRKRSPTPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYV 1206
Query: 614 ATGDVNDAIKELNGMMVDGQPMKVQ 688
+ A+K ++G +DGQ + VQ
Sbjct: 1207 DPEECEKALKHMDGGQIDGQEIAVQ 1231
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 41.1 bits (92), Expect = 9e-04
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREAIQNL 412
+IF+ + +TTE++LR FE+YG V E IVR+ Y F+ E+++V + +++
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQEVA-DGLRDN 67
Query: 413 NGELVHGQAIKIEAAKSRKA 472
G + + I A RK+
Sbjct: 68 KGLDFKDKVLSIGQAVRRKS 87
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +2
Query: 491 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 649
+IFV +T E+R F+++G V E IVR+ Y F+ ++ +V D +++
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQ-EVADGLRDN 67
Query: 650 NGMMVDGQPMKVQLSTSRVRQR 715
G+ + + + + R R
Sbjct: 68 KGLDFKDKVLSIGQAVRRKSSR 89
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 485 TTKIFVGNLTDKTRAPEVRELFQKFGT--VVECDIVRNYGFVHLDATGDVNDAIKELNGM 658
+ ++++G L TR +V++ F +G + E + YGFV D + D DA+ E NG
Sbjct: 2 SNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAVYECNGK 61
Query: 659 MVDGQ 673
+ G+
Sbjct: 62 KMLGE 66
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGT--VVECDIVRNYGFVHMENEQVGREAIQNLNGELV 427
++++G L T E D++ F YG + E + YGFV + +A+ NG+ +
Sbjct: 4 RVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAVYECNGKKM 63
Query: 428 HGQ 436
G+
Sbjct: 64 LGE 66
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 412
+F+ L+ TT+ DL +F ++GT++ C+++R+ Y F+ E ++ A +
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 413 NGELVHGQAIKIEAAKS 463
+ L+ + I ++ ++S
Sbjct: 182 DNVLIDDRRIHVDFSQS 198
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Frame = +2
Query: 482 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDA 637
P +FV L T ++ +F +FGT++ C+++R+ Y F+ + D A
Sbjct: 118 PDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERA 177
Query: 638 IKELNGMMVDGQPMKVQLSTS 700
+++ +++D + + V S S
Sbjct: 178 YFKMDNVLIDDRRIHVDFSQS 198
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Frame = +2
Query: 248 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNY-------GFVHMENEQVGREAIQ 406
+F ++IG LS+ TE L LF K+G V + I+R+ GFVH + V A
Sbjct: 523 SFPVWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGFVHFWSSDVAEAANV 582
Query: 407 NLNGELVHGQAIKIEAAK 460
+NG + G+ ++ + AK
Sbjct: 583 GMNGCDILGKIVETKYAK 600
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Frame = +2
Query: 392 REAIQNLNGELVHGQAIK--IEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFG 562
R+A+ LNG+ + G +K IE+ +P + +++ + NL ++E F FG
Sbjct: 212 RQAVAKLNGKTLKGVKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEAILKETFSAFG 271
Query: 563 TVVECDIV------RN----YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 685
V E + RN +GFV D A++E+N + G+P+ V
Sbjct: 272 EVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAV 322
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Frame = +2
Query: 449 EAAKSRKAPSTPT---TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YG 598
+A+ S+KA TP T IFV NL E + F++ G + IV++ G
Sbjct: 4 KASPSKKASKTPVISKTTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRG 63
Query: 599 FVHLDATGDVNDAIKELNGM-MVDGQPMKVQLSTSRVRQRXG 721
F ++ + DA+K + + + G+P+ + S + R + G
Sbjct: 64 FGYVTFALE-EDALKAKDNIKSIKGRPIHLDFSEKKARTKPG 104
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 349
+FI NLS +T+ ++ LF+++G + C +V
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVV 448
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Frame = +2
Query: 227 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV---------RNYGFVHMEN 379
SK P IF+ NL T+A+ + FE+ G + IV R +G+V
Sbjct: 12 SKTPVISKTTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFAL 71
Query: 380 EQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTP 484
E+ +A N+ + G+ I ++ ++ +KA + P
Sbjct: 72 EEDALKAKDNIKS--IKGRPIHLDFSE-KKARTKP 103
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 485 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMV 664
+T+++ G L R ++ + + +G V E + YGFV D D +D + +LNG +
Sbjct: 4 STRVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDADDCVYDLNGRNL 63
Query: 665 DGQ 673
G+
Sbjct: 64 LGE 66
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 433
+++ G L E DL YG V E + YGFV ++ + + + +LNG + G
Sbjct: 6 RVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDADDCVYDLNGRNLLG 65
Query: 434 Q 436
+
Sbjct: 66 E 66
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +2
Query: 233 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGR 394
+P +F+GNLS E L FE+ G C ++ R +G+ +++
Sbjct: 174 VPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQEGRSRGFGYADFTSKEDYN 233
Query: 395 EAIQNLNGELVHGQAIKIEAAKSR 466
+A++ LNGE G+ I+I A S+
Sbjct: 234 KALE-LNGEDCCGREIRINPANSK 256
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Frame = +2
Query: 224 ESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYG-TVVECDIV---------------RN 355
+ KM K++ GNL K T+ +L+ +FE TV + IV R
Sbjct: 41 DQKMVFADPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRG 100
Query: 356 YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 466
+GFV N + + A+++LNG+ V G+ +KI + SR
Sbjct: 101 FGFVTFANPEDAQTAVKSLNGKEVQGRTLKIAPSISR 137
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 587 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRXG 721
R +GFV D A+K LNG V G+ +K+ S SR R G
Sbjct: 99 RGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKIAPSISRGRDGGG 143
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = +2
Query: 494 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKELN 652
+FV NL + E+ ELF K G V + +V N YG+V + + A+ L+
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLD 232
Query: 653 GMMVDGQPMKVQLSTSRVRQ 712
V G+ + V LS R+
Sbjct: 233 KTEVKGRTISVALSNPPTRR 252
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +2
Query: 272 LSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIKIE 451
LS TTE DLRP+FEKYG V IV ++ +A + G + G+ I+++
Sbjct: 188 LSLYTTERDLRPVFEKYGPVEAIQIVYDH------------QAKERTTGIELDGRRIRVD 235
Query: 452 AAKSRKAPSTPTTKIFVG 505
+ +++A TPT +++G
Sbjct: 236 YSVTKRA-HTPTPGVYMG 252
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 36.7 bits (81), Expect = 0.019
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Frame = +2
Query: 359 GFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEV 538
G+V + + +AI + NGE + G I+++ A + KA + +F+GNL +
Sbjct: 15 GYVVYKAAENANQAIAS-NGEEIDGFHIRVDLASNDKAHDHQRS-VFIGNLPFDIEEEPL 72
Query: 539 RELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 685
RELF G V ++R+ +G+V ++ V A+K +N G+ ++V
Sbjct: 73 RELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALK-MNNAEFKGRKIRV 128
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 412
+FIGNL E LR LF G V ++R+ +G+V E++ A++
Sbjct: 58 VFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMN 117
Query: 413 NGELVHGQAIKIEAAKSR 466
N E G+ I++ +K +
Sbjct: 118 NAEF-KGRKIRVFPSKDK 134
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 36.7 bits (81), Expect = 0.019
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Frame = +2
Query: 437 AIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------- 592
++ + S P +P KIF+G L + +V+EL FG + ++V++
Sbjct: 657 SVHVPGVVSTVVPDSPH-KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKG 715
Query: 593 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQ 712
Y F G + AI+ LNGM + + + VQ ++ +Q
Sbjct: 716 YAFCEYVDLGITDVAIQGLNGMQLGDKKLIVQRASVGAKQ 755
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 35.9 bits (79), Expect = 0.033
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Frame = +2
Query: 164 SEKYHRFRRC*LIS*NVCVSESKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECD 343
S Y RF +C ++ + S + T ++ + L+ + E LR FEK+G + EC
Sbjct: 84 STLYFRFWKCTILDIDYGTSHF----SSTLELSVIPLTQASAEG-LRQHFEKFGELKECV 138
Query: 344 IVRNYGFVHMENEQVGREAIQNLNGE--LVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTD 517
++R+ V + G ++ +++ A +++ K T T KIF+G L+
Sbjct: 139 VMRDP--VTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKM----VTTTKKIFIGGLST 192
Query: 518 KTRAPEVRELFQKFGTV 568
T ++++ F +FG V
Sbjct: 193 NTSEEDMKKYFSQFGKV 209
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Frame = +2
Query: 485 TTKIFVGNLTDKTRA----PEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDV 628
+ K+F+ T+ ++ + + FQ FGTV+ + + +GFV D
Sbjct: 257 SAKVFIDKQTNMSKCFGECCRLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSA 316
Query: 629 NDAIKELNGMMVDGQPMKVQLSTSRVRQR 715
+AI+ +NG + + +KVQL + R
Sbjct: 317 QNAIQHMNGFQIGAKRLKVQLKRPKDANR 345
Score = 31.1 bits (67), Expect = 0.95
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 236 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 346
PG +FI +L + T+ADL F+ +GTV+ +
Sbjct: 224 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKV 260
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +2
Query: 299 LRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEA 454
L F+ +GTV+ + + +GFV +N + AIQ++NG + + +K++
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQL 337
Query: 455 AKSRKA 472
+ + A
Sbjct: 338 KRPKDA 343
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 35.1 bits (77), Expect = 0.058
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +2
Query: 260 FIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLN 415
++G L+++ E L F +G + + I R +GFV E + AI N+N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 416 GELVHGQAIKIEAAKSRK 469
+ G+ I++ AK K
Sbjct: 68 ESELFGRTIRVNLAKPMK 85
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 35.1 bits (77), Expect = 0.058
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVE 337
++FIGNL +AD+ +F KYGT++E
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILE 385
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 461 SRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 574
+R AP + ++F+GNL + +V E+F K+GT++E
Sbjct: 350 ARSAPDSH--QVFIGNLPSGVKDADVNEVFSKYGTILE 385
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 34.7 bits (76), Expect = 0.077
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI------------VRNYGFVHMEN-EQVGR 394
K+F+G L++ TTE +R F+ + E D+ R + FV N +
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEFSNGSDIID 68
Query: 395 EAIQNLNGELVHGQAIKIEAAKSRKAPS----TPTTKIFVGNLTDKTRAPEVR 541
+ N + + ++++ A R P+ T K+F+G L D+ +V+
Sbjct: 69 NIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVK 121
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 584 VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRXGH 724
+ +GFV + + N A ++LNG +VDG+ ++V L + R H
Sbjct: 123 IEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEVSLCMEQSYIRTRH 169
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 491 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 586
K+FVGN+ K RA E+++ F FG VV I+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQII 111
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 349
K+F+GN+ K +L+ F +G VV I+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQII 111
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAI-QNLNGELV 427
+++G L K TE DLR F ++G + +V +N FV + A ++ N ++
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFVCFTSRAAAEAAADRSFNKLIL 365
Query: 428 HGQAIKIEAAKSRKAPSTP 484
G+ +KI KS+ P
Sbjct: 366 KGRRLKIMWGKSQGQQPAP 384
Score = 31.9 bits (69), Expect = 0.54
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Frame = +2
Query: 446 IEAAKSRKAPSTPT----TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--RNYGFVH 607
++ A+S TPT T ++VG L K ++R+ F +FG + +V +N FV
Sbjct: 286 LKQAQSMPMLDTPTDRSITTLYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFVC 345
Query: 608 LDATGDVNDAI-KELNGMMVDGQPMKVQLSTSRVRQ 712
+ A + N +++ G+ +K+ S+ +Q
Sbjct: 346 FTSRAAAEAAADRSFNKLILKGRRLKIMWGKSQGQQ 381
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +2
Query: 479 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVND 634
T TK+FVG + ++ +R+ F +FG + E ++++ YGFV + AT D +
Sbjct: 7 TKFTKLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTM-ATSDAAE 65
Query: 635 AIKELNGMMVDGQPMKVQLS 694
+ M++G+ V L+
Sbjct: 66 LACKNKRPMIEGRQANVNLA 85
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 587 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRXG 721
R +GFV + ++ AI E +G DG+PMKV + R + G
Sbjct: 45 RGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRGERGAG 89
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 587 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 703
R +GFV + ++ AI E +G +DG+PMKV + R
Sbjct: 137 RGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPR 175
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 299 LRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIE 451
L+ +F ++G +++ ++ RN+G+ +Q AIQ L+G V G +KI+
Sbjct: 354 LKDVFSRFGNLIDVWMMKERNFGYAKFAAKQSADAAIQGLHGHDVLGMKLKID 406
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +2
Query: 536 VRELFQKFGTVV------ECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 667
+R++F KFG +V E D+ R Y F+ D A+K NG +D
Sbjct: 94 IRKVFSKFGQIVTEHYPMEKDLTRGYIFLEFSNASDAVRAVKTANGYKLD 143
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Frame = +2
Query: 251 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQ 406
F+IF G+L + T+ L F KY + ++ IVR+ YGFV ++ +A++
Sbjct: 217 FRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMR 276
Query: 407 NLN 415
+N
Sbjct: 277 EMN 279
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTV 331
K+FIG L+ TTE DL+ F YG V
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Frame = +2
Query: 494 IFVGNLTDKTRAPEVRELFQKFGTV----VECD----IVRNYGFVHLDATGDVNDAIKEL 649
+FV N+ ++ + ++ ELF +G + V D ++ Y V + + A++ L
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 650 NGMMVDGQPMKV 685
NG + GQ + V
Sbjct: 355 NGAEMLGQNISV 366
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 533 EVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMM 661
++R L+Q + V +CDI+ + + TGD +DA+K + GM+
Sbjct: 436 QLRALYQAYQHVAKCDILET---IDDELTGDYHDAVKAI-GML 474
>SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 25 VYCVGNSWSLFGVHIFNLCYILLFFVHSNPCKYYF 129
++ V S S+ G HIF + +L+ F+ S P YF
Sbjct: 294 IFLVDRSGSMSGKHIFQVKEMLILFLKSLPANCYF 328
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +2
Query: 350 RNYGFVHMENEQVGREAIQNLNGEL-----VHGQAIKIEAAKSRKA 472
RN+G+V +EQ +A++ + GE + G+A+ IE A+ +++
Sbjct: 17 RNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRALNIEYAQEKES 62
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRP-LFEKYGTV-VECDIVRNYGFVHMENEQVGREAIQNLNGELV 427
K+ I L D DL+ +F+ Y + V+N V + R I LN
Sbjct: 40 KLVITGLPDNVDLQDLKSKIFQGYDVKDLVIGHVKNTATVVFGGIEQARSVISFLNTCKY 99
Query: 428 HGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 592
H + + + +P+ P + +FVGNL + + +L +G + +VR+
Sbjct: 100 HDKTLNV-------SPAPPESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRS 147
>SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)
Length = 253
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Frame = +2
Query: 542 ELFQKFGTVVECDIVRNYG-------FVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 694
EL +K+G + E ++ N G +V D A+ +LN +GQP+ +LS
Sbjct: 90 ELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVNDLNNRWYNGQPIYAELS 147
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 482 PTTKIFVGN--LTDKTRAPEVRELFQKFGTVVECDIV--RNYGFVHLDATGDVNDAIKEL 649
PT I VGN L + +F +GT+ ++ R+Y FV + + +A++ L
Sbjct: 46 PTPHILVGNGGLMCGVDRESITRVFSLYGTLERVVMLPQRSYSFVSYKSHNNALNAMRNL 105
Query: 650 NGMMVD 667
NG +D
Sbjct: 106 NGKALD 111
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 412
I++G++ E +++ FE++GTV + R+ Y FV ++V + A +
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTM 159
Query: 413 NGELVHGQAIK 445
+ ++ G+ +K
Sbjct: 160 HNYMMFGRLLK 170
>SB_15287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 41 IRGVY-LVFIFLTCVIYCYSLYIVTHVSIISNFIYPVYSLI 160
I VY LV +++TCV +YI + +++ +I VY+L+
Sbjct: 146 ITSVYTLVDMYVTCVYTLVDVYITSVYTLVDMYITSVYTLV 186
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Frame = +2
Query: 248 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAI 403
T I + NLS++T E+DL+ LF G + + ++ + F++ + + AI
Sbjct: 180 TATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAI 239
Query: 404 QNLNGELVHGQAIKIEAAK 460
+ L+G + +E AK
Sbjct: 240 EVLSGFGYDHLILNVEWAK 258
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +2
Query: 230 KMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--YGFVHMENEQVGREAI 403
K+ +G +F+ + TE L+ F G V + +N GFV + + +AI
Sbjct: 103 KLIASGGKTVFVSGIG--LTEEILKEEFNHLGHVERVNFEKNRSQGFVTFDTWEAADKAI 160
Query: 404 QNLNGELVHGQAIKIEAAKSRKAPS 478
+NG V Q + I + +R+ P+
Sbjct: 161 DEMNGLKV--QHVHIRVSMARRQPN 183
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +2
Query: 254 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNL 412
++F+G + E +L P+FE G + E ++ R Y FV ++ + ++ L
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKTL 134
Query: 413 NG-ELVHGQAIKI 448
N E+ G+ I +
Sbjct: 135 NNYEIRKGKCIGV 147
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 245 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 355
G + + NL+ +TT DL+ +F+KYG + + I R+
Sbjct: 14 GMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRD 50
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 257 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 355
+ I NL E DL+ L + YG V+ C+I R+
Sbjct: 121 LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERD 153
>SB_43380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 4 FCSGV--RHVYCVGNSWSLFGVHIFNLCYILLFFVHSNP 114
F SG+ H+ W + +H+ N Y+L F S P
Sbjct: 196 FSSGIYIHHLGYKATFWGILSLHLINFIYLLFFLPESMP 234
>SB_38994| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 467
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +2
Query: 218 VSESKMPGTGTFKIFIGNLSDKTTEADLR-PLFEKYGTVVECDIVRNYGFVH----MENE 382
++ES T FK+ G+ DKT +R L + EC V +YGF H + N+
Sbjct: 44 IAESMKNITKNFKLGFGSFVDKTVSPYVRTELTKPCSDTSEC--VASYGFKHILPLVRND 101
Query: 383 QVGREAI--QNLNGEL 424
+ +E + Q ++G L
Sbjct: 102 TMFKEKVNEQKISGNL 117
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,120,190
Number of Sequences: 59808
Number of extensions: 427393
Number of successful extensions: 1326
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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