Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o24
         (159 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p...    25   5.5  
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z70267-4|CAA94210.1|  314|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ...    25   5.5  
U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical pr...    25   9.6  

>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
            T01H8.5d protein.
          Length = 1931

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 89   SLKVFITNNVFKKPLDFNSDC 151
            SLK+F+ N+  +K  DF  DC
Sbjct: 1522 SLKLFLDNDQIEKLHDFEEDC 1542


>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
            T01H8.5c protein.
          Length = 1971

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 89   SLKVFITNNVFKKPLDFNSDC 151
            SLK+F+ N+  +K  DF  DC
Sbjct: 1562 SLKLFLDNDQIEKLHDFEEDC 1582


>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
            T01H8.5a protein.
          Length = 2032

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 89   SLKVFITNNVFKKPLDFNSDC 151
            SLK+F+ N+  +K  DF  DC
Sbjct: 1623 SLKLFLDNDQIEKLHDFEEDC 1643


>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
            protein T01H8.5d protein.
          Length = 1931

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 89   SLKVFITNNVFKKPLDFNSDC 151
            SLK+F+ N+  +K  DF  DC
Sbjct: 1522 SLKLFLDNDQIEKLHDFEEDC 1542


>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
            T01H8.5c protein.
          Length = 1971

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 89   SLKVFITNNVFKKPLDFNSDC 151
            SLK+F+ N+  +K  DF  DC
Sbjct: 1562 SLKLFLDNDQIEKLHDFEEDC 1582


>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
            T01H8.5a protein.
          Length = 2032

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 89   SLKVFITNNVFKKPLDFNSDC 151
            SLK+F+ N+  +K  DF  DC
Sbjct: 1623 SLKLFLDNDQIEKLHDFEEDC 1643


>Z70267-4|CAA94210.1|  314|Caenorhabditis elegans Hypothetical
           protein K04C1.3 protein.
          Length = 314

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/42 (23%), Positives = 22/42 (52%)
 Frame = -3

Query: 136 IQRFLEHVIRDEHF*AFPAYRIHRGRHXTFRHFENIQTKQAY 11
           ++ +L+H I+ E         IH+  + + +   N+QT+ +Y
Sbjct: 84  LRHYLQHFIKIEEARYMQLGVIHKDNYASLKEAMNVQTRSSY 125


>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
            homologous cationchannel protein.
          Length = 1971

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 89   SLKVFITNNVFKKPLDFNSDC 151
            SLK+F+ N+  +K  DF  DC
Sbjct: 1562 SLKLFLDNDQIEKLHDFEEDC 1582


>U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical
           protein C28F5.4 protein.
          Length = 856

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 77  ISRESLKVFITNNVFKKPLDFNS 145
           IS ESLK  +TN+ F +P D ++
Sbjct: 558 ISFESLKRTLTNHAFSQPHDLSA 580


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,246,404
Number of Sequences: 27780
Number of extensions: 42839
Number of successful extensions: 106
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 12,740,198
effective HSP length: 33
effective length of database: 11,823,458
effective search space used: 224645702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)