Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o20
         (609 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g22550.1 68417.m03255 phosphatidic acid phosphatase-related /...    33   0.11 
At4g40080.1 68417.m05674 epsin N-terminal homology (ENTH) domain...    30   1.4  
At1g67550.1 68414.m07696 urease, putative / urea amidohydrolase,...    29   1.8  
At2g32620.1 68415.m03982 cellulose synthase family protein simil...    28   5.6  
At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR...    28   5.6  
At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identica...    27   7.4  
At1g69450.1 68414.m07980 early-responsive to dehydration protein...    27   9.7  

>At4g22550.1 68417.m03255 phosphatidic acid phosphatase-related /
           PAP2-related contains Pfam profile PF01569: PAP2
           superfamily
          Length = 213

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +1

Query: 478 RRRRPVPMNKLME--VGPDKFSFPSGHASRAVLISFILIYFDSVS 606
           RR RP   +  M   V  D +SFPSGHASR   ++  + +F + +
Sbjct: 88  RRARPAYNHPSMSAAVSADHYSFPSGHASRVFFVAASVHFFSAAA 132


>At4g40080.1 68417.m05674 epsin N-terminal homology (ENTH)
           domain-containing protein / clathrin assembly
           protein-related contains Pfam PF01417: ENTH domain. ENTH
           (Epsin N-terminal homology) domain; similar to CLATHRIN
           COAT ASSEMBLY PROTEIN AP180 - Mus musculus,
           SWISSPROT:Q61548
          Length = 365

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 256 TKTFVDRALKITALKSLRNHSQLLEISCHGIVWLAGWLTFIW 381
           T +F D    + ALK L +  + L   CHG  W  GW+   W
Sbjct: 251 TLSFGDTIELVCALKRLESCKERLSEICHG-NWKRGWIDGFW 291


>At1g67550.1 68414.m07696 urease, putative / urea amidohydrolase,
           putative similar to SP|P07374 Urease (EC 3.5.1.5) (Urea
           amidohydrolase) {Canavalia ensiformis}; contains Pfam
           profile PF01979: Amidohydrolase family
          Length = 838

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 20/73 (27%), Positives = 36/73 (49%)
 Frame = +1

Query: 127 EIVQLVHLW*KK*ASTMDMLGETEKKRQTPPMLKKILQYDVQITKTFVDRALKITALKSL 306
           +I++ +    K  A  MD+  +   +RQ  P +  +L Y VQ+  TF D    +T  + +
Sbjct: 42  QILEFIRDGDKSVAELMDIGRQLLGRRQVLPAVLHLL-YTVQVEGTFRDGTKLVTVHEPI 100

Query: 307 RNHSQLLEISCHG 345
              +  LE++ HG
Sbjct: 101 SLENGNLELALHG 113


>At2g32620.1 68415.m03982 cellulose synthase family protein similar
           to Zea mays cellulose synthase-5 [gi:9622882], -4
           [gi:9622880], -9 [gi:9622890]
          Length = 757

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
 Frame = +1

Query: 259 KTFVDRALKITALK---SLRNHSQLLEISCHGIVWLAGWL-----TFIWLFNS 393
           K+++ RA+ +T L    SL  H ++L +S +GI+WL  +L     +F+WL ++
Sbjct: 18  KSYILRAVDLTILGLLFSLLLH-RILYMSQNGIIWLVAFLCESCFSFVWLLST 69


>At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1109

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 229  KILQYDVQITKTFVDRALKITALKSLRNHSQLLEISCH 342
            KIL+  V+I     +R+ K T  + LR+H+++L+   H
Sbjct: 968  KILECGVRILTNEPERSSKKTVSRGLRSHAKILKACLH 1005


>At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identical
           to diacylglycerol kinase 1 (Diglyceride kinase 1, DGK 1,
           DAG kinase 1) [Arabidopsis thaliana] SWISS-PROT:Q39017
          Length = 728

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 197 SVSPNISIVLAYFFYHKCTNC 135
           S+SP+ +IV +  F+H+CT C
Sbjct: 101 SMSPSQAIVASESFFHRCTIC 121


>At1g69450.1 68414.m07980 early-responsive to dehydration
           protein-related / ERD protein-related low similarity to
           ERD4 protein (early-responsive to dehydration stress)
           [Arabidopsis thaliana] GI:15375406; contains Pfam
           profile PF02714: Domain of unknown function DUF221
          Length = 646

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 313 HSQLLEISCHGIVWLAGW-LTFIWLFNSKDLYQLQV 417
           HS + + +C+ ++W   W + F  +F+    Y+L V
Sbjct: 367 HSDIQKSACNKVIWFTIWNVFFATVFSGSAFYKLSV 402


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,237,733
Number of Sequences: 28952
Number of extensions: 226329
Number of successful extensions: 455
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)