Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o19
         (468 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   4.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   7.0  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 237 GMDSSPSHSWDCVSIGKELDHLYL 308
           G+++ P H W  +SI    +H+Y+
Sbjct: 183 GVNTIPEHRWRIISIYSYSNHVYI 206


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 333 PESSCSFLLNINDPILFQSRHNPMNVKVRNPCH 235
           PE++    L  ND + FQS  +P + K     H
Sbjct: 68  PENTVRLRLQCNDGLFFQSSLSPGSFKQLTKLH 100


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 256 EGEESMPQKSNCRDWLFLMTKIFKSP 179
           +GEE +      R+WL+L++    +P
Sbjct: 525 KGEEGLDYGGVAREWLYLLSHEMLNP 550


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,587
Number of Sequences: 2352
Number of extensions: 9554
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)