Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11o18
(632 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0309 - 20100231-20100307,20100362-20100503,20100588-201009... 31 0.76
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421... 30 1.3
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 30 1.8
09_04_0527 - 18337968-18338077,18338440-18341212 29 4.1
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 28 5.4
10_06_0004 - 9407954-9408007,9408219-9408386,9408441-9408542,940... 28 5.4
08_01_0253 + 2072766-2072954,2073526-2073591,2073755-2073877,207... 28 5.4
06_01_0667 + 4878784-4878900,4879016-4879118,4879256-4879341,487... 28 5.4
03_01_0401 - 3108477-3108689,3108787-3108933,3109022-3109234,310... 28 5.4
12_02_0928 + 24488891-24489675,24490369-24490421,24490479-244912... 27 9.4
10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282... 27 9.4
06_03_0765 + 24421982-24422120,24422287-24422367,24422722-244229... 27 9.4
06_03_0189 - 17697779-17698939 27 9.4
04_04_0348 + 24568834-24568904,24569019-24569148,24569310-245694... 27 9.4
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 27 9.4
>05_04_0309 -
20100231-20100307,20100362-20100503,20100588-20100967,
20101049-20101076,20101182-20101306,20101402-20101457,
20101709-20101791,20101881-20101949,20102050-20102640
Length = 516
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 280 PVLELSPRVLRKRKSL--MPEKSKPSNRRVNMKPRKHVVAENANPKQIEALYLNKTVKSL 453
P +E+ R+ R++ ++ P S R+ +P V E+A PK + L N +++
Sbjct: 419 PFVEMKSRLAREQVAVERKPAASHVDKSRLPAQPSAGVKLESAKPKIYDGLESNSRLEAA 478
Query: 454 SQTLETIYEE 483
+ L+ Y+E
Sbjct: 479 KRRLQERYQE 488
>05_05_0034 -
21741148-21741275,21741890-21741928,21742007-21742121,
21742227-21742292,21743213-21743371,21743573-21743609,
21743757-21744194,21744735-21744817,21744920-21744956,
21745146-21745214,21745316-21745407,21745481-21745565,
21745903-21745982,21746327-21746724,21746813-21747717,
21747825-21747915,21748617-21750680,21750681-21750749,
21750850-21751273,21751644-21751763
Length = 1832
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 268 KINTPVLELSPRVLRKRKSLMPEKSKPSNRR-VNMKPRKHVVAENANPKQIE 420
K+ T + P+V+R+ + + S S + +N KP++ V +N NP +E
Sbjct: 353 KLKTRRRKHRPKVIREDRPAKKQMSTTSKEKPLNQKPKRKYVWKNRNPSSLE 404
>05_05_0030 -
21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 268 KINTPVLELSPRVLRKRKSLMPEKSKPSNRR-VNMKPRKHVVAENANPKQIE 420
K+ T + P+V+R+ + + + S + +N KP++ V +N NP +E
Sbjct: 358 KLKTRRRKHRPKVIREDRPAKKQMATTSEEKPLNQKPKRKYVRKNRNPSSLE 409
>09_04_0527 - 18337968-18338077,18338440-18341212
Length = 960
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/78 (20%), Positives = 41/78 (52%)
Frame = +1
Query: 232 IMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPK 411
+ +DE+ T +IN ++ELS R+ R + ++ S P+ + + + ++ + +
Sbjct: 122 LFSLDEIATKADRINRQLMELSKRLGRWTQPILSGGSIPATKYDTEQQQLYLPGHDYSIT 181
Query: 412 QIEALYLNKTVKSLSQTL 465
E + ++K ++L ++L
Sbjct: 182 DAELVGIDKNRQTLIESL 199
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 244 DELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRR 360
DE +T + NT S R R++K + EKSKP N+R
Sbjct: 963 DEAST---RCNTSNRTPSRRTSRRKKGVSAEKSKPKNKR 998
>10_06_0004 -
9407954-9408007,9408219-9408386,9408441-9408542,
9408710-9408934,9409889-9410047,9411768-9411900,
9412827-9413758,9413842-9413987,9415863-9416082
Length = 712
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 334 LALTTFFYAKLLVIIQEQVC*F*EHLCSARPLPL 233
L TT Y LV IQ+ +C +HL A+PL +
Sbjct: 657 LKFTTDMYLTCLVFIQDILCHLRKHLTFAKPLQI 690
>08_01_0253 +
2072766-2072954,2073526-2073591,2073755-2073877,
2073913-2074017,2074555-2074635,2074715-2074807,
2075023-2075098,2075182-2075261,2075359-2075430,
2075553-2075612,2075775-2075871,2076137-2076200,
2076303-2076362,2076539-2076608
Length = 411
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 421 PLFALGSHFRRQRVYEVSYSLGGLKVCFFLALTTFFYAKLLVIIQE 284
PL+A+G +F YEV ++GG +V + L +A L I E
Sbjct: 39 PLYAIGFNFLDFHYYEVFATVGGNRVTTYSCLKDGNFAILQAYIDE 84
>06_01_0667 +
4878784-4878900,4879016-4879118,4879256-4879341,
4879434-4879496,4879589-4879831,4880639-4880728,
4881403-4881600
Length = 299
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 434 LRYNASICFGFAFSATTCLRGFIF 363
L AS CFGFAF++ + G IF
Sbjct: 238 LNLAASFCFGFAFTSREAVTGSIF 261
>03_01_0401 -
3108477-3108689,3108787-3108933,3109022-3109234,
3109321-3109938,3110045-3110584,3110941-3111041,
3111208-3111325,3111450-3111535,3111888-3112002
Length = 716
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +2
Query: 164 DAEKT---WNTREWSASYQLKWHI 226
D EKT W +W+ S LKWHI
Sbjct: 544 DFEKTLEYWQQDKWNGSLSLKWHI 567
>12_02_0928 +
24488891-24489675,24490369-24490421,24490479-24491229,
24491322-24491533,24491780-24492570,24492686-24492784
Length = 896
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 1 EMVLLGFAAAIRYAPPFCLTLR 66
E+++L FA+++ Y PPF T++
Sbjct: 617 EVLILNFASSVYYLPPFIATMQ 638
>10_08_0838 -
20927020-20927207,20927288-20927491,20927654-20928297,
20928549-20928788,20928884-20928978,20929087-20929434,
20929824-20930042,20930422-20930487,20931191-20931362,
20931456-20931703,20931933-20932073,20932238-20932330,
20932421-20932471,20933571-20933693,20933793-20934035,
20934131-20934211,20935245-20935340,20935535-20936320,
20936443-20937012,20937322-20937427,20938102-20938206,
20938311-20938432,20939321-20939413,20940081-20940104
Length = 1685
Score = 27.5 bits (58), Expect = 9.4
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +1
Query: 175 NMEHSRVECELPTKMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKS-LMPEKSKPS 351
N+E R+ C +M ++ + E K + L+ + VL+ L + ++ +
Sbjct: 148 NIEAKRLGCMYINEM---ELRKETEAKLSQEKEESESLKHATMVLQNDLDWLKYQLNEKA 204
Query: 352 NRRVNMKPRKHVVAENANPKQIEALYLNKTVK---SLSQTLETIYEEPKAESGD 504
NR ++ +KH++ + A YL +++K S Q+L+ Y + K E D
Sbjct: 205 NRLQDLNQQKHLLEHRISESDSVATYLEESMKVTESRVQSLKLEYSKMKRERDD 258
>06_03_0765 +
24421982-24422120,24422287-24422367,24422722-24422962,
24423078-24423171,24423513-24423729,24423818-24423909,
24424303-24424638
Length = 399
Score = 27.5 bits (58), Expect = 9.4
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Frame = +1
Query: 235 MEVDELNTDVPKINTPVLELSPRVLRKRK-----SLMPEKSKPSNRRV------NMKPRK 381
M V +T V +NT VL RV RKR S PE+ S+ NM
Sbjct: 146 MAVPGCSTMVGPMNTEVLPRRVRVCRKRTAKPRGSECPEQLPDSSNAAKTDTDRNMSVIF 205
Query: 382 HVVAENANPKQIEALYLNKTVKSLSQTLETIY 477
V+ + N + +E L LN+ KS +QT+E I+
Sbjct: 206 DVLRKKKNAR-LENLVLNR--KSFAQTVENIF 234
>06_03_0189 - 17697779-17698939
Length = 386
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 385 VVAENANPKQIEALYLNKTVKSLSQTLETIYEEPKAESGD-TEAFGARKIKR 537
VVA PKQ E L + + T T Y++ G+ T A G+R +R
Sbjct: 111 VVAPPPPPKQQEVLQVQQQPPPADNTQPTTYQQGSGGDGESTRAGGSRSARR 162
>04_04_0348 + 24568834-24568904,24569019-24569148,24569310-24569459,
24569546-24569650,24569808-24570029,24570162-24570274,
24570371-24570470,24571125-24571325,24571401-24571549,
24571624-24571765,24571851-24571991,24572098-24572286,
24572622-24572835,24573198-24573291,24573671-24573905,
24574242-24574433,24574919-24575017,24575443-24575532,
24575709-24575912,24575994-24576269,24576974-24577096,
24577453-24577608,24577686-24577802,24577878-24577957,
24578173-24578377,24578485-24578687,24578882-24578933
Length = 1350
Score = 27.5 bits (58), Expect = 9.4
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Frame = +1
Query: 184 HSRVECELPTKMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRV 363
HS E + ++ + + ++ E+ KI+TP++ L+ EK S R V
Sbjct: 1019 HSSFEESIAANISGISVKQLQEIINAAKKISTPII---------TAELLSEKDVLSARIV 1069
Query: 364 NMKPRKHVVAENANPKQI--EALYLNKTVKSLSQTLETIYEEPKAESGDTEAFGARKIK 534
K V+ E A +I ++ N VK Q +E ++ A+S KIK
Sbjct: 1070 KGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIK 1128
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 211 TKMAHLDIMEV-DELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHV 387
TK AH + E +EL+ +V + + +LS V R +++ ++ R + V
Sbjct: 1011 TKKAHANAQERNEELSKEVEDADGKIKQLSDTVQRLEETIQEREALLLAERQEKEEASAV 1070
Query: 388 VAENANPKQIEALYLNKTVKSLSQTLETI 474
+AE+ + A L K + ET+
Sbjct: 1071 IAESQARNEAFASKLEDAEKQIDLLQETV 1099
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,793,677
Number of Sequences: 37544
Number of extensions: 277507
Number of successful extensions: 655
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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