Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11o18
(632 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069394-1|AAL39539.1| 299|Drosophila melanogaster LD10005p pro... 33 0.24
AF218585-1|AAF26736.1| 299|Drosophila melanogaster tantalus pro... 33 0.24
AE014296-1053|AAF50710.2| 299|Drosophila melanogaster CG6586-PA... 33 0.24
AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpressio... 29 4.0
AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA... 29 4.0
AY455866-1|AAR19767.1| 583|Drosophila melanogaster putative cho... 29 5.2
AY102683-1|AAM27512.1| 545|Drosophila melanogaster LD23890p pro... 29 5.2
AE013599-3906|AAS64770.1| 545|Drosophila melanogaster CG3522-PB... 29 5.2
AE013599-3905|AAF47232.2| 583|Drosophila melanogaster CG3522-PA... 29 5.2
>AY069394-1|AAL39539.1| 299|Drosophila melanogaster LD10005p
protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 361 VNMKPRKHVVAENANPKQIEALYLNKTVKSLSQT-LETIYEEPKAES 498
+ K RK + K IE +Y ++ +K + T LETI+EEP E+
Sbjct: 126 IKKKQRKELNTNAQTLKSIEKIYTSRRMKKFTPTNLETIFEEPSDEN 172
>AF218585-1|AAF26736.1| 299|Drosophila melanogaster tantalus
protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 361 VNMKPRKHVVAENANPKQIEALYLNKTVKSLSQT-LETIYEEPKAES 498
+ K RK + K IE +Y ++ +K + T LETI+EEP E+
Sbjct: 126 IKKKQRKELNTNAQTLKSIEKIYTSRRMKKFTPTNLETIFEEPSDEN 172
>AE014296-1053|AAF50710.2| 299|Drosophila melanogaster CG6586-PA
protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 361 VNMKPRKHVVAENANPKQIEALYLNKTVKSLSQT-LETIYEEPKAES 498
+ K RK + K IE +Y ++ +K + T LETI+EEP E+
Sbjct: 126 IKKKQRKELNTNAQTLKSIEKIYTSRRMKKFTPTNLETIFEEPSDEN 172
>AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpression
suppressor of ras 4 protein.
Length = 1106
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 178 MEHSRVECELPTKMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNR 357
++ R + ++ TK IM L VP++ P L P+ +R+ + + P N
Sbjct: 867 LDIERTKADIITKKQSKIIMANAHLENVVPQVVDPPQHLQPQQEEQRRWSLTPPASPHNN 926
Query: 358 RVNM-KPRKHVVAE 396
VN+ +P ++ E
Sbjct: 927 HVNLPEPPPALITE 940
>AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA
protein.
Length = 2171
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 178 MEHSRVECELPTKMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNR 357
++ R + ++ TK IM L VP++ P L P+ +R+ + + P N
Sbjct: 868 LDIERTKADIITKKQSKIIMANAHLENVVPQVVDPPQHLQPQQEEQRRWSLTPPASPHNN 927
Query: 358 RVNM-KPRKHVVAE 396
VN+ +P ++ E
Sbjct: 928 HVNLPEPPPALITE 941
>AY455866-1|AAR19767.1| 583|Drosophila melanogaster putative
cholesterol transporter protein.
Length = 583
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 462 CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFH 367
CL F+ V + L+L+ + I GDN+FT FH
Sbjct: 64 CLFVTFD-LVFVSLLWLICIVINGDNIFTAFH 94
>AY102683-1|AAM27512.1| 545|Drosophila melanogaster LD23890p
protein.
Length = 545
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 462 CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFH 367
CL F+ V + L+L+ + I GDN+FT FH
Sbjct: 64 CLFVTFD-LVFVSLLWLICIVINGDNIFTAFH 94
>AE013599-3906|AAS64770.1| 545|Drosophila melanogaster CG3522-PB,
isoform B protein.
Length = 545
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 462 CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFH 367
CL F+ V + L+L+ + I GDN+FT FH
Sbjct: 64 CLFVTFD-LVFVSLLWLICIVINGDNIFTAFH 94
>AE013599-3905|AAF47232.2| 583|Drosophila melanogaster CG3522-PA,
isoform A protein.
Length = 583
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 462 CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFH 367
CL F+ V + L+L+ + I GDN+FT FH
Sbjct: 64 CLFVTFD-LVFVSLLWLICIVINGDNIFTAFH 94
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,418,434
Number of Sequences: 53049
Number of extensions: 499863
Number of successful extensions: 1530
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -