Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11o18
(632 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18890.1 68416.m02399 expressed protein similar to UV-B and o... 36 0.017
At2g37370.1 68415.m04583 hypothetical protein 34 0.090
At4g04530.1 68417.m00660 Ulp1 protease family protein (snoR29) c... 31 0.84
At5g53020.1 68418.m06585 expressed protein 30 1.1
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 30 1.1
At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family... 30 1.1
At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related... 29 1.9
At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-contain... 29 3.4
At3g43210.1 68416.m04561 kinesin motor family protein (NACK2) co... 28 4.5
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 28 5.9
At3g17330.1 68416.m02215 expressed protein contains Pfam profile... 28 5.9
At3g13460.2 68416.m01694 expressed protein contains Pfam profile... 28 5.9
At3g13460.1 68416.m01693 expressed protein contains Pfam profile... 28 5.9
At2g27230.1 68415.m03272 transcription factor-related contains w... 28 5.9
At1g55500.1 68414.m06349 expressed protein contains Pfam profile... 28 5.9
At1g48110.1 68414.m05369 expressed protein contains Pfam profile... 28 5.9
At3g07540.1 68416.m00900 formin homology 2 domain-containing pro... 27 7.8
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 27 7.8
>At3g18890.1 68416.m02399 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 641
Score = 36.3 bits (80), Expect = 0.017
Identities = 25/92 (27%), Positives = 40/92 (43%)
Frame = +1
Query: 214 KMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVA 393
K L ++ E+ + TP+ +L ++ KR + P K+ + + V P K V
Sbjct: 296 KNPQLSFSKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQ 355
Query: 394 ENANPKQIEALYLNKTVKSLSQTLETIYEEPK 489
E PK+ EA K VK + YE+ K
Sbjct: 356 EPTAPKEDEAPPKEKNVKPRPLSPYASYEDLK 387
>At2g37370.1 68415.m04583 hypothetical protein
Length = 697
Score = 33.9 bits (74), Expect = 0.090
Identities = 27/120 (22%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Frame = +1
Query: 172 KNMEHSRVECELPTKMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPS 351
K E ++E ++ ++ L+I++ D L ++ ++NT + R LR + + S
Sbjct: 341 KTTEVGQLEKDVAAELKKLEILKED-LEAELKRVNTSITSARAR-LRNAQEEREQFDNAS 398
Query: 352 NR-RVNMKPRKHVVAENANPKQIEALYLNKTVKSLSQT--LETIYEEPKAE--SGDTEAF 516
N +++K ++ + + ++EA +NK +K L T L++ + + K SG+ E +
Sbjct: 399 NEILMHLKSKEEELTRSITSCRVEADVVNKWIKFLEDTWILQSKFSQQKDNQVSGEMERY 458
>At4g04530.1 68417.m00660 Ulp1 protease family protein (snoR29)
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain; snoR29 gene for small
nucleolar RNA GI:15706258
Length = 917
Score = 30.7 bits (66), Expect = 0.84
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +1
Query: 259 DVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQIEALYLNK 438
D +I+ P L P+++ +R+S MP + S+ + N P A+ N Q +A
Sbjct: 472 DEGQISDPAKNLDPKIVPERQSNMPSRIADSSSK-NPAPSGQTHAQLLNALQQQAW---S 527
Query: 439 TVKSLSQTLETIYEEPKAESGDTEA 513
LS+ ++ I + + SG +A
Sbjct: 528 NYGGLSEVIKNINQSHASSSGPPQA 552
>At5g53020.1 68418.m06585 expressed protein
Length = 721
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +1
Query: 313 KRKSLMPEKSKPSNRRVNMKPRKHVVAENANP---KQIEALYLNKTVKSLSQTLETIYEE 483
+ + L+PE + N K K +++ +NP + AL ++ +K L Q L +
Sbjct: 486 ENERLLPENECTKREKANSKESKSLISSTSNPPWRMDLHALGVSYKIKRLKQQLMMLERY 545
Query: 484 -PKAESGDTEAFGARKIKRLL 543
K ES +TE + KR L
Sbjct: 546 IGKPESQETEKNSSDTGKRAL 566
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 262 VPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPK--QIEALYLN 435
+P+I P L P V + +PE KP ++ P+ + + PK +I+ L
Sbjct: 230 MPEIQKPELPKLPEVPKLEAPKVPEIQKPELPKMPELPKMPEIQKPELPKMPEIQKPELP 289
Query: 436 KTVKSLSQTLETIYEEPKAES 498
K + L T+ E PK+E+
Sbjct: 290 KVPEVPKPELPTVPEVPKSEA 310
>At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family
protein (ROS1) similar to DEMETER protein [Arabidopsis
thaliana] GI:21743571; contains Pfam profile PF00730:
HhH-GPD superfamily base excision DNA repair protein
Length = 1393
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = +1
Query: 238 EVDELNTDVPKINTPVLELSPRVLRKR-KSLMPEKSKPSNRRVNMKPRKHVVAENANPKQ 414
EV+ L++ + +L+ + RK+ + + ++KP PRK VV + K
Sbjct: 95 EVESLSSVSNNVAEQILKTPEKPKRKKHRPKVRREAKPKREPKPRAPRKSVVTDGQESKT 154
Query: 415 IEALYLNKTVKSLSQTLETIYEEPKAESGDTEAFGARKIKRLLTFQLGN 561
+ Y+ K V+ +S+ + E A + +T R +R+L F+ N
Sbjct: 155 PKRKYVRKKVE-VSKDQDATPVESSA-AVETSTRPKRLCRRVLDFEAEN 201
>At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related
protein (PAKRP1)
Length = 1292
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +1
Query: 265 PKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQIEALYLNKTV 444
P + +P L +SP + RKSL + S+ S +++V E A+P + +N
Sbjct: 669 PVLKSPTLSVSPTIRNSRKSL--KTSELSTASQKDSEGENLVTEAADPSPATSKKMNNCS 726
Query: 445 KSLSQTLETIY 477
+LS ++
Sbjct: 727 SALSTQKSKVF 737
>At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-containing
protein-related / RhoGAP domain-containing protein
contains Pfam domain, PF00620: RhoGAP domain
Length = 902
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 235 MEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQ 414
+EVDE N D+ ++ + LEL R+ + KS ++ R+ + R+ + ++ Q
Sbjct: 575 VEVDEDNADIERLESTKLELQSRITEEVKSNAVLQASLERRKKALYGRRQALEQDVGRLQ 634
>At3g43210.1 68416.m04561 kinesin motor family protein (NACK2)
contains Pfam profile: PF00225 kinesin motor domain
Length = 938
Score = 28.3 bits (60), Expect = 4.5
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Frame = +1
Query: 316 RKSLMPEKSKPSNRRVNMKPRKHVVAE---NANPKQI--EALYLNKTVKSL----SQTLE 468
++ +P KS PS+RR RK V + +A+P + E L K K L +Q L+
Sbjct: 451 KEESIPSKSVPSSRRTARDRRKDNVRQSLTSADPTALVQEIRLLEKHQKKLGEEANQALD 510
Query: 469 TIYEEPKAES-GDTEAFGARKIKRLLT 546
I++E + GD +A A K+ ++L+
Sbjct: 511 LIHKEVTSHKLGDQQA--AEKVAKMLS 535
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 418 EALYLNKTVKSLSQTLETIYEEPKAESGDTEAFGARKIKRLLTFQLG 558
E +++NK + +L + + +E K + G + K+ RLL LG
Sbjct: 280 EGIHINKGLLALGNVISALGDEKKRKEGGHVPYRDSKLTRLLQDSLG 326
>At3g17330.1 68416.m02215 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 595
Score = 27.9 bits (59), Expect = 5.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 179 WNTREWSASYQLKWHI 226
W +WS S+ +KWHI
Sbjct: 353 WQQDKWSGSFPVKWHI 368
>At3g13460.2 68416.m01694 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 664
Score = 27.9 bits (59), Expect = 5.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 179 WNTREWSASYQLKWHI 226
W +W+ S+ LKWHI
Sbjct: 518 WQQDKWTGSFPLKWHI 533
>At3g13460.1 68416.m01693 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 667
Score = 27.9 bits (59), Expect = 5.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 179 WNTREWSASYQLKWHI 226
W +W+ S+ LKWHI
Sbjct: 521 WQQDKWTGSFPLKWHI 536
>At2g27230.1 68415.m03272 transcription factor-related contains weak
similarity to anthocyanin 1 (GI:10998404) [Petunia x
hybrida]; identical to cDNA bHLH transcription factor
(bHLH delta gene) gi:32563001
Length = 650
Score = 27.9 bits (59), Expect = 5.9
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +1
Query: 289 ELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQIEALYLNKTVKSLSQTLE 468
E SPR++ K E +KP+N R +KP EN P+ + + VK L + +
Sbjct: 434 EGSPRMVNKN-----ETAKPANNRKRLKP-----GENPRPRPKDRQMIQDRVKELREII- 482
Query: 469 TIYEEPKAESGDTEAFGARKIKRLLTFQ 552
P +A R IK +L Q
Sbjct: 483 -----PNGAKCSIDALLERTIKHMLFLQ 505
>At1g55500.1 68414.m06349 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 549
Score = 27.9 bits (59), Expect = 5.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 179 WNTREWSASYQLKWHI 226
W +W+ S+ LKWHI
Sbjct: 437 WQQDKWTGSFPLKWHI 452
>At1g48110.1 68414.m05369 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 639
Score = 27.9 bits (59), Expect = 5.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 179 WNTREWSASYQLKWHI 226
W +WS S+ +KWHI
Sbjct: 404 WQQDKWSGSFPVKWHI 419
>At3g07540.1 68416.m00900 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 841
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 313 KRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQ 414
K K L +K +PS+RR N R + NAN KQ
Sbjct: 478 KLKPLPWDKVRPSSRRTNTWDRLPYNSSNANSKQ 511
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 322 SLMPEKSKPSNRRVNMKPRKHVVAENANPKQIEALYLNKTVKSLSQTLETIYEEPK-AES 498
+L PEK+ P+N+ ++ +P+K + ++P I + K + +E ++ K +ES
Sbjct: 429 ALCPEKAVPTNQDLDTEPKKETEEDVSSPADI----IEKAITEEKHVVEEPSKDEKTSES 484
Query: 499 G 501
G
Sbjct: 485 G 485
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,431,725
Number of Sequences: 28952
Number of extensions: 242758
Number of successful extensions: 663
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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