Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11o15
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 64 2e-11
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 62 5e-11
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 42 1e-04
SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 29 0.61
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 28 1.4
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 27 2.5
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 27 3.3
SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr 2||... 26 4.3
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 7.6
SPAC13D6.03c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 25 10.0
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 25 10.0
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 25 10.0
SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr 2... 25 10.0
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 25 10.0
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 63.7 bits (148), Expect = 2e-11
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Frame = +2
Query: 188 EQLKPEYLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKYAKGSSL-YPEDPKARAL 355
EQ PE+L LNP VPTL+D + +IWES AI+ YL +KY + P D
Sbjct: 40 EQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYK 99
Query: 356 VDQRLYFDI---GTLYQRFSDY-FYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVA 523
V Q L+F G ++ + + Y Q + + +NE ++ L +L+ L+ + Y+
Sbjct: 100 VIQYLFFQASGQGIIWGQAGWFSVYHQELVISAITRYRNE-IKRVLGVLEDILKDRDYLV 158
Query: 524 GPNLTVADLSLIASVSSLE 580
T+ADLS I+ + LE
Sbjct: 159 ANRFTIADLSFISWNNFLE 177
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 62.5 bits (145), Expect = 5e-11
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 10/135 (7%)
Frame = +2
Query: 185 GEQLKPEYLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKY--AKGSSLYPEDPKAR 349
GEQ E+L LNP VPTLVD + +IWES AI+ YL +KY + SL +DP+
Sbjct: 39 GEQKCKEHLALNPNGRVPTLVDHKNNDYTIWESDAILIYLADKYDTDRKISLSFDDPEYY 98
Query: 350 ALVDQRLYFDI---GTLYQR--FSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQK 514
L+ Q L+F G ++ + + ++F+ + A + +NE ++ L +L+ L+ +
Sbjct: 99 KLI-QYLFFQASGQGVIWGQAGWFNFFHHEPVVSA-VTRYRNE-IKRVLGVLEDILKDRD 155
Query: 515 YVAGPNLTVADLSLI 559
Y+ T+ADLS I
Sbjct: 156 YLVANKYTIADLSFI 170
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 200 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLY 373
P Y KL+P P +VDDG++ ES AI+ +LV KY G S P + L L+
Sbjct: 40 PAYTKLSPLGKSPIVVDDGVTYIESAAILEHLVRKY--GPSFKPSEEDVAELEKYELW 95
>SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 359
Score = 29.1 bits (62), Expect = 0.61
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Frame = +2
Query: 347 RALVDQRLYFDIGTLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLD------KFLEG 508
+ L+D + +G+ ++ + + P D + E + L FL+
Sbjct: 109 KPLLDSEIAKFLGSSKRKSKELIEAYEASKTPPDLKEESSTDEEMDSLSAAEEKPNFLQK 168
Query: 509 QKYVAGPNLTVADLSLIASVSSLEASDIDFRNTPTLRDGTRRSRVQLLDTRRP 667
+KY +L +D I+S S + + I PT+ T RS QL D R P
Sbjct: 169 RKYHWETSLDESDAESISSGSLMSITSISEMYGPTVAS-TSRSSTQLSDQRYP 220
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -1
Query: 621 SLNVGV-FLKSMSEASRLETLAMRLRSATVRFGPATYF*PSRNLSSS*RASWTFSFLALS 445
+L +G F M+ +++ T M + RF A+ S +SSS ++WT+ LS
Sbjct: 14 ALGLGAAFALLMAIITKVLTACMGQTQNSERFSTASRSVKSGLISSSTVSAWTWPATLLS 73
Query: 444 AGAPANTWG 418
+GA + T+G
Sbjct: 74 SGAWSYTYG 82
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 448 QGQEREGPGSPSAARQVPRRSEVRGRTEPHRRRPESHRQCL 570
+G+E EGP S +A R R +++G ++ P H+ +
Sbjct: 307 EGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMI 347
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 251 DGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYF 376
+ LSI ESR I + ++ S L+P D K A + RL F
Sbjct: 263 NSLSI-ESRLTIANMTTEWGALSGLFPTDEKLLAWYEDRLKF 303
>SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 406 TESLVQSSDVEIQPLVNKGTSFGVF 332
TE V SS + PL+N G S F
Sbjct: 156 TEKFVASSSMNANPLINSGNSISPF 180
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 494 KFLEGQKYVAGPNLTVADLSLIASVSSLEASDI 592
+F Q+Y+ + DL ++A SLEA DI
Sbjct: 459 EFQSTQRYLVLSEIGETDLDILAEPKSLEACDI 491
>SPAC13D6.03c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 228
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 214 VEPSTHGPDPSRRWSFNLGVPRHHHLLGE 300
+ H P PS R+ F L + HH E
Sbjct: 85 ISDGLHVPHPSNRFDFALSIAVIHHFSNE 113
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 151 KPEPQTGRPTPRGTAQTRIFEVEPSTHGPDPSRRWSFNLGVPRHHHL 291
+P+P TG P PR T+ E E D + + NL P + +L
Sbjct: 380 QPQPNTGSPFPRFTSTNTEDEQESDIPQSDANDS-TVNLNQPNYANL 425
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 475 SPSAARQVPRRSEVRGRTEPHRRRPES 555
+PSAA +VP++ + + +P RR S
Sbjct: 115 TPSAASEVPKKKYKKIKVDPSARRTSS 141
>SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 474
Score = 25.0 bits (52), Expect = 10.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 646 LYS*PSRTIS*RWRISEVNVRGFQAGDTG 560
+Y P RT+ RWR +++ G + +G
Sbjct: 296 IYPDPKRTLQHRWRYPTLSLHGIEGAFSG 324
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 428 FAGAPADKAKNEKVQEALQLLDKF-LEGQKYVA 523
F AP D ++ KV+ LQL D+F E KY A
Sbjct: 118 FIVAPLDLFRDSKVKPLLQLNDRFKAEQAKYDA 150
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,563,578
Number of Sequences: 5004
Number of extensions: 49021
Number of successful extensions: 161
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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