Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o10
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.41 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.41 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -2

Query: 147 LINLIGSSTHLRVK-FSYSGSVFEEIGTYDDNIYLHQKIIVTQKFV 13
           ++ + G S +  +  F Y  +    I TYD   Y+H  +IV   F+
Sbjct: 231 VLTIFGVSFYFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFL 276


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -2

Query: 147 LINLIGSSTHLRVK-FSYSGSVFEEIGTYDDNIYLHQKIIVTQKFV 13
           ++ + G S +  +  F Y  +    I TYD   Y+H  +IV   F+
Sbjct: 227 VLTIFGVSFYFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFL 272


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 514 FFHNFVPCPVCQHTET 467
           F   FV CP C++ ET
Sbjct: 6   FIRKFVLCPECENPET 21


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 231 LFEDCSRTRQPRCGCSILVSPSRFTNRPENNYQE 332
           + E   +   P  G S+L     F N  EN+Y+E
Sbjct: 373 VIEIVDKLLNPDLGLSLLQVAQIFKNLLENHYEE 406


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 204  PHEPKINSALFED 242
            P +PK+N   FED
Sbjct: 1255 PFDPKVNFTYFED 1267


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 204  PHEPKINSALFED 242
            P +PK+N   FED
Sbjct: 1255 PFDPKVNFTYFED 1267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,914
Number of Sequences: 336
Number of extensions: 3394
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)