Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o10
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0085 + 11555539-11555632,11555767-11555867,11556947-115570...    93   1e-19
03_01_0198 - 1578392-1578487,1579060-1579170,1579303-1579396,157...    33   0.26 
01_01_0764 + 5910687-5910961,5912549-5912636,5912750-5912909,591...    30   1.4  
06_03_0126 + 16978566-16979104,16979279-16979365,16979481-169795...    28   7.4  

>06_02_0085 +
           11555539-11555632,11555767-11555867,11556947-11557056,
           11557152-11557227,11557412-11557555,11558432-11558503,
           11558601-11559470
          Length = 488

 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
 Frame = +1

Query: 217 KSIQHYLKTAAEHDNRDVVVAYWCRLHALQTGLXXXXXXXXXXXX-VLMALMDWLEEIKK 393
           K +  YL+ A E    + +VAY+CRL+A++ G+             +L++LM+ LE+ KK
Sbjct: 9   KGLLPYLQRADELQKHEPLVAYYCRLYAMEKGMRIPQKERTKTTNSLLISLMNQLEKDKK 68

Query: 394 SHVDNEAISNDVAAQAHLENYALKLFLYADKQDREQNYGKNVVKAFYTAGMIYDVLTTFG 573
           S       S+D     H+E +AL +F  ADKQDR      N  K FY A + +++L  FG
Sbjct: 69  SLTLG---SDD---HLHVEGFALNVFAKADKQDRAGRADINTAKTFYAASIFFEILNQFG 122

Query: 574 ELTDEAAQNRKYAKWKAAYIHNCLK 648
           EL  +  Q +KYA WKAA I   LK
Sbjct: 123 ELQTDVEQKQKYAIWKAAEIRKALK 147


>03_01_0198 -
           1578392-1578487,1579060-1579170,1579303-1579396,
           1579467-1579591,1580016-1580116,1580589-1580793
          Length = 243

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
 Frame = +1

Query: 205 PMSLKSIQHYLKTAAEHDNRDVVVAYWCRLHALQTG-LXXXXXXXXXXXXVLMALMDWLE 381
           P SL  I   L+ A E +  +  VAY CR +A +                   AL+  LE
Sbjct: 42  PSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLE 101

Query: 382 EIKKSHVDNEAISNDV-AAQAHLENYALKLFLYADKQDREQNYGKNVVKAFYTAGMIYDV 558
              +  +   A  +D    QA  ++Y  K ++ A +   +Q     + KA+ TA ++++V
Sbjct: 102 RENEPTLRGRARKSDAREIQAFYQHY-YKKYIQALQNVSDQVDRAQLTKAYQTANVLFEV 160

Query: 559 L 561
           L
Sbjct: 161 L 161


>01_01_0764 +
           5910687-5910961,5912549-5912636,5912750-5912909,
           5913017-5913237,5913315-5913610,5914176-5914287,
           5914376-5914514,5914850-5915046,5915134-5915223,
           5915611-5915646
          Length = 537

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 505 YGKNVVKAFYTAGMIYDVLTTFGELTDEAAQNRKYAKWKAAYI 633
           +G++ V+ FY+  +   +++T  E     A +RKY K  A Y+
Sbjct: 117 FGEHKVRVFYSVRIFLGLISTITETVLVVALSRKYGKRLACYV 159


>06_03_0126 +
           16978566-16979104,16979279-16979365,16979481-16979537,
           16979648-16979886,16981776-16981894,16982010-16982096,
           16983898-16983971,16984483-16984547,16984581-16984961,
           16985136-16985401
          Length = 637

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 517 VVKAFYTAGMIYDVLTTFGELTDEAAQNRKYAKW 618
           VV  FYT     D+L  FG+  D AA+   YA+W
Sbjct: 40  VVVWFYTG----DILVAFGQDADIAAEAGAYARW 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,447,512
Number of Sequences: 37544
Number of extensions: 298748
Number of successful extensions: 670
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)