Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o10
         (652 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26326| Best HMM Match : DUF605 (HMM E-Value=2.2e-35)               159   1e-39
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)         30   1.4  

>SB_26326| Best HMM Match : DUF605 (HMM E-Value=2.2e-35)
          Length = 229

 Score =  159 bits (387), Expect = 1e-39
 Identities = 76/150 (50%), Positives = 99/150 (66%)
 Frame = +1

Query: 199 DCPMSLKSIQHYLKTAAEHDNRDVVVAYWCRLHALQTGLXXXXXXXXXXXXVLMALMDWL 378
           D P SLK IQ YLK A E++ RD +VAY+C L A+Q G+             L  LMD L
Sbjct: 4   DVPPSLKPIQPYLKVAKEYEKRDRIVAYYCNLFAVQKGIKLDSKSPDGKKF-LFTLMDKL 62

Query: 379 EEIKKSHVDNEAISNDVAAQAHLENYALKLFLYADKQDREQNYGKNVVKAFYTAGMIYDV 558
           E+ KK     +AI++D+  QAH++  A +LFL+AD +DR   + KNV+K+FYTA +IYD 
Sbjct: 63  EKTKKELAGEDAITSDIVGQAHMDEQARQLFLWADTEDRAARFNKNVIKSFYTASLIYDT 122

Query: 559 LTTFGELTDEAAQNRKYAKWKAAYIHNCLK 648
           L  FGELTDEAA  +KY+KWKA YI+ CLK
Sbjct: 123 LAQFGELTDEAAMRQKYSKWKATYINKCLK 152


>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1704

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 166 LIYDLEMANIPDCPMSLKSIQHYLKTAAEHDNRDVVVAYWCRLH 297
           ++ +++ AN+PDCP  + S Q   +      NR++V   + +LH
Sbjct: 698 MLCEIQPANMPDCPTGMWSHQANQRFTELVQNRNLVAKVYSQLH 741


>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
          Length = 2269

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 10/96 (10%)
 Frame = +1

Query: 379 EEIKKSHVDNEAISNDVAAQAHLENYALKLFLYADKQDREQNYGKNVVKAFYTAGMIYDV 558
           E   K   DNE I N V  Q  LE    K F    K+  E+   +N+  A   A  + + 
Sbjct: 74  ENKDKVLTDNEKIGNQVK-QNFLE--CTKYFTEFQKKFEEKESAQNLGMAKVVASAVTES 130

Query: 559 LTTFGELTDEAAQN----------RKYAKWKAAYIH 636
           L+ F    D   +N          R YA WK  ++H
Sbjct: 131 LSKFSSKGDGKLENISPPKWDGRRRSYATWKKEFLH 166


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,419,671
Number of Sequences: 59808
Number of extensions: 360082
Number of successful extensions: 762
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)