Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o10
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81130-6|CAB03419.4|  312|Caenorhabditis elegans Hypothetical pr...   135   3e-32
Z81130-5|CAB03420.1|  361|Caenorhabditis elegans Hypothetical pr...    34   0.10 
U53141-8|AAA96110.3|  572|Caenorhabditis elegans Prion-like-(q/n...    27   8.7  
AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protei...    27   8.7  
AF101318-4|AAC69346.1|  337|Caenorhabditis elegans Seven tm rece...    27   8.7  
AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal chem...    27   8.7  

>Z81130-6|CAB03419.4|  312|Caenorhabditis elegans Hypothetical
           protein T23G11.7b protein.
          Length = 312

 Score =  135 bits (326), Expect = 3e-32
 Identities = 64/149 (42%), Positives = 93/149 (62%)
 Frame = +1

Query: 205 PMSLKSIQHYLKTAAEHDNRDVVVAYWCRLHALQTGLXXXXXXXXXXXXVLMALMDWLEE 384
           P + K I HY+K A E+ +RD V+ YWC  +A+QT +             L  L+  LE 
Sbjct: 6   PPAFKPIAHYIKIANENASRDPVIYYWCLFYAVQTAMKLDKSTVEARQY-LTGLLTTLEA 64

Query: 385 IKKSHVDNEAISNDVAAQAHLENYALKLFLYADKQDREQNYGKNVVKAFYTAGMIYDVLT 564
           IK    DN+AI N+  AQAH+E++A KLF +ADK+++  N  K+VV AFYTAG + D+L+
Sbjct: 65  IKTQLADNDAIKNETIAQAHIESFAEKLFNFADKKEKTGNVDKSVVHAFYTAGHVMDILS 124

Query: 565 TFGELTDEAAQNRKYAKWKAAYIHNCLKN 651
            FGE+ +    ++KYAKWK+  I  CL++
Sbjct: 125 LFGEIDEPFLSSKKYAKWKSTQIFTCLRD 153


>Z81130-5|CAB03420.1|  361|Caenorhabditis elegans Hypothetical
           protein T23G11.7a protein.
          Length = 361

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 205 PMSLKSIQHYLKTAAEHDNRDVVVAYWCRL 294
           P + K I HY+K A E+ +RD V+ YW  L
Sbjct: 6   PPAFKPIAHYIKIANENASRDPVIYYWSLL 35


>U53141-8|AAA96110.3|  572|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 13
           protein.
          Length = 572

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 240 DCSRTRQPRCGCSILVSPSRFTNRPENNY 326
           DC+   Q +CGC  + SPS      +N Y
Sbjct: 110 DCANMLQTQCGCPSISSPSCDCGTLQNQY 138


>AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protein
           protein.
          Length = 917

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -2

Query: 528 CLDHIFSIILFPVLFVSIQKQFQCIVFKMGLGCYIIADCFIV 403
           CL  +   ++F  +F  IQ +FQ     + + C I     IV
Sbjct: 748 CLSSVVGSLVFVAIFAFIQLKFQAFAAVVTIACVIFTSSAIV 789


>AF101318-4|AAC69346.1|  337|Caenorhabditis elegans Seven tm
           receptor protein 68 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/50 (24%), Positives = 29/50 (58%)
 Frame = -2

Query: 510 SIILFPVLFVSIQKQFQCIVFKMGLGCYIIADCFIVYMRFFYFFKPVHKS 361
           S++ F V  +++ ++  C++  +  GC+I+   FI  ++F Y +  + K+
Sbjct: 71  SLLFFSVTTLNLPREVICLMISLWGGCWIVIVSFIA-VQFVYRYLCLFKA 119


>AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal
           chemotaxis protein 14 protein.
          Length = 917

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -2

Query: 528 CLDHIFSIILFPVLFVSIQKQFQCIVFKMGLGCYIIADCFIV 403
           CL  +   ++F  +F  IQ +FQ     + + C I     IV
Sbjct: 748 CLSSVVGSLVFVAIFAFIQLKFQAFAAVVTIACVIFTSSAIV 789


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,135,967
Number of Sequences: 27780
Number of extensions: 291323
Number of successful extensions: 798
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)