Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11o10
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 88 4e-18
At3g59100.1 68416.m06589 glycosyl transferase family 48 protein ... 36 0.018
At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-g... 35 0.054
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 33 0.12
At5g13000.1 68418.m01490 glycosyl transferase family 48 protein ... 31 0.66
At1g06490.1 68414.m00688 glycosyl transferase family 48 protein ... 31 0.66
At2g13680.1 68415.m01508 glycosyl transferase family 48 protein ... 31 0.88
At1g27910.1 68414.m03420 U-box domain-containing protein contain... 28 4.7
At5g58140.4 68418.m07274 protein kinase family protein / non pho... 27 8.2
At5g58140.3 68418.m07277 protein kinase family protein / non pho... 27 8.2
At5g58140.2 68418.m07276 protein kinase family protein / non pho... 27 8.2
At5g58140.1 68418.m07275 protein kinase family protein / non pho... 27 8.2
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 88.2 bits (209), Expect = 4e-18
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 217 KSIQHYLKTAAEHDNRDVVVAYWCRLHALQTGLXXXXXXXXXXXX-VLMALMDWLEEIKK 393
+++ YL+ A E + +VAY+CRL+A++ GL +LM+L++ LE+ KK
Sbjct: 9 RALLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNSILMSLINQLEKDKK 68
Query: 394 SHVDNEAISNDVAAQAHLENYALKLFLYADKQDREQNYGKNVVKAFYTAGMIYDVLTTFG 573
S +S D H+E +AL +F ADKQDR K FY A + +++L+ FG
Sbjct: 69 SLT----LSPD--DNMHVEGFALSVFAKADKQDRAGRADLGTAKTFYAASIFFEILSQFG 122
Query: 574 ELTDEAAQNRKYAKWKAAYIHNCLK 648
+ + Q KYA WKAA I +K
Sbjct: 123 PVPPDIEQKHKYAAWKAADIRKAIK 147
>At3g59100.1 68416.m06589 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1934
Score = 36.3 bits (80), Expect = 0.018
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +1
Query: 205 PMSLKSIQHYLKTAAEHDNRDVVVAYWCRLHALQTGLXXXXXXXXXXXXVLMA-LMDWLE 381
P SL SI L+ A E + + VAY CR HA + L+ LE
Sbjct: 44 PSSLASIAPILRVANEIEKDNPRVAYLCRFHAFEKAHRMDATSSGRGVRQFKTYLLHRLE 103
Query: 382 EIKKSHVDNEAISNDVAAQAHLENYALKLFLYADKQDREQNYGKNVVKAFYTAGMIYDVL 561
+ ++ A ++ QA+ +N+ K K+ + + + + A ++YDVL
Sbjct: 104 KEEEETKPQLAKNDPREIQAYYQNFYEKYI----KEGETSRKPEEMARLYQIASVLYDVL 159
Query: 562 TTFGELTDEAAQNRKYAK 615
T + R+YA+
Sbjct: 160 KTVVPSPKVDYETRRYAE 177
>At1g05570.1 68414.m00575 callose synthase 1 (CALS1) /
1,3-beta-glucan synthase 1 nearly identical to callose
synthase 1 catalytic subunit [Arabidopsis thaliana]
GI:13649388
Length = 1922
Score = 34.7 bits (76), Expect = 0.054
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Frame = +1
Query: 205 PMSLKSIQHYLKTAAEHDNRDVVVAYWCRLHALQTG-LXXXXXXXXXXXXVLMALMDWLE 381
P SL I L+ A E + + VAY CR +A + AL+ LE
Sbjct: 8 PSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLE 67
Query: 382 EIKKSHVDNEAISNDVAAQAHLENYALK----LFLYADKQDREQNYGKNVVKAFYTAGMI 549
++ + S+ Q+ ++Y K L ADK DR Q + KA+ TA ++
Sbjct: 68 RENETTLAGRQKSDAREMQSFYQHYYKKYIQALLNAADKADRAQ-----LTKAYQTAAVL 122
Query: 550 YDVLTTFGELTD 585
++VL + D
Sbjct: 123 FEVLKAVNQTED 134
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 33.5 bits (73), Expect = 0.12
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Frame = +1
Query: 205 PMSLKSIQHYLKTAAEHDNRDVVVAYWCRLHALQTG-LXXXXXXXXXXXXVLMALMDWLE 381
P SL I L+ A E + + VAY CR +A + AL+ LE
Sbjct: 36 PSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLE 95
Query: 382 EIKKSHVDNEAISNDVAAQAHLENYALK----LFLYADKQDREQNYGKNVVKAFYTAGMI 549
++ + S+ Q+ ++Y K L ADK DR Q + KA+ TA ++
Sbjct: 96 RENETTLAGRQKSDAREMQSFYQHYYKKYIQALQNAADKADRAQ-----LTKAYQTAAVL 150
Query: 550 YDVLTTFGELTD 585
++VL + D
Sbjct: 151 FEVLKAVNQTED 162
>At5g13000.1 68418.m01490 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1889
Score = 31.1 bits (67), Expect = 0.66
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 6/125 (4%)
Frame = +1
Query: 205 PMSLKSIQHYLKTAAEHDNRDVVVAYWCRLHALQTG-LXXXXXXXXXXXXVLMALMDWLE 381
P SL I L+ A E ++ + VAY CR +A + AL+ LE
Sbjct: 39 PSSLVEIAPILRVANEVESSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLE 98
Query: 382 EIKKSHVDNEAISNDVAA-----QAHLENYALKLFLYADKQDREQNYGKNVVKAFYTAGM 546
+ +D Q + + Y L ADK DR Q + KA+ TA +
Sbjct: 99 REHDPTLMGRVKKSDAREMQSFYQHYYKKYIQALHNAADKADRAQ-----LTKAYQTANV 153
Query: 547 IYDVL 561
+++VL
Sbjct: 154 LFEVL 158
>At1g06490.1 68414.m00688 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1933
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 205 PMSLKSIQHYLKTAAEHDNRDVVVAYWCRLHALQ 306
P SL SI L+ A + D + VAY CR HA +
Sbjct: 52 PSSLASIAPILRVANDIDQDNARVAYLCRFHAFE 85
>At2g13680.1 68415.m01508 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1923
Score = 30.7 bits (66), Expect = 0.88
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +1
Query: 205 PMSLKSIQHYLKTAAEHDNRDVVVAYWCRLHALQTGLXXXXXXXXXXXXVLMALM-DWLE 381
P SL +I L+ AAE ++ VAY CR +A + L+ LE
Sbjct: 38 PASLGTIAPILRVAAEIEHERPRVAYLCRFYAFEKAHRLDPSSGGRGVRQFKTLLFQRLE 97
Query: 382 EIKKSHVDNEAISNDVAA-----QAHLENYALKLFLYADKQDREQNYGKNVVKAFYTAGM 546
S + + D Q + E+Y ++ D+ DR Q + KA+ TAG+
Sbjct: 98 RDNASSLASRVKKTDGREVESFYQQYYEHY-VRALDQGDQADRAQ-----LGKAYQTAGV 151
Query: 547 IYDVL 561
+++VL
Sbjct: 152 LFEVL 156
>At1g27910.1 68414.m03420 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 768
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 159 ALPFLINLIGSSTHLRVKFSYSGSVFEEIGTYDDNI 52
A+PF++NL+ + T ++ K S+F + TY NI
Sbjct: 550 AVPFMVNLLWTETEVQCKVDALHSLF-HLSTYPPNI 584
>At5g58140.4 68418.m07274 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 689
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +3
Query: 93 HCMKILRASGLMIRLN*LKKEVPSANLRFRNGKHS*LPHEPKINSALFEDCSRTRQPRCG 272
HC + +SG KE+ N RF G P K A DC + + CG
Sbjct: 144 HCPIVYASSGFFTMTGYSSKEIVGRNCRFLQG-----PDTDKNEVAKIRDCVKNGKSYCG 198
>At5g58140.3 68418.m07277 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +3
Query: 93 HCMKILRASGLMIRLN*LKKEVPSANLRFRNGKHS*LPHEPKINSALFEDCSRTRQPRCG 272
HC + +SG KE+ N RF G P K A DC + + CG
Sbjct: 144 HCPIVYASSGFFTMTGYSSKEIVGRNCRFLQG-----PDTDKNEVAKIRDCVKNGKSYCG 198
>At5g58140.2 68418.m07276 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +3
Query: 93 HCMKILRASGLMIRLN*LKKEVPSANLRFRNGKHS*LPHEPKINSALFEDCSRTRQPRCG 272
HC + +SG KE+ N RF G P K A DC + + CG
Sbjct: 144 HCPIVYASSGFFTMTGYSSKEIVGRNCRFLQG-----PDTDKNEVAKIRDCVKNGKSYCG 198
>At5g58140.1 68418.m07275 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +3
Query: 93 HCMKILRASGLMIRLN*LKKEVPSANLRFRNGKHS*LPHEPKINSALFEDCSRTRQPRCG 272
HC + +SG KE+ N RF G P K A DC + + CG
Sbjct: 144 HCPIVYASSGFFTMTGYSSKEIVGRNCRFLQG-----PDTDKNEVAKIRDCVKNGKSYCG 198
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,009,537
Number of Sequences: 28952
Number of extensions: 259391
Number of successful extensions: 655
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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