Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o06
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81493-6|CAB04038.1|  335|Caenorhabditis elegans Hypothetical pr...    31   0.78 
AF000263-13|AAO21393.1|  695|Caenorhabditis elegans Hypothetical...    29   2.4  
AF000263-12|AAO21392.1|  838|Caenorhabditis elegans Hypothetical...    29   2.4  
AF000263-11|AAL77184.1|  866|Caenorhabditis elegans Hypothetical...    29   2.4  
AF000263-8|AAK21461.1|  924|Caenorhabditis elegans Hypothetical ...    29   2.4  
AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>Z81493-6|CAB04038.1|  335|Caenorhabditis elegans Hypothetical
           protein F01D5.7a protein.
          Length = 335

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -1

Query: 651 PIFSHYKFYGNRPDVF*SCIDHTCRSNHPVMRCSAPHPGACP 526
           P+ S  + + N PD   +CID  C  N  V+ C   H    P
Sbjct: 226 PLTSALRMFCNNPDKETTCIDKICHINTRVLICHGDHDQRIP 267


>AF000263-13|AAO21393.1|  695|Caenorhabditis elegans Hypothetical
           protein T08B2.5g protein.
          Length = 695

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 570 DWICK-CGLYNFKRRQVCYR 626
           DWIC  C + NF +RQ C++
Sbjct: 89  DWICAHCSMNNFVKRQTCFK 108


>AF000263-12|AAO21392.1|  838|Caenorhabditis elegans Hypothetical
           protein T08B2.5f protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 570 DWICK-CGLYNFKRRQVCYR 626
           DWIC  C + NF +RQ C++
Sbjct: 232 DWICAHCSMNNFVKRQTCFK 251


>AF000263-11|AAL77184.1|  866|Caenorhabditis elegans Hypothetical
           protein T08B2.5c protein.
          Length = 866

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 570 DWICK-CGLYNFKRRQVCYR 626
           DWIC  C + NF +RQ C++
Sbjct: 260 DWICAHCSMNNFVKRQTCFK 279


>AF000263-8|AAK21461.1|  924|Caenorhabditis elegans Hypothetical
           protein T08B2.5a protein.
          Length = 924

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 570 DWICK-CGLYNFKRRQVCYR 626
           DWIC  C + NF +RQ C++
Sbjct: 318 DWICAHCSMNNFVKRQTCFK 337


>AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical
           protein T08B2.5b protein.
          Length = 925

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 570 DWICK-CGLYNFKRRQVCYR 626
           DWIC  C + NF +RQ C++
Sbjct: 319 DWICAHCSMNNFVKRQTCFK 338


>Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical
           protein F33H1.3 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
 Frame = -1

Query: 678 PHHLHKLHPPIFSHYK---FYGNRPDVF*SCIDHTCRSNHP 565
           PHH H  HP   SHY    F  +  +   S      RSN P
Sbjct: 246 PHHHHHHHPHASSHYNPMGFQNHHEEAVISSAPQINRSNEP 286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,963,191
Number of Sequences: 27780
Number of extensions: 236118
Number of successful extensions: 676
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)