Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11o04
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   5.7  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   7.5  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   9.9  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   9.9  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 37  STVPFPPSYDRTPLP 81
           S  PF P  DRTP P
Sbjct: 791 SNAPFTPPTDRTPTP 805


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 496 RWSILKIIKFTLGTLLRSAVGKPLLCRP 413
           RW I+ I  ++    +R AVG+ LL RP
Sbjct: 191 RWRIISIYSYSNHVYIRFAVGE-LLQRP 217


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 1   GRSAPFAP*NVGSTVPFPPSY 63
           G   P +P + G+  P PP+Y
Sbjct: 457 GIGGPISPLDPGNVTPTPPAY 477


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 480 LRIDHLQWVKINEVY 524
           L +DH +W K NE Y
Sbjct: 314 LLLDHFKWEKENEYY 328


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,296
Number of Sequences: 2352
Number of extensions: 15134
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)