BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11o01 (639 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY051703-1|AAK93127.1| 563|Drosophila melanogaster LD24540p pro... 123 2e-28 AF260235-1|AAF67203.1| 563|Drosophila melanogaster LIGATIN prot... 123 2e-28 AF186594-2|AAG16724.1| 563|Drosophila melanogaster ligatin prot... 123 2e-28 AE014297-4342|AAN14162.1| 563|Drosophila melanogaster CG31426-P... 123 2e-28 AE014297-1284|AAF54627.1| 705|Drosophila melanogaster CG6715-PA... 36 0.061 X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein ( Dros... 31 1.3 U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus interr... 31 1.3 AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA pr... 31 1.3 U81788-1|AAB50404.1| 1921|Drosophila melanogaster kinesin-73 pro... 31 1.7 AE013599-2071|AAF58129.1| 1921|Drosophila melanogaster CG8183-PB... 31 1.7 AE013599-2070|AAM70975.1| 1921|Drosophila melanogaster CG8183-PA... 31 1.7 X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr... 30 2.3 AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P... 30 2.3 AY121656-1|AAM51983.1| 206|Drosophila melanogaster RE04513p pro... 29 4.0 AE014297-497|AAF54096.1| 191|Drosophila melanogaster CG2342-PA ... 29 4.0 AE013599-1233|AAF58698.1| 237|Drosophila melanogaster CG13226-P... 29 4.0 AE001572-19|AAD19809.1| 191|Drosophila melanogaster cuticle pro... 29 4.0 AY058569-1|AAL13798.1| 1472|Drosophila melanogaster LD25641p pro... 29 5.3 AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA... 29 5.3 >AY051703-1|AAK93127.1| 563|Drosophila melanogaster LD24540p protein. Length = 563 Score = 123 bits (296), Expect = 2e-28 Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 3/180 (1%) Frame = +3 Query: 84 MFAKPYKLKSNNTLKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDI 263 MF KPY+ KS+ LK S+ K+ QR+ FP ++ V QLVPAK+ +K++ G Sbjct: 1 MFLKPYRPKSSAALKGSDSKKFRQRVEAAFPHVS---VDQLVPAKAAVTQVKILTHGGVQ 57 Query: 264 VNVYVIDGVPIIMEVAEG-LVPTVCALWQAPEMVPHIIIHTPVFPKVQGGAPLYLPG-VE 437 VY +D +P+ E+ G LVPT+ LW P+++P+ H V PK+ GA L LPG V Sbjct: 58 SMVYCVDKLPLFFELDGGQLVPTLYTLWIVPDILPYFTTHEGVLPKLTNGADLMLPGVVP 117 Query: 438 LPAGGTGFPQFCKGELIAAHTSNNSATVIVGRAILSSGDMLLRTA-GVCMETLHVFGDHL 614 L G + + F KG+L+A + +NN + V VG+ SS ++ + GV ++ LH+FGD L Sbjct: 118 LGVGLSMYGHFKKGQLMAVNLTNNKSAVGVGQLARSSDELYMCGGHGVAIKMLHLFGDKL 177 >AF260235-1|AAF67203.1| 563|Drosophila melanogaster LIGATIN protein. Length = 563 Score = 123 bits (296), Expect = 2e-28 Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 3/180 (1%) Frame = +3 Query: 84 MFAKPYKLKSNNTLKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDI 263 MF KPY+ KS+ LK S+ K+ QR+ FP ++ V QLVPAK+ +K++ G Sbjct: 1 MFLKPYRPKSSAALKGSDSKKFRQRVEAAFPHVS---VDQLVPAKAAVTQVKILTHGGVQ 57 Query: 264 VNVYVIDGVPIIMEVAEG-LVPTVCALWQAPEMVPHIIIHTPVFPKVQGGAPLYLPG-VE 437 VY +D +P+ E+ G LVPT+ LW P+++P+ H V PK+ GA L LPG V Sbjct: 58 SMVYCVDKLPLFFELDGGQLVPTLYTLWIVPDILPYFTTHEGVLPKLTNGADLMLPGVVP 117 Query: 438 LPAGGTGFPQFCKGELIAAHTSNNSATVIVGRAILSSGDMLLRTA-GVCMETLHVFGDHL 614 L G + + F KG+L+A + +NN + V VG+ SS ++ + GV ++ LH+FGD L Sbjct: 118 LGVGLSMYGHFKKGQLMAVNLTNNKSAVGVGQLARSSDELYMCGGHGVAIKMLHLFGDKL 177 >AF186594-2|AAG16724.1| 563|Drosophila melanogaster ligatin protein. Length = 563 Score = 123 bits (296), Expect = 2e-28 Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 3/180 (1%) Frame = +3 Query: 84 MFAKPYKLKSNNTLKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDI 263 MF KPY+ KS+ LK S+ K+ QR+ FP ++ V QLVPAK+ +K++ G Sbjct: 1 MFLKPYRPKSSAALKGSDSKKFRQRVEAAFPHVS---VDQLVPAKAAVTQVKILTHGGVQ 57 Query: 264 VNVYVIDGVPIIMEVAEG-LVPTVCALWQAPEMVPHIIIHTPVFPKVQGGAPLYLPG-VE 437 VY +D +P+ E+ G LVPT+ LW P+++P+ H V PK+ GA L LPG V Sbjct: 58 SMVYCVDKLPLFFELDGGQLVPTLYTLWIVPDILPYFTTHEGVLPKLTNGADLMLPGVVP 117 Query: 438 LPAGGTGFPQFCKGELIAAHTSNNSATVIVGRAILSSGDMLLRTA-GVCMETLHVFGDHL 614 L G + + F KG+L+A + +NN + V VG+ SS ++ + GV ++ LH+FGD L Sbjct: 118 LGVGLSMYGHFKKGQLMAVNLTNNKSAVGVGQLARSSDELYMCGGHGVAIKMLHLFGDKL 177 >AE014297-4342|AAN14162.1| 563|Drosophila melanogaster CG31426-PA protein. Length = 563 Score = 123 bits (296), Expect = 2e-28 Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 3/180 (1%) Frame = +3 Query: 84 MFAKPYKLKSNNTLKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDI 263 MF KPY+ KS+ LK S+ K+ QR+ FP ++ V QLVPAK+ +K++ G Sbjct: 1 MFLKPYRPKSSAALKGSDSKKFRQRVEAAFPHVS---VDQLVPAKAAVTQVKILTHGGVQ 57 Query: 264 VNVYVIDGVPIIMEVAEG-LVPTVCALWQAPEMVPHIIIHTPVFPKVQGGAPLYLPG-VE 437 VY +D +P+ E+ G LVPT+ LW P+++P+ H V PK+ GA L LPG V Sbjct: 58 SMVYCVDKLPLFFELDGGQLVPTLYTLWIVPDILPYFTTHEGVLPKLTNGADLMLPGVVP 117 Query: 438 LPAGGTGFPQFCKGELIAAHTSNNSATVIVGRAILSSGDMLLRTA-GVCMETLHVFGDHL 614 L G + + F KG+L+A + +NN + V VG+ SS ++ + GV ++ LH+FGD L Sbjct: 118 LGVGLSMYGHFKKGQLMAVNLTNNKSAVGVGQLARSSDELYMCGGHGVAIKMLHLFGDKL 177 >AE014297-1284|AAF54627.1| 705|Drosophila melanogaster CG6715-PA protein. Length = 705 Score = 35.5 bits (78), Expect = 0.061 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = -3 Query: 592 SVSMHTPAVLSSMSPLERIARPTITVAELLLVCAAINSPLQN---CGKPVPPAGSSTPGR 422 +V + TPAV SPL I PT+T+A + L N P+ + G+P+ P ++ P Sbjct: 426 TVDLTTPAV---SSPLPNITTPTVTIAHVTLALDK-NPPIHSSSASGRPIAPRLANAPNT 481 Query: 421 YRGAPP 404 PP Sbjct: 482 PTSTPP 487 >X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein ( Drosophila ciD (cubitusinterruptus Dominant) locus mRNA. ). Length = 1377 Score = 31.1 bits (67), Expect = 1.3 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -2 Query: 302 HYNWHPVYHVHIYNVSRGQHQFHANAYRFGGY 207 H + H HVH NV+ H FH AYR GY Sbjct: 88 HQHNHQPQHVHNINVTGQPHDFHP-AYRIPGY 118 >U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus interruptus dominant proteinprotein. Length = 1397 Score = 31.1 bits (67), Expect = 1.3 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -2 Query: 302 HYNWHPVYHVHIYNVSRGQHQFHANAYRFGGY 207 H + H HVH NV+ H FH AYR GY Sbjct: 88 HQHNHQPQHVHNINVTGQPHDFHP-AYRIPGY 118 >AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA protein. Length = 1397 Score = 31.1 bits (67), Expect = 1.3 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -2 Query: 302 HYNWHPVYHVHIYNVSRGQHQFHANAYRFGGY 207 H + H HVH NV+ H FH AYR GY Sbjct: 88 HQHNHQPQHVHNINVTGQPHDFHP-AYRIPGY 118 >U81788-1|AAB50404.1| 1921|Drosophila melanogaster kinesin-73 protein. Length = 1921 Score = 30.7 bits (66), Expect = 1.7 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = +3 Query: 126 KNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGI 230 KN ++++ ++H++ ++TEE+ LVPA GI Sbjct: 1108 KNEQERERELSLVHQWVSLTEERNAVLVPAPGSGI 1142 >AE013599-2071|AAF58129.1| 1921|Drosophila melanogaster CG8183-PB, isoform B protein. Length = 1921 Score = 30.7 bits (66), Expect = 1.7 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = +3 Query: 126 KNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGI 230 KN ++++ ++H++ ++TEE+ LVPA GI Sbjct: 1108 KNEQERERELSLVHQWVSLTEERNAVLVPAPGSGI 1142 >AE013599-2070|AAM70975.1| 1921|Drosophila melanogaster CG8183-PA, isoform A protein. Length = 1921 Score = 30.7 bits (66), Expect = 1.7 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = +3 Query: 126 KNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGI 230 KN ++++ ++H++ ++TEE+ LVPA GI Sbjct: 1108 KNEQERERELSLVHQWVSLTEERNAVLVPAPGSGI 1142 >X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein protein. Length = 2175 Score = 30.3 bits (65), Expect = 2.3 Identities = 14/27 (51%), Positives = 14/27 (51%) Frame = -3 Query: 463 GKPVPPAGSSTPGRYRGAPPWTFGKTG 383 G P PPA S PG GAPP TG Sbjct: 1233 GTPAPPAPPSGPGTGAGAPPTAAPPTG 1259 >AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA, isoform A protein. Length = 2175 Score = 30.3 bits (65), Expect = 2.3 Identities = 14/27 (51%), Positives = 14/27 (51%) Frame = -3 Query: 463 GKPVPPAGSSTPGRYRGAPPWTFGKTG 383 G P PPA S PG GAPP TG Sbjct: 1233 GTPAPPAPPSGPGTGAGAPPTAAPPTG 1259 >AY121656-1|AAM51983.1| 206|Drosophila melanogaster RE04513p protein. Length = 206 Score = 29.5 bits (63), Expect = 4.0 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = -3 Query: 628 FISLLK*SPNT*SVSMHTPAVLSSMSPLER--IARPTITVAELLLVCAAINSPLQNCGKP 455 F ++++ P +V+ AV+++ +P+ R +A P + A L AA +PL P Sbjct: 109 FNAVVRREPLVAAVAAAPAAVVAAPAPVVRAAVAAPVVRAAPLTTTYAAAPAPLAYAAAP 168 Query: 454 VPPAGSSTPGRYRGAP 407 P A ++ + AP Sbjct: 169 APLAYAAPAPVVKAAP 184 >AE014297-497|AAF54096.1| 191|Drosophila melanogaster CG2342-PA protein. Length = 191 Score = 29.5 bits (63), Expect = 4.0 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = -3 Query: 628 FISLLK*SPNT*SVSMHTPAVLSSMSPLER--IARPTITVAELLLVCAAINSPLQNCGKP 455 F ++++ P +V+ AV+++ +P+ R +A P + A L AA +PL P Sbjct: 94 FNAVVRREPLVAAVAAAPAAVVAAPAPVVRAAVAAPVVRAAPLTTTYAAAPAPLAYAAAP 153 Query: 454 VPPAGSSTPGRYRGAP 407 P A ++ + AP Sbjct: 154 APLAYAAPAPVVKAAP 169 >AE013599-1233|AAF58698.1| 237|Drosophila melanogaster CG13226-PA protein. Length = 237 Score = 29.5 bits (63), Expect = 4.0 Identities = 13/49 (26%), Positives = 25/49 (51%) Frame = -2 Query: 350 SLPERAHRRDQPFCYFHYNWHPVYHVHIYNVSRGQHQFHANAYRFGGYQ 204 S P +R + + Y +Y ++ Y ++ GQ+ + + Y +GGYQ Sbjct: 82 SYPSYGYRPNYGYGYPNYGYN--YGYPVFGYGYGQNYYRPSYYNYGGYQ 128 >AE001572-19|AAD19809.1| 191|Drosophila melanogaster cuticle protein protein. Length = 191 Score = 29.5 bits (63), Expect = 4.0 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = -3 Query: 628 FISLLK*SPNT*SVSMHTPAVLSSMSPLER--IARPTITVAELLLVCAAINSPLQNCGKP 455 F ++++ P +V+ AV+++ +P+ R +A P + A L AA +PL P Sbjct: 94 FNAVVRREPLVAAVAAAPAAVVAAPAPVVRAAVAAPVVRAAPLTTTYAAAPAPLAYAAAP 153 Query: 454 VPPAGSSTPGRYRGAP 407 P A ++ + AP Sbjct: 154 APLAYAAPAPVVKAAP 169 >AY058569-1|AAL13798.1| 1472|Drosophila melanogaster LD25641p protein. Length = 1472 Score = 29.1 bits (62), Expect = 5.3 Identities = 20/69 (28%), Positives = 27/69 (39%) Frame = -3 Query: 490 AINSPLQNCGKPVPPAGSSTPGRYRGAPPWTFGKTGVCIMICGTISGACQSAHTVGTNPS 311 A+ LQ PVPP S++ G+ P + GT +C S G NP Sbjct: 579 ALTDALQPPSTPVPPTVSAS-----GSTPTAVTPVITAMPTAGTAGLSCPSTPPTGANPV 633 Query: 310 ATSIIIGTP 284 S + TP Sbjct: 634 LASPKLSTP 642 >AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA protein. Length = 1868 Score = 29.1 bits (62), Expect = 5.3 Identities = 20/69 (28%), Positives = 27/69 (39%) Frame = -3 Query: 490 AINSPLQNCGKPVPPAGSSTPGRYRGAPPWTFGKTGVCIMICGTISGACQSAHTVGTNPS 311 A+ LQ PVPP S++ G+ P + GT +C S G NP Sbjct: 975 ALTDALQPPSTPVPPTVSAS-----GSTPTAVTPVITAMPTAGTAGLSCPSTPPTGANPV 1029 Query: 310 ATSIIIGTP 284 S + TP Sbjct: 1030 LASPKLSTP 1038 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 30,339,798 Number of Sequences: 53049 Number of extensions: 709121 Number of successful extensions: 2823 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2657 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2798 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2682985500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -