Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11n18
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VSY4 Cluster: CG3967-PA, isoform A; n=5; Diptera|Rep:...    42   0.011
UniRef50_Q0RSD4 Cluster: Putative uncharacterized protein; n=1; ...    36   1.2  
UniRef50_Q7PNM6 Cluster: ENSANGP00000017438; n=1; Anopheles gamb...    35   2.2  
UniRef50_Q16Y32 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  

>UniRef50_Q9VSY4 Cluster: CG3967-PA, isoform A; n=5; Diptera|Rep:
           CG3967-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 461

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +1

Query: 271 AGSSTSRRDSQLTDRGYFDVKFYHNKLW 354
           A S+ S     LTD+GY+D+KFYHNKLW
Sbjct: 434 AMSTVSSGGGGLTDQGYYDLKFYHNKLW 461


>UniRef50_Q0RSD4 Cluster: Putative uncharacterized protein; n=1;
           Frankia alni ACN14a|Rep: Putative uncharacterized
           protein - Frankia alni (strain ACN14a)
          Length = 1746

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
 Frame = +1

Query: 28  RVACGTLTYDEYLIRNELDKLTFAPPARSPAPGTXXXXXXXXXXXXXXXXXXXAGVGPVP 207
           R AC   T D  L R+ + +L  APP R PAP                     A   P P
Sbjct: 593 RDACDRATADLRLARDVVARLRSAPP-RPPAPSPAPAPSPPPAPAPPPAPAASAPSAPSP 651

Query: 208 ---TRPSQLEMEEACAALFDEPSPAGS 279
                PS + +E++  +L + PSPAGS
Sbjct: 652 PLGPAPSSISLEDS-PSLVESPSPAGS 677


>UniRef50_Q7PNM6 Cluster: ENSANGP00000017438; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000017438 - Anopheles gambiae
           str. PEST
          Length = 445

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +1

Query: 280 STSRRDSQLTDRGYFDVKFYHNKLW 354
           S     SQ    G+FD+KFYHNKLW
Sbjct: 421 SVHSNGSQQGGGGHFDLKFYHNKLW 445


>UniRef50_Q16Y32 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 254

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +1

Query: 316 GYFDVKFYHNKLW 354
           G+FD+KFYHNKLW
Sbjct: 242 GHFDLKFYHNKLW 254


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,338,432
Number of Sequences: 1657284
Number of extensions: 7998646
Number of successful extensions: 17401
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17397
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)