Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11n15
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74472-2|CAA98945.1|  188|Caenorhabditis elegans Hypothetical pr...   103   1e-22
Z81522-3|CAB04234.2|  167|Caenorhabditis elegans Hypothetical pr...    37   0.017
U39999-3|AAR85904.2|  114|Caenorhabditis elegans Insulin related...    33   0.21 
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr...    32   0.48 
AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U28731-5|AAA68299.1|  125|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AC006608-10|AAF39754.1|  801|Caenorhabditis elegans Hypothetical...    29   3.4  
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z74472-2|CAA98945.1|  188|Caenorhabditis elegans Hypothetical
           protein F23H12.2 protein.
          Length = 188

 Score =  103 bits (248), Expect = 1e-22
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
 Frame = +3

Query: 102 MMEITRTTLGIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERR---LNAQQNASRSRT 272
           ++   ++ + +A GIAG  FLGYC+YFD +R   P +K K+R++R     A   A R   
Sbjct: 5   ILGFNKSNVVLAAGIAGAAFLGYCIYFDHKRINAPDYKDKIRQKRRAQAGAGGMAPRRPA 64

Query: 273 LGG--PVPDMNDHEAMQRFFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVL 446
             G    PD+ D   MQRFFLQ++Q                H+  AV +CG+++QLLS+ 
Sbjct: 65  AAGNDAAPDVTDPSQMQRFFLQEVQLGEELMAAGNVDEGAVHIANAVMLCGESQQLLSIF 124

Query: 447 QQTMPAPIFHLLLKKLPEVSERLRSSMKARSNVMQEE 557
           QQT+    F  ++++LP   ERL     A+++  + E
Sbjct: 125 QQTLSEDQFRAVVQQLPSTRERLAEMFGAKADEAENE 161


>Z81522-3|CAB04234.2|  167|Caenorhabditis elegans Hypothetical
           protein F32B4.2 protein.
          Length = 167

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 8/142 (5%)
 Frame = +3

Query: 129 GIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGGP-------V 287
           G+ VG A  L +    Y+ Q+++          E       ++S  R  GG        +
Sbjct: 13  GVVVGGAALLAIAAYYYWSQKKKSSDTSSATSSESNDVVMMSSSEPRADGGADSKAKFNI 72

Query: 288 PDMNDHEAMQRFFLQQIQXXXXXXXXXXXXXX-VEHLGQAVAVCGQTEQLLSVLQQTMPA 464
            D N     ++ F++Q+                  H+  A+ + G+T QLL VL+ ++  
Sbjct: 73  EDENVRRVCEKLFMEQMDLGEAYLEDEETEELGAIHMANAIVLTGETAQLLKVLRGSISP 132

Query: 465 PIFHLLLKKLPEVSERLRSSMK 530
             F  + K LP    R+   ++
Sbjct: 133 AHFANIQKYLPSADLRVHQLLQ 154


>U39999-3|AAR85904.2|  114|Caenorhabditis elegans Insulin related
           protein 15 protein.
          Length = 114

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +2

Query: 101 NDGNHKNNVRYSCRNCGNTVLGLLCIL*PAKAQGSAVQKEVERAKTECTTKCFEVSYPRW 280
           ND   ++N  +S R+CG ++   +  L      G A+Q E+ RA   C+T C +     W
Sbjct: 23  NDFQPRDNKHHSYRSCGESLSRRVAFL----CNGGAIQTEILRALDCCSTGCTDKQIFSW 78


>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical protein
            T16G12.1 protein.
          Length = 1890

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
 Frame = -1

Query: 719  WKIQNHEAIRSASFNIIYE*VCLQKTDKNKTKINHY--GHH--VLLSSLQIHNFLFDIFF 552
            W +QN   +++   N++    C+Q  D  KT +     G +   LL+S+ +H+   D+ +
Sbjct: 1740 WFVQNAGYLQTDGSNLLNALGCVQNLDLQKTMLRSILSGDYPPSLLNSIAVHDDSSDVLY 1799

Query: 551  LHYVAPRLHRGSEAF*NFWQFLKKQMEDWSWHSLLKYTKQLFSLSTNSHSL 399
             +++         A  +F  ++K   ++WS  + L+  K  F  S+N + L
Sbjct: 1800 -NFLLDNTQDILNAPFDFSLYVKAMFQNWSTSNQLELAKD-FQNSSNYNLL 1848


>AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.3 protein.
          Length = 745

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +3

Query: 159 FLGYCVYFDQQRRKDPLFKKKLRERRLN--AQQNASRSRTLGGPVPDMNDHEA 311
           F  YC +  QQ R + + ++K  ERRL   ++ +AS++R  GG  P     E+
Sbjct: 205 FGAYCYWKVQQWRDEKMAREKAWERRLARVSEVSASKNRNAGGVDPAKRPRES 257


>Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical
           protein C14C10.4 protein.
          Length = 1058

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 470 LPSAS*ETARSFRTPPILDEGEEQRNAGRR 559
           L SA+ +T ++  TPP L + +EQ N GR+
Sbjct: 18  LSSAAAQTTKNTATPPPLKQQQEQSNDGRK 47


>U28731-5|AAA68299.1|  125|Caenorhabditis elegans Hypothetical
           protein F12A10.6 protein.
          Length = 125

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = -2

Query: 268 RDLEAFCCAFSLRSLNFFLNSGSLRLCWS----KYTQ*PKNSVPAI 143
           RD E    A  +       NSG+L +CW     ++   P+NS+PAI
Sbjct: 51  RDKEKVRQAVEMVGAAKIFNSGNLPICWKFQFRQFADLPENSIPAI 96


>AC006608-10|AAF39754.1|  801|Caenorhabditis elegans Hypothetical
           protein C15F1.2 protein.
          Length = 801

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -1

Query: 404 SLPEMFDSSFKITCSQQLFAELNLLQEKSLH 312
           SL  + ++SF+ + S++ F + NL+QEK  H
Sbjct: 683 SLRRLLNTSFEYSKSRECFHDANLIQEKCTH 713


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
           protein F12F6.6 protein.
          Length = 1126

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +2

Query: 506 RTPPILDEGEEQRNAGRRCRIKNCEFEEMKVKHGGHND*F*FCFYQSSVD 655
           + PP++D G +     +RC+   C F  M+ + GG +    FC  ++SV+
Sbjct: 442 KEPPVVDLGPQGPIRCQRCKAYICPF--MEFQDGGRSFRCPFCHARTSVE 489


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,448,471
Number of Sequences: 27780
Number of extensions: 335053
Number of successful extensions: 1161
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)