Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11n07
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 339 8e-94
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 334 2e-92
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 142 3e-34
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 137 7e-33
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 137 7e-33
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 137 7e-33
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 134 7e-32
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 95 4e-20
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 94 9e-20
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 93 2e-19
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 93 2e-19
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 92 4e-19
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 83 2e-16
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 82 4e-16
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 79 2e-15
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 78 6e-15
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 76 2e-14
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 75 4e-14
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 73 2e-13
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 73 2e-13
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 71 7e-13
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 70 1e-12
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 69 2e-12
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 69 3e-12
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 68 5e-12
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 67 1e-11
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 66 2e-11
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 66 2e-11
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 66 3e-11
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 66 3e-11
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 64 6e-11
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 64 1e-10
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 64 1e-10
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 63 1e-10
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 63 1e-10
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 63 1e-10
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 63 1e-10
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 63 1e-10
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 63 1e-10
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 62 2e-10
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 62 2e-10
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 62 3e-10
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 62 4e-10
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 62 4e-10
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 62 4e-10
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 62 4e-10
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 60 1e-09
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 60 2e-09
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 59 2e-09
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 59 2e-09
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 58 4e-09
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 58 4e-09
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 58 5e-09
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 58 5e-09
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 58 7e-09
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 56 3e-08
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 55 4e-08
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 55 4e-08
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 55 5e-08
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 55 5e-08
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 54 7e-08
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 54 9e-08
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 54 9e-08
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 54 1e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 54 1e-07
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 53 2e-07
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 53 2e-07
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 53 2e-07
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 53 2e-07
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 52 3e-07
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 52 3e-07
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 52 5e-07
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 52 5e-07
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 51 6e-07
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 51 6e-07
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 51 6e-07
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 51 8e-07
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 51 8e-07
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 51 8e-07
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 50 1e-06
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 50 1e-06
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 50 1e-06
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 50 2e-06
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 50 2e-06
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 49 2e-06
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 49 3e-06
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 49 3e-06
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 49 3e-06
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 48 4e-06
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 48 4e-06
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 48 8e-06
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 48 8e-06
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 47 1e-05
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 47 1e-05
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 47 1e-05
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 47 1e-05
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 47 1e-05
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 46 2e-05
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 46 2e-05
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 46 3e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 46 3e-05
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 45 4e-05
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 45 5e-05
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 45 5e-05
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 44 7e-05
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 44 9e-05
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 43 2e-04
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 43 2e-04
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 43 2e-04
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 42 3e-04
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 42 3e-04
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 42 3e-04
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 42 3e-04
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 42 4e-04
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 42 5e-04
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 42 5e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 41 7e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 41 9e-04
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 41 9e-04
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 41 9e-04
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 40 0.001
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 40 0.001
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 40 0.001
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 40 0.001
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 40 0.001
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 40 0.001
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 40 0.002
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 40 0.002
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 40 0.002
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 40 0.002
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 39 0.003
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 39 0.003
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 39 0.003
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 39 0.003
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 39 0.003
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 39 0.003
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 39 0.003
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 39 0.003
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 39 0.003
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 39 0.003
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 39 0.003
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 38 0.005
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 38 0.005
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 38 0.005
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 38 0.005
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 38 0.005
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 38 0.005
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 38 0.006
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 38 0.006
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 38 0.008
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 38 0.008
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 38 0.008
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 37 0.011
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 37 0.011
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 37 0.011
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 37 0.011
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 37 0.011
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 37 0.014
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 37 0.014
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 37 0.014
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 37 0.014
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 37 0.014
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 36 0.019
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 36 0.025
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 36 0.025
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 36 0.033
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 35 0.043
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 35 0.043
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 35 0.043
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 35 0.057
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 35 0.057
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 35 0.057
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 34 0.075
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 34 0.075
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 34 0.075
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 34 0.099
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 33 0.13
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 33 0.13
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 33 0.13
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 33 0.13
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 33 0.17
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 33 0.23
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 33 0.23
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 31 0.53
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 31 0.53
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 31 0.70
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 31 0.70
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 30 1.2
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 30 1.2
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 30 1.6
At4g30530.1 68417.m04334 defense-related protein, putative stron... 30 1.6
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 30 1.6
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 1.6
At2g23970.1 68415.m02862 defense-related protein, putative simil... 30 1.6
At2g23960.1 68415.m02861 defense-related protein, putative simil... 29 2.1
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 29 2.1
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 29 2.1
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 29 2.8
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 29 2.8
At2g39490.1 68415.m04846 F-box family protein ; similar to SKP1... 29 2.8
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 29 2.8
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 3.7
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 29 3.7
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 29 3.7
At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK... 28 4.9
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 28 4.9
At2g28320.1 68415.m03442 pleckstrin homology (PH) domain-contain... 28 4.9
At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,... 28 6.5
At4g30550.1 68417.m04336 glutamine amidotransferase class-I doma... 28 6.5
At2g17265.1 68415.m01994 homoserine kinase (HSK) identical to ho... 28 6.5
At4g30540.1 68417.m04335 glutamine amidotransferase class-I doma... 27 8.6
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 27 8.6
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 27 8.6
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 27 8.6
At2g42470.1 68415.m05254 meprin and TRAF homology domain-contain... 27 8.6
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 27 8.6
At1g67570.1 68414.m07698 expressed protein 27 8.6
At1g09880.1 68414.m01112 hypothetical protein 27 8.6
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 339 bits (834), Expect = 8e-94
Identities = 152/200 (76%), Positives = 169/200 (84%)
Frame = +1
Query: 76 MLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH 255
ML KFETKS RVKG+SFH KRPW+LASLH+GVIQLWDYRM TL+++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 256 IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
QPLFVSGGDDYKIKVWNYK RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 436 NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLT 615
NWQSR C+SVLTGHNHYVMCA FHP EDL+VSASLDQ+VRVWD LRKK+V+P +
Sbjct: 121 NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMR 180
Query: 616 EHLRNPQATDLFGQADAVVK 675
N +DLFG DA+VK
Sbjct: 181 LTQMN---SDLFGGVDAIVK 197
Score = 64.5 bits (150), Expect = 6e-11
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRC--LFTLLGHLDYIRTTFFHHEYPW 396
HD V FH PL VSG DD ++K+W + + + TL GH++ + + FH +
Sbjct: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVS 531
I+S S+D++IR+W+ R + + HP +LL +
Sbjct: 263 IVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAA 307
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Frame = +1
Query: 121 SFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKI 300
SFH K V+++ + +++WD L K + P I Q + GG D +
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGA---LRK--KTVSPADDIMRLTQMNSDLFGGVDAIV 196
Query: 301 KVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC--ISVLTG 474
K + L GH + FH P I+S +DD+ +++W + + L G
Sbjct: 197 K----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
H + V FH +D++VS S D+S+RVWD
Sbjct: 247 HMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLE--KFDEHDGPVRGICFHIQQPLFVSG 282
V +FH P +++ + ++LW E H V + FH +Q + VS
Sbjct: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSN 266
Query: 283 GDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCIS 462
+D I+VW+ +R L T D H E +L+A D + ++ + +
Sbjct: 267 SEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMN-LLAAGHDSGMIVFKLERERPAF 325
Query: 463 VLTG 474
L+G
Sbjct: 326 ALSG 329
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 334 bits (822), Expect = 2e-92
Identities = 151/200 (75%), Positives = 167/200 (83%)
Frame = +1
Query: 76 MLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH 255
ML KFETKS RVKG+SFH KRPW+LASLH+GVIQLWDYRM TL+++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 256 IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
QPLFVSGGDDYKIKVWNYK RCLFTLLGHLDYIRT FHHE PWI+SASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 120
Query: 436 NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLT 615
NWQSR CISVLTGHNHYVMCA FHP EDL+VSASLDQ+VRVWD L+KKS +P +
Sbjct: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMR 180
Query: 616 EHLRNPQATDLFGQADAVVK 675
N +DLFG DA+VK
Sbjct: 181 FSQMN---SDLFGGVDAIVK 197
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRC--LFTLLGHLDYIRTTFFHHEYPW 396
HD V FH PL VSG DD ++K+W + + + TL GH++ + + FH +
Sbjct: 203 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVS 531
I+S S+D++IR+W+ R I + HP +LL +
Sbjct: 263 IVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAA 307
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Frame = +1
Query: 121 SFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKI 300
SFH K V+++ + +++WD L+K + P + Q + GG D +
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGA---LKK--KSASPADDLMRFSQMNSDLFGGVDAIV 196
Query: 301 KVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC--ISVLTG 474
K + L GH + FH P I+S +DD+ +++W + + L G
Sbjct: 197 K----------YVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
H + V FH +D++VS S D+S+RVWD
Sbjct: 247 HMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLE--KFDEHDGPVRGICFHIQQPLFVSG 282
V SFH P +++ + ++LW E H V + FH +Q + VS
Sbjct: 207 VNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSN 266
Query: 283 GDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCIS 462
+D I+VW+ +R + T D H E +L+A D + ++ + +
Sbjct: 267 SEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEIN-LLAAGHDNGMIVFKLERERPAF 325
Query: 463 VLTG 474
L+G
Sbjct: 326 ALSG 329
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 142 bits (343), Expect = 3e-34
Identities = 69/201 (34%), Positives = 112/201 (55%), Gaps = 3/201 (1%)
Frame = +1
Query: 70 IKMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGIC 249
+++ +KF +S RVK + H PW+LASL++G + +W+Y+ T+++ FD + PVR
Sbjct: 5 LEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAK 64
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 429
F ++ V+G DD I+V+NY + H DYIR H P++LS+SDD I+
Sbjct: 65 FIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIK 124
Query: 430 IWNWQSR-QCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWDFSGLRKKSVAPGP 603
+W+W+ C + GH+HYVM F+P + + SASLD+++++W+ +P P
Sbjct: 125 LWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-------SPDP 177
Query: 604 -AGLTEHLRNPQATDLFGQAD 663
L HL+ D F D
Sbjct: 178 NFTLDAHLKGVNCVDYFTGGD 198
Score = 102 bits (244), Expect = 3e-22
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYR---MCTLLEKFDEHDGPVRGIC 249
+K FE + ++ ++ H P+VL+S + +I+LWD+ +CT + F+ H V +
Sbjct: 92 IKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQI--FEGHSHYVMQVT 149
Query: 250 FHIQQP-LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQ 420
F+ + F S D IK+WN FTL HL + F + P++++ SDD
Sbjct: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
T ++W++Q++ C+ L GH H V FHP ++++ S D +VR+W
Sbjct: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI-- 258
FE S V ++F+ K AS + I++W+ D H V + +
Sbjct: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGG 197
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
+P ++G DD+ KVW+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/69 (21%), Positives = 37/69 (53%)
Frame = +1
Query: 136 RPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY 315
+P+++ + ++WDY+ + ++ + H V + FH + P+ ++G +D +++W+
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHA 258
Query: 316 KQRRCLFTL 342
R TL
Sbjct: 259 TTYRLENTL 267
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 137 bits (331), Expect = 7e-33
Identities = 60/163 (36%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Frame = +1
Query: 82 KKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQ 261
+KF +S RVK + H PW+LASL++G + +W+Y+ T+ + F+ + PVR F +
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPR 68
Query: 262 QPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 441
+ V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 442 QSR-QCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWD 564
++ C + GH+HYVM F+P + + SASLD+++++W+
Sbjct: 129 ENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Score = 98.3 bits (234), Expect = 4e-21
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYR---MCTLLEKFDEHDGPVRGIC 249
+K FE S ++ ++ H P+VL+S + +I+LWD+ CT + F+ H V +
Sbjct: 92 VKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQI--FEGHSHYVMQVV 149
Query: 250 FHIQQP-LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQ 420
F+ + F S D IK+WN FTL H + F + P++++ SDD
Sbjct: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
T ++W++Q++ C+ L GH H V FHP ++++ S D +VR+W
Sbjct: 210 TAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Frame = +1
Query: 211 KFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEY 390
KF + V+ + H +P ++ + +WNY+ + + +R+ F
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 391 PWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDF- 567
W+++ +DD IR++N+ + + V H+ Y+ C HPT ++S+S D +++WD+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 568 SGLRKKSVAPGPAG-LTEHLRNPQATDLFGQA 660
+G + G + + + + NP+ T+ F A
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASA 161
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI-- 258
FE S V + F+ K AS + I++W+ D H V + +
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
+P ++G DD+ KVW+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/99 (21%), Positives = 49/99 (49%)
Frame = +1
Query: 136 RPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY 315
+P+++ + ++WDY+ + ++ D H V +CFH + P+ ++G +D +++W+
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Query: 316 KQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
R TL L+ + + ++ D+ TI +
Sbjct: 259 TTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 137 bits (331), Expect = 7e-33
Identities = 60/163 (36%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Frame = +1
Query: 82 KKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQ 261
+KF +S RVK + H PW+LASL++G + +W+Y+ T+ + F+ + PVR F +
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPR 68
Query: 262 QPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 441
+ V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 442 QSR-QCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWD 564
++ C + GH+HYVM F+P + + SASLD+++++W+
Sbjct: 129 ENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Score = 98.3 bits (234), Expect = 4e-21
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYR---MCTLLEKFDEHDGPVRGIC 249
+K FE S ++ ++ H P+VL+S + +I+LWD+ CT + F+ H V +
Sbjct: 92 VKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQI--FEGHSHYVMQVV 149
Query: 250 FHIQQP-LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQ 420
F+ + F S D IK+WN FTL H + F + P++++ SDD
Sbjct: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
T ++W++Q++ C+ L GH H V FHP ++++ S D +VR+W
Sbjct: 210 TAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Frame = +1
Query: 211 KFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEY 390
KF + V+ + H +P ++ + +WNY+ + + +R+ F
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 391 PWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDF- 567
W+++ +DD IR++N+ + + V H+ Y+ C HPT ++S+S D +++WD+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 568 SGLRKKSVAPGPAG-LTEHLRNPQATDLFGQA 660
+G + G + + + + NP+ T+ F A
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASA 161
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI-- 258
FE S V + F+ K AS + I++W+ D H V + +
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
+P ++G DD+ KVW+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/99 (21%), Positives = 49/99 (49%)
Frame = +1
Query: 136 RPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY 315
+P+++ + ++WDY+ + ++ D H V +CFH + P+ ++G +D +++W+
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Query: 316 KQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
R TL L+ + + ++ D+ TI +
Sbjct: 259 TTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 137 bits (331), Expect = 7e-33
Identities = 60/163 (36%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Frame = +1
Query: 82 KKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQ 261
+KF +S RVK + H PW+LASL++G + +W+Y+ T+ + F+ + PVR F +
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPR 68
Query: 262 QPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 441
+ V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 442 QSR-QCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWD 564
++ C + GH+HYVM F+P + + SASLD+++++W+
Sbjct: 129 ENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Score = 98.3 bits (234), Expect = 4e-21
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYR---MCTLLEKFDEHDGPVRGIC 249
+K FE S ++ ++ H P+VL+S + +I+LWD+ CT + F+ H V +
Sbjct: 92 VKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQI--FEGHSHYVMQVV 149
Query: 250 FHIQQP-LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQ 420
F+ + F S D IK+WN FTL H + F + P++++ SDD
Sbjct: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
T ++W++Q++ C+ L GH H V FHP ++++ S D +VR+W
Sbjct: 210 TAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Frame = +1
Query: 211 KFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEY 390
KF + V+ + H +P ++ + +WNY+ + + +R+ F
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 391 PWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDF- 567
W+++ +DD IR++N+ + + V H+ Y+ C HPT ++S+S D +++WD+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 568 SGLRKKSVAPGPAG-LTEHLRNPQATDLFGQA 660
+G + G + + + + NP+ T+ F A
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASA 161
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI-- 258
FE S V + F+ K AS + I++W+ D H V + +
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
+P ++G DD+ KVW+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/99 (21%), Positives = 49/99 (49%)
Frame = +1
Query: 136 RPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY 315
+P+++ + ++WDY+ + ++ D H V +CFH + P+ ++G +D +++W+
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Query: 316 KQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
R TL L+ + + ++ D+ TI +
Sbjct: 259 TTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 134 bits (323), Expect = 7e-32
Identities = 58/167 (34%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Frame = +1
Query: 70 IKMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGIC 249
+++ +K +S RVK + H PW+LASL++G + +W+Y+ + + F+ + PVR
Sbjct: 5 LEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAK 64
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 429
F ++ V+G DD I+V+NY + H DYIR H P++LS+SDD I+
Sbjct: 65 FVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIK 124
Query: 430 IWNWQSR-QCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWD 564
+W+W+ C + GH+HYVM F+P + + SASLD+++++W+
Sbjct: 125 LWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
Score = 98.3 bits (234), Expect = 4e-21
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRM---CTLLEKFDEHDGPVRGIC 249
+K FE S ++ ++ H P+VL+S + +I+LWD+ CT + F+ H V +
Sbjct: 92 VKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQI--FEGHSHYVMQVT 149
Query: 250 FHIQQP-LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQ 420
F+ + F S D IK+WN FTL H + F + P++++ SDD
Sbjct: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
T ++W++Q++ C+ L GH H V FHP ++++ S D +VR+W
Sbjct: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 67.3 bits (157), Expect = 9e-12
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI-- 258
FE S V ++F+ K AS + I++W+ D H V + +
Sbjct: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
+P ++G DD+ KVW+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Frame = +1
Query: 211 KFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEY 390
K + V+ + H +P ++ + +WNY+ + + +R+ F
Sbjct: 10 KLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARK 69
Query: 391 PWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDF- 567
W+++ +DD IR++N+ + + V H+ Y+ C HPT ++S+S D +++WD+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 568 SGLRKKSVAPGPAGLTEHLR-NPQATDLFGQA 660
G + G + + NP+ T+ F A
Sbjct: 130 KGWACTQIFEGHSHYVMQVTFNPKDTNTFASA 161
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/99 (20%), Positives = 49/99 (49%)
Frame = +1
Query: 136 RPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY 315
+P+++ + ++WDY+ + ++ + H V +CFH + P+ ++G +D +++W+
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Query: 316 KQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
R TL L+ + + ++ D+ TI +
Sbjct: 259 TTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 95.1 bits (226), Expect = 4e-20
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 1/193 (0%)
Frame = +1
Query: 100 SARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVS 279
++ V ++F + VLA +GVI+LWD ++ F H + FH S
Sbjct: 58 TSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLAS 117
Query: 280 GGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCI 459
G D +K+W+ +++ C+ T GH I T F + W++S D +++W+ + + +
Sbjct: 118 GSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLL 177
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK-KSVAPGPAGLTEHLRNPQ 636
H + FHP E LL + S D++V+ WD S P G+ +P
Sbjct: 178 HEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPD 237
Query: 637 ATDLFGQADAVVK 675
LF D +K
Sbjct: 238 GRTLFCGLDDSLK 250
Score = 74.9 bits (176), Expect = 4e-14
Identities = 32/106 (30%), Positives = 56/106 (52%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 447
LF++GGDDYK+ +W + L +L GH + + F +L+ + I++W+ +
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEE 89
Query: 448 RQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
+ + TGH +FHP + L S S D ++++WD +RKK
Sbjct: 90 AKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWD---IRKK 132
Score = 71.7 bits (168), Expect = 4e-13
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGV-IQLWDYRMCTLLEKFDEHDGPVRGICFH 255
L++F SA V +S K + + + + LW T L H V + F
Sbjct: 8 LQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFD 67
Query: 256 IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
+ L ++G IK+W+ ++ + + GH FH ++ S S D ++IW
Sbjct: 68 SAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIW 127
Query: 436 NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
+ + + CI GH+ + +F P +VS LD V+VWD +
Sbjct: 128 DIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLT 172
Score = 60.5 bits (140), Expect = 1e-09
Identities = 38/165 (23%), Positives = 73/165 (44%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
KM++ F + + FH ++ + + +++WD R ++ + H + I F
Sbjct: 91 KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRF 150
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
VSGG D +KVW+ + L H IR+ FH + + S D+T++
Sbjct: 151 TPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKF 210
Query: 433 WNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDF 567
W+ ++ + I V +FHP + + LD S++V+ +
Sbjct: 211 WDLETFELIGSTRPEATGVRSIKFHP-DGRTLFCGLDDSLKVYSW 254
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 93.9 bits (223), Expect = 9e-20
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
V ++F+++ VLA +GVI+LWD ++ F H + FH SG
Sbjct: 10 VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 69
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
D ++VW+ +++ C+ T GH I T F + W++S D +++W+ + + +
Sbjct: 70 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 129
Query: 469 TGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK-KSVAPGPAGLTEHLRNPQATD 645
H + FHP E LL + S D++V+ WD + P G+ +P
Sbjct: 130 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQT 189
Query: 646 LFGQADAVVK 675
LF D +K
Sbjct: 190 LFCGLDDGLK 199
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/116 (27%), Positives = 56/116 (48%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H PV + F+ ++ L ++G IK+W+ ++ + + GH FH ++
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLA 65
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
S S D +R+W+ + + CI GH + +F P +VS LD V+VWD +
Sbjct: 66 SGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLT 121
Score = 58.0 bits (134), Expect = 5e-09
Identities = 38/165 (23%), Positives = 70/165 (42%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
KM++ F + + FH ++ + + +++WD R ++ + H + I F
Sbjct: 40 KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEF 99
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
VSGG D +KVW+ + L H IR+ FH + + S D+T++
Sbjct: 100 SPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKF 159
Query: 433 WNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDF 567
W+ ++ + I V FHP L LD ++V+ +
Sbjct: 160 WDLETFELIGTTRPEATGVRAIAFHPDGQTLF-CGLDDGLKVYSW 203
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +1
Query: 337 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTE 516
+L GH + + F+ E +L+ + I++W+ + + + TGH +FHP
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 517 DLLVSASLDQSVRVWD 564
+ L S S D ++RVWD
Sbjct: 62 EFLASGSSDTNLRVWD 77
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/155 (25%), Positives = 74/155 (47%)
Frame = +1
Query: 100 SARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVS 279
S+ + ++F A V A +G I+LWD ++ H + FH F S
Sbjct: 59 SSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFAS 118
Query: 280 GGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCI 459
G D +K+W+ +++ C+ T GH + F + W++S +D +++W+ + + +
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ H + FHP E LL + S D++V+ WD
Sbjct: 179 TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 70.1 bits (164), Expect = 1e-12
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Frame = +1
Query: 205 LEKFDEHDGPVRGICFHIQQP---LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTF 375
L++F H V C I + + V+GG+D+K+ +W + + +L GH I +
Sbjct: 9 LQEFVAHSAAVN--CLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT 66
Query: 376 FHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVR 555
F + + + TI++W+ + + + LTGH + FHP + S SLD +++
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 556 VWDFSGLRKK 585
+WD +RKK
Sbjct: 127 IWD---IRKK 133
Score = 66.9 bits (156), Expect = 1e-11
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASL-HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH 255
L++F SA V + K VL + + + LW + H + + F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 256 IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
+ L +G IK+W+ ++ + + TL GH + FH + S S D ++IW
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 436 NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
+ + + CI GH V +F P +VS D V+VWD +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYK 297
+ FH + + + +++WD R + + H V + F VSGG+D
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNI 166
Query: 298 IKVWNYKQRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRQCISVLTG 474
+KVW+ + L H I++ FH HE+ + + S D+T++ W+ ++ + I
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEF-LLATGSADRTVKFWDLETFELIGSGGP 225
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLR 579
V C F+P + V L +S++++ + +R
Sbjct: 226 ETAGVRCLSFNP-DGKTVLCGLQESLKIFSWEPIR 259
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/86 (17%), Positives = 38/86 (44%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K+L +F++ +++ + FH + + ++ WD L+ VR + F
Sbjct: 176 KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSF 235
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRC 330
+ + G + +K+++++ RC
Sbjct: 236 NPDGKTVLCGLQE-SLKIFSWEPIRC 260
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/155 (25%), Positives = 74/155 (47%)
Frame = +1
Query: 100 SARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVS 279
S+ + ++F A V A +G I+LWD ++ H + FH F S
Sbjct: 59 SSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFAS 118
Query: 280 GGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCI 459
G D +K+W+ +++ C+ T GH + F + W++S +D +++W+ + + +
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ H + FHP E LL + S D++V+ WD
Sbjct: 179 TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 70.1 bits (164), Expect = 1e-12
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Frame = +1
Query: 205 LEKFDEHDGPVRGICFHIQQP---LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTF 375
L++F H V C I + + V+GG+D+K+ +W + + +L GH I +
Sbjct: 9 LQEFVAHSAAVN--CLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT 66
Query: 376 FHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVR 555
F + + + TI++W+ + + + LTGH + FHP + S SLD +++
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 556 VWDFSGLRKK 585
+WD +RKK
Sbjct: 127 IWD---IRKK 133
Score = 66.9 bits (156), Expect = 1e-11
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASL-HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH 255
L++F SA V + K VL + + + LW + H + + F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 256 IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
+ L +G IK+W+ ++ + + TL GH + FH + S S D ++IW
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 436 NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
+ + + CI GH V +F P +VS D V+VWD +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYK 297
+ FH + + + +++WD R + + H V + F VSGG+D
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNI 166
Query: 298 IKVWNYKQRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRQCISVLTG 474
+KVW+ + L H I++ FH HE+ + + S D+T++ W+ ++ + I
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEF-LLATGSADRTVKFWDLETFELIGSGGP 225
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLR 579
V C F+P + V L +S++++ + +R
Sbjct: 226 ETAGVRCLSFNP-DGKTVLCGLQESLKIFSWEPIR 259
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/86 (17%), Positives = 38/86 (44%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K+L +F++ +++ + FH + + ++ WD L+ VR + F
Sbjct: 176 KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSF 235
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRC 330
+ + G + +K+++++ RC
Sbjct: 236 NPDGKTVLCGLQE-SLKIFSWEPIRC 260
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/155 (26%), Positives = 73/155 (47%)
Frame = +1
Query: 100 SARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVS 279
S+ + ++F A V A +G I+LWD ++ H + FH F S
Sbjct: 152 SSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFAS 211
Query: 280 GGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCI 459
G D +K+W+ +++ C+ T GH + F + WI+S +D +++W+ + + +
Sbjct: 212 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLL 271
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
H + FHP E LL + S D++V+ WD
Sbjct: 272 HEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD 306
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/106 (28%), Positives = 56/106 (52%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 447
+ V+GG+D+K+ +W + + +L GH I + F + + + TI++W+ +
Sbjct: 124 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 183
Query: 448 RQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
+ + LTGH + FHP + S SLD ++++WD +RKK
Sbjct: 184 AKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWD---IRKK 226
Score = 67.3 bits (157), Expect = 9e-12
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 1/168 (0%)
Frame = +1
Query: 70 IKMLKKFETKSARVKGISFHAKRPWVLASL-HNGVIQLWDYRMCTLLEKFDEHDGPVRGI 246
I ++F SA V + K VL + + + LW + H + +
Sbjct: 99 ISSFREFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV 158
Query: 247 CFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 426
F + L +G IK+W+ ++ + + TL GH + FH + S S D +
Sbjct: 159 TFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNL 218
Query: 427 RIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
+IW+ + + CI GH V +F P +VS D V+VWD +
Sbjct: 219 KIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT 266
Score = 56.8 bits (131), Expect = 1e-08
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K+++ + ++FH + + + +++WD R + + H V + F
Sbjct: 185 KVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF 244
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIR 429
VSGG+D +KVW+ + L H I++ FH HE+ + + S D+T++
Sbjct: 245 TPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEF-LLATGSADKTVK 303
Query: 430 IWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLR 579
W+ ++ + I V C F+P + V L +S++++ + +R
Sbjct: 304 FWDLETFELIGSGGTETTGVRCLTFNP-DGKSVLCGLQESLKIFSWEPIR 352
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKF-DEHDGPVRGIC 249
K LK S V + F+ +++S ++G+ ++WD ++ D+ + PV +
Sbjct: 146 KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVR 205
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDY---IRTTFFHHEYPWILSASDDQ 420
F + G D +++WN + L T GH++ I + F I+S S+D
Sbjct: 206 FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN 265
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
+ +W S++ + L GH VM HPTE+L+ S SLD++VR+W
Sbjct: 266 CVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/120 (30%), Positives = 64/120 (53%)
Frame = +1
Query: 205 LEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH 384
+++F H+ + + F VS DD +K+W+ + + TL+GH +Y F+
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 385 EYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ I+S S D+T+RIW+ + +C+ VL H+ V F+ L+VS+S D R+WD
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/168 (22%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI 258
+++F + ++F + +++++ + ++LWD +L++ H + F+
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
Q + VSG D +++W+ +CL L H D + F+ + I+S+S D RIW+
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Query: 439 WQSRQCI-SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLR 579
+ C+ +++ N V +F P ++ +LD ++R+W+ S +
Sbjct: 184 SGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = +1
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
GH + I F + +I+SASDD+T+++W+ ++ I L GH +Y C F+P +++
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 526 VSASLDQSVRVWDFSGLRKKSVAP 597
VS S D++VR+WD + + V P
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLP 152
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 337 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW-----NWQSRQCISVLTGHNHYVMCAQ 501
TL H + + F + + SAS D+TIR + N + + TGH + +
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 502 FHPTEDLLVSASLDQSVRVWD 564
F +VSAS D+++++WD
Sbjct: 79 FSSDARFIVSASDDKTLKLWD 99
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 466 LTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAP 597
LT HN V +F LL SAS D+++R + + + P
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEP 63
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 81.8 bits (193), Expect = 4e-16
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H G VR + F F +G D IK+W+ TL GH+ +R + + ++
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMF 228
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
SA DD+ ++ W+ + + I GH H V C HPT D++++ D RVWD +
Sbjct: 229 SAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQ 288
Query: 583 KSVAPGPAGLTEHLRNPQATDLF-GQADAVVK 675
V P + + L P + G D+ +K
Sbjct: 289 IFVLPHDSDVFSVLARPTDPQVITGSHDSTIK 320
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/152 (25%), Positives = 69/152 (45%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
V+ ++F W + I++WD L H G VRG+ + S GD
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGD 232
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
D ++K W+ +Q + + + GHL + H +L+ D R+W+ +++ I VL
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVL 292
Query: 469 TGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
H+ V PT+ +++ S D +++ WD
Sbjct: 293 P-HDSDVFSVLARPTDPQVITGSHDSTIKFWD 323
Score = 61.7 bits (143), Expect = 4e-10
Identities = 32/146 (21%), Positives = 70/146 (47%)
Frame = +1
Query: 106 RVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGG 285
+V+G++ + ++ ++ + ++ WD ++ + H V + H + ++GG
Sbjct: 214 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGG 273
Query: 286 DDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISV 465
D +VW+ + + +F +L H + + P +++ S D TI+ W+ + + ++
Sbjct: 274 RDSVCRVWDIRTKMQIF-VLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMAT 332
Query: 466 LTGHNHYVMCAQFHPTEDLLVSASLD 543
+T H V HP E+ VSAS D
Sbjct: 333 ITNHKKTVRAMALHPKENDFVSASAD 358
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED 519
L GHL ++R+ F W + S D+TI+IW+ + LTGH V
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 520 LLVSASLDQSVRVWD 564
+ SA D+ V+ WD
Sbjct: 226 YMFSAGDDKQVKCWD 240
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 463 VLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
VL GH +V F P+ + + S D+++++WD
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 198
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/152 (25%), Positives = 70/152 (46%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
V+ ++F W + I++WD L H VRG+ + S GD
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
D ++K W+ +Q + + + GHL + H +L+ D R+W+ +++ I L
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFAL 298
Query: 469 TGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+GH++ V PT+ +V+ S D +++ WD
Sbjct: 299 SGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Score = 77.4 bits (182), Expect = 8e-15
Identities = 36/114 (31%), Positives = 56/114 (49%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H G VR + F F +G D IK+W+ TL GH++ +R + + ++
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMF 234
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
SA DD+ ++ W+ + + I GH V C HPT D+L++ D RVWD
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWD 288
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/148 (23%), Positives = 72/148 (48%)
Frame = +1
Query: 106 RVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGG 285
+V+G++ + ++ ++ + ++ WD ++ + H V + H + ++GG
Sbjct: 220 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGG 279
Query: 286 DDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISV 465
D +VW+ + + +F L GH + + + F P +++ S D TI+ W+ + + +S
Sbjct: 280 RDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMST 339
Query: 466 LTGHNHYVMCAQFHPTEDLLVSASLDQS 549
LT H V HP E+ SAS D +
Sbjct: 340 LTHHKKSVRAMTLHPKENAFASASADNT 367
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/165 (21%), Positives = 69/165 (41%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K+++ + + V ++ H +L + V ++WD R + HD V +
Sbjct: 251 KVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFT 310
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
P V+G D IK W+ + + + TL H +R H + SAS D T +
Sbjct: 311 RPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKF 370
Query: 433 WNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDF 567
+ C ++L+ ++ A + ++V+ + S+ WD+
Sbjct: 371 SLPKGEFCHNMLS-QQKTIINAMAVNEDGVMVTGGDNGSIWFWDW 414
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +1
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
GHL ++R+ F W + S D+TI+IW+ + LTGH V +
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM 233
Query: 526 VSASLDQSVRVWD 564
SA D+ V+ WD
Sbjct: 234 FSAGDDKQVKCWD 246
Score = 30.7 bits (66), Expect = 0.93
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 463 VLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
V+ GH +V F P+ + + S D+++++WD
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 204
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 77.8 bits (183), Expect = 6e-15
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI 258
LK E +A + + F + ++ + + LW +L+ +++ H + + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 259 QQPLFVSGGDDYKIKVWNYKQR-RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
S DD +++W+ + CL L GH +++ F+ I+S S D+TIRIW
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 436 NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
++ +C+ ++ H+ + F+ L+VSAS D S ++WD
Sbjct: 156 EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD 198
Score = 74.5 bits (175), Expect = 6e-14
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +1
Query: 187 YRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIR 366
Y+ L+ + H + + F L S D + +W+ + GH I
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGIS 89
Query: 367 TTFFHHEYPWILSASDDQTIRIWNWQS-RQCISVLTGHNHYVMCAQFHPTEDLLVSASLD 543
+ + + SASDD T+RIW+ +S +C+ VL GH ++V C F+P +L+VS S D
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 544 QSVRVWD 564
+++R+W+
Sbjct: 150 ETIRIWE 156
Score = 62.9 bits (146), Expect = 2e-10
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K ++ + S + + F+ ++++ H+G ++WD + T L+ + P
Sbjct: 161 KCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAK 220
Query: 253 HIQQPLFVSGGD-DYKIKVWNYKQRRCLFTLLGHLDY---IRTTFFHHEYPWILSASDDQ 420
F+ D +K+ NY + L GH + I + F +I+S S+D
Sbjct: 221 FSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN 280
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSAS--LDQSVRVW 561
+ +W+ Q+R + L GH V+ HP ++ + S+ LD+++R+W
Sbjct: 281 CVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/167 (21%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Frame = +1
Query: 76 MLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRM-CTLLEKFDEHDGPVRGICF 252
++ ++E S+ + +++ + + ++ + +++WD R L+ H V + F
Sbjct: 77 LIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNF 136
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
+ L VSG D I++W K +C+ + H I + F+ + I+SAS D + +I
Sbjct: 137 NPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 433 WNWQSRQCI-SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
W+ + C+ +++ + V A+F P ++ A+LD ++++ +++
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYA 243
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/133 (27%), Positives = 67/133 (50%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTL 342
+G I++WD T F+ H G V + ++ + SG D I +W+ LF L
Sbjct: 85 DGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRL 144
Query: 343 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDL 522
GH D + F ++S+S D+ +R+W+ +++ C+ +++GH+ V P E
Sbjct: 145 RGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERY 204
Query: 523 LVSASLDQSVRVW 561
+V+ S DQ +R +
Sbjct: 205 VVTGSADQELRFY 217
Score = 57.2 bits (132), Expect = 9e-09
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H PV I L V+G D +K+W C ++ H D + F ++
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLF 640
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
S D+ ++ W+ + + L GH+ + C D LV+ S D+S+R WD S
Sbjct: 641 SIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRS 696
Score = 47.6 bits (108), Expect = 8e-06
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY--KQRRCLF 336
+GV+++ D T +E+ H G + I FV+ D+++K W Y KQ+
Sbjct: 466 SGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKA 525
Query: 337 TLLGHLDYIRTTFFHHEYPWILSASD---------DQTIRIWNWQSRQCISVLTGHNHYV 489
T + +++ + + + + D D T++++ S + L GH V
Sbjct: 526 TKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPV 585
Query: 490 MCAQFHPTEDLLVSASLDQSVRVW--DFSGLRKKSVAPGPAGL-TEHLRNPQATDLFGQA 660
MC +L+V+ S D+++++W DF K A G + + + +RN G+
Sbjct: 586 MCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGK- 644
Query: 661 DAVVK 675
D +VK
Sbjct: 645 DRLVK 649
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 447
L G D I++W+ ++ C H + ++ + S S D I +W+
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVG 137
Query: 448 RQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ L GH V F LVS+S D+ +RVWD
Sbjct: 138 ESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWD 176
Score = 33.9 bits (74), Expect = 0.099
Identities = 23/116 (19%), Positives = 48/116 (41%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQP 267
F + V + ++ + + + I LWD + L + H V + F
Sbjct: 102 FNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGK 161
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
VS D ++VW+ + + C+ + GH + + E ++++ S DQ +R +
Sbjct: 162 KLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY 217
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 74.9 bits (176), Expect = 4e-14
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +1
Query: 70 IKMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLL--------EKFDEH 225
IK KK + AR F ++ +S +G I++WDY L E F H
Sbjct: 208 IKFGKKSHAECAR-----FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMH 262
Query: 226 DGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILS 405
D PV I F + SG D KIK+W + C+ H + + F + +LS
Sbjct: 263 DDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLS 322
Query: 406 ASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
S DQT RI +S + + GH YV A F +++AS D +V+VWD
Sbjct: 323 TSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/114 (22%), Positives = 49/114 (42%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYK 297
I F + + +G I++W R + +FD H V + F +S D
Sbjct: 269 IDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Query: 298 IKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCI 459
++ K + L GH Y+ F + I++AS D T+++W+ ++ C+
Sbjct: 329 ARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCL 382
Score = 34.7 bits (76), Expect = 0.057
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 472 GHNHYVMCAQFHPTEDLLVSASLDQSVRVWDF-SGLRKKSV 591
G + CA+F P L S+S+D + VWD+ SG KK +
Sbjct: 211 GKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDL 251
Score = 33.9 bits (74), Expect = 0.099
Identities = 35/175 (20%), Positives = 72/175 (41%), Gaps = 12/175 (6%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K+LK+F ++ V F + ++ + + +++WD + L+ F + P+RG
Sbjct: 338 KLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTF-KPPPPLRGTDA 396
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHL------------DYIRTTFFHHEYPW 396
+ ++ I V N + TL G + D++ + W
Sbjct: 397 SVNSIHLFPKNTEH-IVVCNKTSSIYIMTLQGQVVKSFSSGNREGGDFVAACV-STKGDW 454
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
I +D+ + +N+QS + H V+ HP +LL + S D ++++W
Sbjct: 455 IYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTMKLW 509
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 72.5 bits (170), Expect = 2e-13
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Frame = +1
Query: 160 HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFT 339
H+ I++WD + + H+GPV G+ H L + G D K+ VW+ C
Sbjct: 80 HSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHY 139
Query: 340 LLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWNWQS----RQCISVLTGHNHYVMCAQ 501
GH + + FH + ++S SDD T+R+W+ + ++C++++ H V
Sbjct: 140 FRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIA 199
Query: 502 FHPTEDLLVSASLDQSVRVWD 564
L SA D+ V +WD
Sbjct: 200 LSEDGLTLFSAGRDKVVNLWD 220
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = +1
Query: 295 KIKVWNYKQRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRIWNWQSRQCISV 465
+++V++ C + L GH + + T I++ S D+T+R+WN S+ CI V
Sbjct: 382 EVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV 441
Query: 466 LTGHNHYVMCAQF-HPTEDLLVSASLDQSVRVWDFSGLRKKSVAP 597
TGHN ++ F + VS S D++++VW G+ + S P
Sbjct: 442 GTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEP 486
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 447
L S G +I+VW+ + +C+ + GH + H + +A D+ + +W+
Sbjct: 74 LLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDG 133
Query: 448 RQCISVLTGHNHYVMCAQFHP--TEDLLVSASLDQSVRVWDFS 570
C GH V FHP +++L+S S D +VRVWD +
Sbjct: 134 GFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLN 176
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/114 (24%), Positives = 47/114 (41%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
HD + + L +G +D +W + TL GH I + F ++
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM 557
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+AS D+T++IW C+ GH V+ A F VS D +++W+
Sbjct: 558 TASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWN 611
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +1
Query: 70 IKMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGIC 249
+K ++ ++ V G++ HA + + + + +WD F H G V I
Sbjct: 92 LKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSIL 151
Query: 250 FH--IQQPLFVSGGDDYKIKVWNYK----QRRCLFTLLGHLDYIRTTFFHHEYPWILSAS 411
FH + + +SG DD ++VW+ +++CL + H + + + + SA
Sbjct: 152 FHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAG 211
Query: 412 DDQTIRIWNWQSRQC 456
D+ + +W+ C
Sbjct: 212 RDKVVNLWDLHDYSC 226
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = +1
Query: 337 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTE 516
T+ G D + + + SA + IR+W+ ++ +CI GH VM H +
Sbjct: 55 TIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASG 114
Query: 517 DLLVSASLDQSVRVWDFSG 573
LL +A D+ V VWD G
Sbjct: 115 GLLATAGADRKVLVWDVDG 133
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 11/144 (7%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQ-PLFVSGGDDYKIKVWNYK---------- 318
++LW+ + + H+G + + F + FVSG D +KVW+
Sbjct: 428 VRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPI 487
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCA 498
+ + H I + + + S+D+T IW + L GH +
Sbjct: 488 NLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 499 QFHPTEDLLVSASLDQSVRVWDFS 570
+F + +++AS D++V++W S
Sbjct: 548 EFSTVDQCVMTASGDKTVKIWAIS 571
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/102 (20%), Positives = 41/102 (40%)
Frame = +1
Query: 256 IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
+ Q + + GD +K+W CL T GH + F + +S D +++W
Sbjct: 552 VDQCVMTASGDK-TVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLW 610
Query: 436 NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
N + +CI+ H V +++ + D + +W
Sbjct: 611 NVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/111 (22%), Positives = 44/111 (39%)
Frame = +1
Query: 106 RVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGG 285
R+ + F V+ + + +++W + L+ F+ H V F FVS G
Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCG 602
Query: 286 DDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
D +K+WN C+ T H D + + I + D I +W+
Sbjct: 603 ADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWH 653
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHL-DYIRTTFFHHEYPWILSASDDQTIRIWNW- 441
L V+G D +++WN + C+ GH D + F + + +S S D+T+++W+
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLD 477
Query: 442 ----QSRQCI-----SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
S + I SV+ H+ + + L+ + S D++ +W
Sbjct: 478 GISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIW 526
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI 258
LK FE ++ V SF ++ +G+++LW+ + +D+H+ V +
Sbjct: 576 LKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGK 635
Query: 259 QQPLFVSGGDDYKIKVWN 312
+ + +GG D I +W+
Sbjct: 636 KTEMIATGGGDAVINLWH 653
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLR 579
S + G + + P + LL SA + +RVWD L+
Sbjct: 54 STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLK 93
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 72.5 bits (170), Expect = 2e-13
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
V+ + + + L+ +G ++LWD +F H V + F + VS
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 289 DYKIKVWNYKQRRCLFTLL----GHLDYIRTTFFHHE--YPWILSASDDQTIRIWNWQSR 450
D IK+WN C +T+ GH D++ F P I+SAS D+T+++WN +
Sbjct: 126 DRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC 184
Query: 451 QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
+ S L GH YV P L S D V +WD + +K
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 228
Score = 60.9 bits (141), Expect = 8e-10
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQ 453
+SG D ++++W+ +GH + + F + I+SAS D+TI++WN +
Sbjct: 79 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG-E 137
Query: 454 CISVLT----GHNHYVMCAQFHPT--EDLLVSASLDQSVRVWDFSGLRKKSVAPGPAG 609
C ++ GH +V C +F P + +VSAS D++V+VW+ S + +S G G
Sbjct: 138 CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG 195
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Frame = +1
Query: 301 KVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHN 480
K + QRR L GH ++ + + LS S D +R+W+ + GH
Sbjct: 50 KAYGVAQRR----LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT 105
Query: 481 HYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAG 609
V+ F +VSAS D+++++W+ G K +++ G G
Sbjct: 106 KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEG 148
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/111 (22%), Positives = 51/111 (45%)
Frame = +1
Query: 136 RPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY 315
+P ++++ + +++W+ C L H G V + L SGG D + +W+
Sbjct: 164 QPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Query: 316 KQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
+ + L++L + I F W L A+ + I+IW+ +S+ + L
Sbjct: 224 AEGKKLYSLEAN-SVIHALCFSPNRYW-LCAATEHGIKIWDLESKSIVEDL 272
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 70.9 bits (166), Expect = 7e-13
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Frame = +1
Query: 76 MLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH 255
+L+ FE R+ ++FH ++ + ++ +LWD L + H V GI F
Sbjct: 331 LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQ 390
Query: 256 IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
L S G D +VW+ + R + GH+ + + F + S +D RIW
Sbjct: 391 QDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
Query: 436 NWQSRQCISVLTGHNHYVMCAQFHPTED-LLVSASLDQSVRVW---DFS 570
+ + R+ + ++ H + V ++ P E L +AS D V +W DFS
Sbjct: 451 DLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFS 499
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Frame = +1
Query: 91 ETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL 270
E S V GI+F + + + ++WD R + F H PV + F
Sbjct: 378 EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYH 437
Query: 271 FVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRIWNWQS 447
SGG+D + ++W+ + R+ L+ + H + + + + + L+ AS D + IW+ +
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRD 497
Query: 448 RQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
+ L GH V + + S D+++++W SG
Sbjct: 498 FSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSG 539
Score = 51.2 bits (117), Expect = 6e-07
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 1/147 (0%)
Frame = +1
Query: 199 TLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFF 378
TLL+ F+ H + + FH + D ++W+ L GH + F
Sbjct: 330 TLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAF 389
Query: 379 HHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRV 558
+ S D R+W+ ++ + I V GH V F P L S D R+
Sbjct: 390 QQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRI 449
Query: 559 WDFSGLRKKSVAPGPAGLTEHLR-NPQ 636
WD + + P A L ++ PQ
Sbjct: 450 WDLRMRKSLYIIPAHANLVSQVKYEPQ 476
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 427 RIWNW-QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
++W Q I+VL H F P +D L +AS D++ ++W G
Sbjct: 280 KLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDG 329
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/160 (25%), Positives = 73/160 (45%)
Frame = +1
Query: 100 SARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVS 279
S V +F +VL+S + I+LW ++ L + H+ PV F F S
Sbjct: 418 SGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFAS 477
Query: 280 GGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCI 459
D ++W+ + + L + GHL + +H +I + S D+T+R+W+ Q+ +C+
Sbjct: 478 CSHDRTARIWSMDRIQPLRIMAGHLSDVD---WHPNCNYIATGSSDKTVRLWDVQTGECV 534
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLR 579
+ GH V+ P + S D ++ +WD S R
Sbjct: 535 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTAR 574
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/134 (24%), Positives = 63/134 (47%)
Frame = +1
Query: 229 GPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSA 408
G + + +H +G D +++W+ + C+ +GH + + + ++ S
Sbjct: 500 GHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASG 559
Query: 409 SDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKS 588
+D TI +W+ + +CI+ L GHN V + LL S S D +V++WD + K +
Sbjct: 560 DEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 619
Query: 589 VAPGPAGLTEHLRN 630
A G + LR+
Sbjct: 620 KAEEKNGNSNRLRS 633
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/93 (31%), Positives = 45/93 (48%)
Frame = +1
Query: 322 RRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQ 501
RR LLGH + + F ++LS+S D TIR+W+ + + GHN+ V AQ
Sbjct: 408 RRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQ 467
Query: 502 FHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPG 600
F P S S D++ R+W ++ + G
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAG 500
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/114 (28%), Positives = 51/114 (44%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H GPV F +S D I++W+ K L GH + F +
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFA 476
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
S S D+T RIW+ Q + ++ GH + +HP + + + S D++VR+WD
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWD 527
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +1
Query: 100 SARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVS 279
+ + + +H ++ + ++LWD + + F H V + S
Sbjct: 499 AGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMAS 558
Query: 280 GGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
G +D I +W+ RC+ L+GH + + + E + S S D T+++W+
Sbjct: 559 GDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD 611
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 400 LSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
L A +D + + R+ ++L GH+ V A F P D ++S+S D ++R+W
Sbjct: 392 LQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLW 445
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
V+ + + + L+ +G ++LWD +F H V + F VS
Sbjct: 66 VQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASR 125
Query: 289 DYKIKVWNYKQRRCLFTLL---GHLDYIRTTFFHHE--YPWILSASDDQTIRIWNWQSRQ 453
D IK+WN C +T+ GH +++ F P I+SAS D+T+++WN Q+ +
Sbjct: 126 DRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK 184
Query: 454 CISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
+ L GH+ Y+ P L S D + +WD + +K
Sbjct: 185 LRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK 227
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW--QS 447
+SG D ++++W+ +GH + + F + I+SAS D+TI++WN +
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGEC 138
Query: 448 RQCISVLTGHNHYVMCAQFHPTE--DLLVSASLDQSVRVWDFSGLRKKSVAPGPAG 609
+ IS GH +V C +F P +VSAS D++V+VW+ + ++ G +G
Sbjct: 139 KYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSG 194
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/110 (22%), Positives = 54/110 (49%)
Frame = +1
Query: 139 PWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK 318
P ++++ + +++W+ + C L H G + + L SGG D I +W+
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
+ + L++L I + F W+ +A+++ +IRIW+ +S+ + L
Sbjct: 224 EGKKLYSLEAG-SIIHSLCFSPNRYWLCAATEN-SIRIWDLESKSVVEDL 271
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/98 (24%), Positives = 47/98 (47%)
Frame = +1
Query: 301 KVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHN 480
K + QRR + GH +++ + + LS S D +R+W+ + + GH
Sbjct: 50 KSYGVAQRR----MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHT 105
Query: 481 HYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVA 594
V+ F +VSAS D+++++W+ G K +++
Sbjct: 106 KDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTIS 143
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
V+ + + + L+ +G ++LWD +F H V + F VS
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASR 125
Query: 289 DYKIKVWNYKQRRCLFTLL---GHLDYIRTTFFHHE--YPWILSASDDQTIRIWNWQSRQ 453
D IK+WN C +T+ GH +++ F P I+SAS D+T+++WN Q+ +
Sbjct: 126 DRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK 184
Query: 454 CISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
+ L GH+ Y+ P L S D + +WD + +K
Sbjct: 185 LRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK 227
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW--QS 447
+SG D ++++W+ +GH + + F + I+SAS D+TI++WN +
Sbjct: 79 LSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGEC 138
Query: 448 RQCISVLTGHNHYVMCAQFHPTE--DLLVSASLDQSVRVWDFSGLRKKSVAPGPAG 609
+ IS GH +V C +F P +VSAS D++V+VW+ + ++ G +G
Sbjct: 139 KYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSG 194
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/100 (26%), Positives = 47/100 (47%)
Frame = +1
Query: 301 KVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHN 480
K + QRR L GH ++ + + LS S D +R+W+ + + GH
Sbjct: 50 KSYGVAQRR----LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHT 105
Query: 481 HYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPG 600
V+ F +VSAS D+++++W+ G K +++ G
Sbjct: 106 KDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEG 145
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/110 (22%), Positives = 54/110 (49%)
Frame = +1
Query: 139 PWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK 318
P ++++ + +++W+ + C L H G + + L SGG D I +W+
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
+ + L++L I + F W+ +A+++ +IRIW+ +S+ + L
Sbjct: 224 EGKKLYSLEAG-SIIHSLCFSPNRYWLCAATEN-SIRIWDLESKSVVEDL 271
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H V+ + +H + L VSGG D +K+W+ + R L +L GH + + + ++ W+L
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLL 326
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVW 561
+AS DQ I++++ ++ + + GH V +HP E+ VS S D S+ W
Sbjct: 327 TASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 19/159 (11%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQR 324
++ +G LW+ + HD P+R + + + VSG D +K W
Sbjct: 138 LITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMN 197
Query: 325 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLT----------- 471
H + IR F S SDD T+++W++ S LT
Sbjct: 198 NVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIR 257
Query: 472 --------GHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
GH V +HPT+ LLVS DQ V++WD
Sbjct: 258 FGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWD 296
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
VK + +H + +++ + +++LWD R L H V + ++ ++
Sbjct: 271 VKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASK 330
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFH--HEYPWILSASDDQTIRIWN-WQSRQCI 459
D IK+++ + + L + GH + + +H HE + +S S D +I W I
Sbjct: 331 DQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHE-EYFVSGSSDGSICHWIVGHENPQI 389
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
+ H++ V +HP LL S S D + + W
Sbjct: 390 EIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/112 (24%), Positives = 46/112 (41%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQ 453
++G + +WN + L H IR+ + H +++S D T++ W
Sbjct: 139 ITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNN 198
Query: 454 CISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAG 609
+ T H + F T+ S S D +V+VWDF+ +S G G
Sbjct: 199 VKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGYIG 250
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/158 (19%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Frame = +1
Query: 166 GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL 345
G ++ W M + H +R + F F S DD +KVW++ + +L
Sbjct: 187 GTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLT 246
Query: 346 GHLDY-------------------IRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
G++ +++ +H ++S DQ +++W+ +S + + L
Sbjct: 247 GYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSL 306
Query: 469 TGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
GH + V+ +++ + L++AS DQ ++++D +++
Sbjct: 307 HGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKE 344
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 66.9 bits (156), Expect = 1e-11
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Frame = +1
Query: 136 RPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL-FVSGGDDYKIKVWN 312
R ++ +S ++G+++LWD + F EH+ + F P SG DD +K+WN
Sbjct: 766 RNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWN 825
Query: 313 YKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-RQCISVLTGHNHYV 489
+R CL T+ + F + S D ++ ++ R +L+GHN V
Sbjct: 826 INERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAV 885
Query: 490 MCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLT 615
A+F E LV+AS D ++++WD ++ LT
Sbjct: 886 SYAKFLDNE-TLVTASTDNTLKLWDLKKTTHGGLSTNACSLT 926
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 328 CLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFH 507
C FT GHLD + + +LS+S D+T+R+W+ +++ C+ L HN YV C QF+
Sbjct: 513 CSFT--GHLDDVLDLSWSRSQ-LLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFN 568
Query: 508 P-TEDLLVSASLDQSVRVWDFS 570
P ED +S SLD +R+W+ S
Sbjct: 569 PLDEDYFISGSLDAKIRIWNIS 590
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWNWQ 444
L +S D +++W+ + + CL L H DY+ F+ + + +S S D IRIWN
Sbjct: 532 LLLSSSMDKTVRLWDIETQSCL-KLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
Query: 445 SRQCI 459
+RQ +
Sbjct: 591 NRQVV 595
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH-IQQPLFVSGGDDYKIKVWNYKQ 321
+L+S + ++LWD + L+ F H+ V + F+ + + F+SG D KI++WN
Sbjct: 533 LLSSSMDKTVRLWDIETQSCLKLF-AHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISN 591
Query: 322 RR 327
R+
Sbjct: 592 RQ 593
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Frame = +1
Query: 160 HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL-FVSGGDDYKIKVWNYKQRRCLF 336
++GV+Q+WD ++ EH + F P FVSG DD +K+W+ ++R L
Sbjct: 786 YDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLG 845
Query: 337 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ-SRQCISVLTGHNHYVMCAQFHPT 513
T+ + F + + S D + ++ + + L GH V +F +
Sbjct: 846 TIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDS 905
Query: 514 EDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLT 615
E +VSAS D S+++W+ + ++PG LT
Sbjct: 906 E-TIVSASTDNSLKLWNLNKTNSSGLSPGACSLT 938
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDL-LVSASLDQSVRVWDFS 570
++ S D ++IW+ + Q S T H F P++ VS S D SV++W +
Sbjct: 780 YLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSIN 839
Query: 571 GLRKKSVAPGPAGL 612
R PA +
Sbjct: 840 EKRSLGTIWSPANV 853
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/36 (27%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 487 VMCA-QFHPTEDLLVSASLDQSVRVWDFSGLRKKSV 591
V+C+ F P E+ + +A + + ++++DF+ +SV
Sbjct: 718 VVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESV 753
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYK-QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 450
VSG DD+ + +W ++ L GH + +F + WI SAS D+++R+WN +
Sbjct: 333 VSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITG 392
Query: 451 QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPA 606
Q ++V GH V + LL+S S D ++++W+ + K PG A
Sbjct: 393 QFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHA 444
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/109 (21%), Positives = 49/109 (44%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
V + F W+ ++ + ++LW+ + F H GPV + + L +SG
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSK 422
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
D +K+W + ++ L GH D + + + ++S D+ +++W
Sbjct: 423 DSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/113 (22%), Positives = 49/113 (43%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H V + F S D +++WN + + GH+ + + + +L
Sbjct: 359 HQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLL 418
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
S S D T++IW ++++ L GH V + P + +VS D+ +++W
Sbjct: 419 SGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H V + F SG D +++W+ LFT GH +++ T + + ++
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLV 167
Query: 403 SASDDQTIRIWNWQSRQCI-SVLTGHNHYVMCAQFHPTE-----DLLVSASLDQSVRVWD 564
S S I WN + + S LTGH ++ + P V++S D R+WD
Sbjct: 168 SGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWD 227
Query: 565 FSGLRKKSV 591
+ KKS+
Sbjct: 228 IT--LKKSI 234
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 325 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQF 504
RC T+ GH + + F + + S S D T+R+W+ + + GH ++V+ +
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159
Query: 505 HPTEDLLVSASLDQSVRVWD 564
P LVS S + W+
Sbjct: 160 SPDGKHLVSGSKSGEICCWN 179
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYK 297
+SF + + + ++LWD T L H V + + VSG +
Sbjct: 115 VSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGE 174
Query: 298 IKVWNYKQRRCLFT-LLGHLDYIRTTFF---HHEYPW--ILSASDDQTIRIWNWQSRQCI 459
I WN K+ + L GH +I + H P +++S D RIW+ ++ I
Sbjct: 175 ICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSI 234
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
L+GH V C ++ + ++ + S D ++++W+
Sbjct: 235 ICLSGHTLAVTCVKW-GGDGIIYTGSQDCTIKMWE 268
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +1
Query: 253 HIQQPL--FVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 426
H+ P FV+ D ++W+ ++ + L GH + + + I + S D TI
Sbjct: 206 HLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGD-GIIYTGSQDCTI 264
Query: 427 RIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSV 591
++W + I L GH H++ TE +L + + D + R + + ++K++
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLAL-STEYVLRTGAFDHTGRQYPPNEEKQKAL 318
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/179 (20%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQP 267
+++ + V + F W+ + +G +++WD R +++ E V + H Q
Sbjct: 74 YDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEY-ESVAAVNTVVLHPNQT 132
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLD-YIRTTFFHHEYPWILSASDDQTIRIWN-W 441
+SG + I+VW+ + C L+ +D +R+ + +++A++ T +W
Sbjct: 133 ELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLL 192
Query: 442 QSRQCIS------VLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPG 600
+ +Q ++ L HN +++ P L +AS D++V++W+ G + + V G
Sbjct: 193 RGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTG 251
Score = 61.7 bits (143), Expect = 4e-10
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Frame = +1
Query: 82 KKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTL-LEKFDEHDGPVRGICFHI 258
K++E+ +A V + H + +++ NG I++WD R + E E D VR +
Sbjct: 114 KEYESVAA-VNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMW 172
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFT-------LLGHLDYIRTTFFHHEYPWILSASDD 417
+ V+ + VW + + T L H +I ++ +AS D
Sbjct: 173 DGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD 232
Query: 418 QTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAP 597
+T++IWN + VLTGH +V F + LV+AS D + R+W ++ V
Sbjct: 233 KTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQ 292
Query: 598 G 600
G
Sbjct: 293 G 293
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/101 (22%), Positives = 43/101 (42%)
Frame = +1
Query: 205 LEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH 384
L K H+G + + D +K+WN + L GH ++ F
Sbjct: 204 LHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSV 263
Query: 385 EYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFH 507
+ ++++AS D T R+W+ + + + V GH+ +C H
Sbjct: 264 DGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCALH 304
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 331 LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP 510
+ T H + + F + W+ S S+D T++IW+ ++ C V HP
Sbjct: 71 VMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHP 129
Query: 511 TEDLLVSASLDQSVRVWD 564
+ L+S + ++RVWD
Sbjct: 130 NQTELISGDQNGNIRVWD 147
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 64.5 bits (150), Expect = 6e-11
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQP-LFVSGGDDYKIKVWNYKQRRCLFT 339
+G I ++D LL + + H+ PVR + F P + SG DD + + + + + L +
Sbjct: 179 DGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGS 238
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP--- 510
+ GH ++ + + I + S D+T+R+W+ + R I ++ HN V F P
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGG 298
Query: 511 ---TEDLLVSASLDQSVRVWDFS 570
L S S D+SV ++D+S
Sbjct: 299 TGVRAGRLASVSDDKSVSLYDYS 321
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+L+ S D+T+++W + TGH+ V HP+ + S+S+D VRV+D
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFD 88
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Frame = +1
Query: 139 PWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK 318
P +++ +G +LWD R ++ F + + + F +GG D +KVW+ +
Sbjct: 152 PLIISGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ----SRQCISVLTGHNHY 486
+ TL GH D I + ++L+ D + +W+ + +C+ + GH H
Sbjct: 211 KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHN 270
Query: 487 ----VMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAG 609
++ + P + + S D+ V +WD + R PG G
Sbjct: 271 FEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTG 315
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGIC-FHIQQPLFVSGGDDYKIKVWNYKQ 321
++++ + ++ WD ++K EH V C PL +SG DD K+W+ +Q
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ 170
Query: 322 RRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQ 501
R + T I F I + D +++W+ + + L GH +
Sbjct: 171 RGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMS 229
Query: 502 FHPTEDLLVSASLDQSVRVWD 564
P L++ +D + VWD
Sbjct: 230 LSPDGSYLLTNGMDNKLCVWD 250
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 8/157 (5%)
Frame = +1
Query: 106 RVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGG 285
++ +SF + + +++WD R + H + G+ ++ G
Sbjct: 182 QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNG 241
Query: 286 DDYKIKVWNYK----QRRCLFTLLGHLDYIRTTFFHHEYP----WILSASDDQTIRIWNW 441
D K+ VW+ + Q RC+ GH + + + S D+ + IW+
Sbjct: 242 MDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Query: 442 QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSV 552
SR+ I L GH V FHPTE ++ S S D+++
Sbjct: 302 TSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWN-YKQRRCLFTLLGHLDYIRTTFFHHEYPWI 399
H V + F+ L SG D +I +W + + L GH + I + + I
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQI 111
Query: 400 LSASDDQTIRIWNWQSRQCISVLTGHNHYV-MCAQFHPTEDLLVSASLDQSVRVWD 564
+SAS D+T+R W+ ++ + I + H+ +V C L++S S D + ++WD
Sbjct: 112 VSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 331 LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR-QCISVLTGHNHYVMCAQFH 507
+ L GH + T F+ I S S D+ I +W + VL GH + ++ +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 508 PTEDLLVSASLDQSVRVWDF-SGLRKKSVA 594
+VSAS D++VR WD +G + K +A
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMA 135
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 63.7 bits (148), Expect = 1e-10
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Frame = +1
Query: 199 TLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVW-NY-KQRRCLFTLLGHLDYIRTT 372
T+LE + H VR + L + D +W NY + C+ TL GH + +++
Sbjct: 67 TVLE--ETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSV 124
Query: 373 FFHHEYPWILSASDDQTIRIWN---WQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLD 543
++ + + S D+++ IW C +VLTGH V Q+HPT D+L S S D
Sbjct: 125 SWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYD 184
Query: 544 QSVRVW 561
+++VW
Sbjct: 185 NTIKVW 190
Score = 46.4 bits (105), Expect = 2e-05
Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 14/171 (8%)
Frame = +1
Query: 91 ETKSARVKGISFHAKRPWVLASLHNGVIQLW-DYRM-CTLLEKFDEHDGPVRGICFHIQQ 264
ET + V+ ++ + + +G +W +Y + + H+ V+ + ++
Sbjct: 71 ETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASG 130
Query: 265 PLFVSGGDDYKIKVWNYKQRR---CLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
+ D + +W + C L GH ++ +H + S S D TI++W
Sbjct: 131 SCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
Query: 436 NWQSR-----QCISVL----TGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
W QC+ L GH+ V F+ D +V+ S D ++++W
Sbjct: 191 -WSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 41.1 bits (92), Expect = 7e-04
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Frame = +1
Query: 265 PLFVSGGDDYKIKVWNYKQRRCLFTLLG-----HLDYIRTTFFHHEYPWILSASDDQTIR 429
P+ S D +++W +T H +R+ + + +AS D T
Sbjct: 40 PILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTG 99
Query: 430 IW-NWQSR-QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
IW N+ S +CIS L GH + V ++ + L + S D+SV +W+
Sbjct: 100 IWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWE 146
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTL-LEKFDEHDGPVRGICFHIQQPLFVSGGDDY 294
+ F + LA+ + ++D + F H V +C+ L S +D
Sbjct: 638 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED- 696
Query: 295 KIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTG 474
+K+W+ C+ L + + FH YP +L Q I +WN +C++V G
Sbjct: 697 AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AG 755
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
H + P+ ++ SAS D+SV++W
Sbjct: 756 HECVISALAQSPSTGVVASASHDKSVKIW 784
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 429
F L S G D K+ +WN + + T H I F + ++S D+TI+
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 575
Query: 430 IWNWQS-RQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWDFS 570
IW+ + ++GH VM FHP + +LL S + +R WD +
Sbjct: 576 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 624
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 376 FHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVR 555
F ++ + SA D+ + IWN ++ Q S H H + +F P L ++S D++++
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 575
Query: 556 VWDFS--GLRKKSVAPGPAGLTEHLRNPQATDLFGQADA 666
+WD S G ++++ A + +P+ T+L D+
Sbjct: 576 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDS 614
Score = 43.6 bits (98), Expect = 1e-04
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 4/166 (2%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRM-CTLLEKFDEHDGPVRGICF 252
L+ +A V I FH K+ +L S N I+ WD C K G + F
Sbjct: 586 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK-----GASTQVRF 640
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIR 429
+ F++ + + +++ + + GH + + + + S S+D ++
Sbjct: 641 QPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVK 699
Query: 430 IWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWD 564
+W+ S CI L+ + FHP+ DLLV Q++ +W+
Sbjct: 700 LWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWN 744
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +1
Query: 145 VLASL-HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
+LAS H+ + +W+ + +EH + + F + D IK+W+
Sbjct: 522 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 581
Query: 322 -RRCLFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWNWQSRQCISVLTGHNHYVMC 495
L T+ GH + + FH + +L + D + IR W+ + C+ + G + V
Sbjct: 582 PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQV-- 638
Query: 496 AQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
+F P ++A+ + +V ++D K+
Sbjct: 639 -RFQPRTGQFLAAASENTVSIFDIENNNKR 667
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHLR-NPQATDL 648
V+C F LL SA D+ V +W+ L+ +S A + +R P +T L
Sbjct: 511 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQL 565
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTL-LEKFDEHDGPVRGICFHIQQPLFVSGGDDY 294
+ F + LA+ + ++D + F H V +C+ L S +D
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED- 698
Query: 295 KIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTG 474
+K+W+ C+ L + + FH YP +L Q I +WN +C++V G
Sbjct: 699 AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AG 757
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
H + P+ ++ SAS D+SV++W
Sbjct: 758 HECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 429
F L S G D K+ +WN + + T H I F + ++S D+TI+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 430 IWNWQS-RQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWDFS 570
IW+ + ++GH VM FHP + +LL S + +R WD +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 376 FHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVR 555
F ++ + SA D+ + IWN ++ Q S H H + +F P L ++S D++++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 556 VWDFS--GLRKKSVAPGPAGLTEHLRNPQATDLFGQADA 666
+WD S G ++++ A + +P+ T+L D+
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDS 616
Score = 43.6 bits (98), Expect = 1e-04
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 4/166 (2%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRM-CTLLEKFDEHDGPVRGICF 252
L+ +A V I FH K+ +L S N I+ WD C K G + F
Sbjct: 588 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK-----GASTQVRF 642
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIR 429
+ F++ + + +++ + + GH + + + + S S+D ++
Sbjct: 643 QPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVK 701
Query: 430 IWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWD 564
+W+ S CI L+ + FHP+ DLLV Q++ +W+
Sbjct: 702 LWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWN 746
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +1
Query: 145 VLASL-HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
+LAS H+ + +W+ + +EH + + F + D IK+W+
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 322 -RRCLFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWNWQSRQCISVLTGHNHYVMC 495
L T+ GH + + FH + +L + D + IR W+ + C+ + G + V
Sbjct: 584 PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQV-- 640
Query: 496 AQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
+F P ++A+ + +V ++D K+
Sbjct: 641 -RFQPRTGQFLAAASENTVSIFDIENNNKR 669
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHLR-NPQATDL 648
V+C F LL SA D+ V +W+ L+ +S A + +R P +T L
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQL 567
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTL-LEKFDEHDGPVRGICFHIQQPLFVSGGDDY 294
+ F + LA+ + ++D + F H V +C+ L S +D
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED- 698
Query: 295 KIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTG 474
+K+W+ C+ L + + FH YP +L Q I +WN +C++V G
Sbjct: 699 AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AG 757
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
H + P+ ++ SAS D+SV++W
Sbjct: 758 HECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 429
F L S G D K+ +WN + + T H I F + ++S D+TI+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 430 IWNWQS-RQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWDFS 570
IW+ + ++GH VM FHP + +LL S + +R WD +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 376 FHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVR 555
F ++ + SA D+ + IWN ++ Q S H H + +F P L ++S D++++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 556 VWDFS--GLRKKSVAPGPAGLTEHLRNPQATDLFGQADA 666
+WD S G ++++ A + +P+ T+L D+
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDS 616
Score = 43.6 bits (98), Expect = 1e-04
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 4/166 (2%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRM-CTLLEKFDEHDGPVRGICF 252
L+ +A V I FH K+ +L S N I+ WD C K G + F
Sbjct: 588 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK-----GASTQVRF 642
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIR 429
+ F++ + + +++ + + GH + + + + S S+D ++
Sbjct: 643 QPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVK 701
Query: 430 IWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWD 564
+W+ S CI L+ + FHP+ DLLV Q++ +W+
Sbjct: 702 LWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWN 746
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +1
Query: 145 VLASL-HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
+LAS H+ + +W+ + +EH + + F + D IK+W+
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 322 -RRCLFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWNWQSRQCISVLTGHNHYVMC 495
L T+ GH + + FH + +L + D + IR W+ + C+ + G + V
Sbjct: 584 PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQV-- 640
Query: 496 AQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
+F P ++A+ + +V ++D K+
Sbjct: 641 -RFQPRTGQFLAAASENTVSIFDIENNNKR 669
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHLR-NPQATDL 648
V+C F LL SA D+ V +W+ L+ +S A + +R P +T L
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQL 567
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTL-LEKFDEHDGPVRGICFHIQQPLFVSGGDDY 294
+ F + LA+ + ++D + F H V +C+ L S +D
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED- 698
Query: 295 KIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTG 474
+K+W+ C+ L + + FH YP +L Q I +WN +C++V G
Sbjct: 699 AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AG 757
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
H + P+ ++ SAS D+SV++W
Sbjct: 758 HECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 429
F L S G D K+ +WN + + T H I F + ++S D+TI+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 430 IWNWQS-RQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWDFS 570
IW+ + ++GH VM FHP + +LL S + +R WD +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 376 FHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVR 555
F ++ + SA D+ + IWN ++ Q S H H + +F P L ++S D++++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 556 VWDFS--GLRKKSVAPGPAGLTEHLRNPQATDLFGQADA 666
+WD S G ++++ A + +P+ T+L D+
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDS 616
Score = 43.6 bits (98), Expect = 1e-04
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 4/166 (2%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRM-CTLLEKFDEHDGPVRGICF 252
L+ +A V I FH K+ +L S N I+ WD C K G + F
Sbjct: 588 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK-----GASTQVRF 642
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIR 429
+ F++ + + +++ + + GH + + + + S S+D ++
Sbjct: 643 QPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVK 701
Query: 430 IWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWD 564
+W+ S CI L+ + FHP+ DLLV Q++ +W+
Sbjct: 702 LWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWN 746
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +1
Query: 145 VLASL-HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
+LAS H+ + +W+ + +EH + + F + D IK+W+
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 322 -RRCLFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWNWQSRQCISVLTGHNHYVMC 495
L T+ GH + + FH + +L + D + IR W+ + C+ + G + V
Sbjct: 584 PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQV-- 640
Query: 496 AQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
+F P ++A+ + +V ++D K+
Sbjct: 641 -RFQPRTGQFLAAASENTVSIFDIENNNKR 669
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHLR-NPQATDL 648
V+C F LL SA D+ V +W+ L+ +S A + +R P +T L
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQL 567
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTL-LEKFDEHDGPVRGICFHIQQPLFVSGGDDY 294
+ F + LA+ + ++D + F H V +C+ L S +D
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED- 698
Query: 295 KIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTG 474
+K+W+ C+ L + + FH YP +L Q I +WN +C++V G
Sbjct: 699 AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AG 757
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
H + P+ ++ SAS D+SV++W
Sbjct: 758 HECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 429
F L S G D K+ +WN + + T H I F + ++S D+TI+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 430 IWNWQS-RQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWDFS 570
IW+ + ++GH VM FHP + +LL S + +R WD +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN 626
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 376 FHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVR 555
F ++ + SA D+ + IWN ++ Q S H H + +F P L ++S D++++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 556 VWDFS--GLRKKSVAPGPAGLTEHLRNPQATDLFGQADA 666
+WD S G ++++ A + +P+ T+L D+
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDS 616
Score = 43.6 bits (98), Expect = 1e-04
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 4/166 (2%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLH-NGVIQLWDYRM-CTLLEKFDEHDGPVRGICF 252
L+ +A V I FH K+ +L S N I+ WD C K G + F
Sbjct: 588 LRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK-----GASTQVRF 642
Query: 253 HIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIR 429
+ F++ + + +++ + + GH + + + + S S+D ++
Sbjct: 643 QPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVK 701
Query: 430 IWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWD 564
+W+ S CI L+ + FHP+ DLLV Q++ +W+
Sbjct: 702 LWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWN 746
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +1
Query: 145 VLASL-HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
+LAS H+ + +W+ + +EH + + F + D IK+W+
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 322 -RRCLFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWNWQSRQCISVLTGHNHYVMC 495
L T+ GH + + FH + +L + D + IR W+ + C+ + G + V
Sbjct: 584 PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQV-- 640
Query: 496 AQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
+F P ++A+ + +V ++D K+
Sbjct: 641 -RFQPRTGQFLAAASENTVSIFDIENNNKR 669
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHLR-NPQATDL 648
V+C F LL SA D+ V +W+ L+ +S A + +R P +T L
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQL 567
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/140 (22%), Positives = 64/140 (45%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQR 324
VL + H+G +++WD R + + + + + + G D +W+ +
Sbjct: 953 VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSG 1012
Query: 325 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQF 504
+ + L GH +IR+ + +++ SDD T R+W+ C +VL H V ++
Sbjct: 1013 KQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEY 1070
Query: 505 HPTEDLLVSASLDQSVRVWD 564
P + +++ S D +R W+
Sbjct: 1071 SPFDKGIITGSADGLLRFWE 1090
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 271 FVSGGDDYKIKVWNYKQR--RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 444
F+SG D +K+W+ R TL GH +R + I+S SDD ++ +W+ Q
Sbjct: 870 FISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRA--ISSDRGKIVSGSDDLSVIVWDKQ 927
Query: 445 SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ Q + L GH+ V C + E +L +A D +V++WD
Sbjct: 928 TTQLLEELKGHDSQVSCVKMLSGERVLTAAH-DGTVKMWD 966
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Frame = +1
Query: 169 VIQLWD--YRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTL 342
++++WD R L H G VR I + VSG DD + VW+ + + L L
Sbjct: 878 LVKIWDPSLRGSELRATLKGHTGTVRAISS--DRGKIVSGSDDLSVIVWDKQTTQLLEEL 935
Query: 343 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDL 522
GH + +L+A+ D T+++W+ ++ C++ + + ++ ++ + +
Sbjct: 936 KGHDSQVSCVKMLSGER-VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGI 994
Query: 523 LVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHLRNPQATDLFGQAD 663
L +A D +WD ++ G +R + T + G D
Sbjct: 995 LAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDTLITGSDD 1041
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 62.5 bits (145), Expect = 2e-10
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL-FVSGG 285
V + F + A +GV+Q++D + L H P R + + +Q L VSGG
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 286 DDYKIKVWNYKQRRCLFTLLGHLDYIRT-TFFHHEYPWILSASDDQTIRIWNWQSRQCIS 462
DD +K W+ + LLGH DY+R +++ S D T+++W+ +
Sbjct: 156 DDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW 215
Query: 463 VL-TGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
+ H V + P+ L+ +A SV+VWD G
Sbjct: 216 IAEINHGLPVEDVVYLPSGGLIATAG-GNSVKVWDLIG 252
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 62.5 bits (145), Expect = 2e-10
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 5/169 (2%)
Frame = +1
Query: 115 GISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDY 294
G H + P +L++ H + ++K H V F ++G DD
Sbjct: 268 GFRKHHRAPSILSACHAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDR 327
Query: 295 KIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTG 474
+K+W+ + CL + GH I + SAS+D IR+W ISVL G
Sbjct: 328 LVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRG 387
Query: 475 HNHYVMCAQFHPTED---LLVSASLDQSVRVWD--FSGLRKKSVAPGPA 606
H V F P + L+S+S D + R+WD +S + P P+
Sbjct: 388 HTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPS 436
Score = 53.6 bits (123), Expect = 1e-07
Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 18/182 (9%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI 258
+KK V F +V+ + ++++W L H+G + +
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 357
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYP---WILSASDDQTIR 429
L S +D+ I+VW + L GH + F +LS+SDD T R
Sbjct: 358 NNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCR 417
Query: 430 IWN-----WQSRQCI----SVLTG------HNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
IW+ W R + TG +H ++C ++ + V+ S D + RVW
Sbjct: 418 IWDARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVWS 477
Query: 565 FS 570
S
Sbjct: 478 AS 479
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED 519
L GH + + F ++++ SDD+ ++IW+ ++ C++ GH +
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 520 LLVSASLDQSVRVWDFSGLRKKSVAPGPAG 609
L+ SAS D +RVW SV G G
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTG 390
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP-TEDLLVSASLDQSVRVWD 564
++L+A D I +WN + LTGH+ HP + +SA D +WD
Sbjct: 611 FVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWD 668
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 62.1 bits (144), Expect = 3e-10
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYR--MCTLLEKFDEHDGPVRGICFHIQQPLFVSG 282
V + H + +++ NG I++WD R +C+ E E P+R + + V+
Sbjct: 128 VNTVVLHPNQTELISGDQNGNIRVWDLRADLCSC-ELVPEVGTPIRSLTVMWDGTMVVAA 186
Query: 283 GDDYKIKVWNYKQRRCLFT-------LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 441
D VW R T L H +I ++ +AS D+T++IWN
Sbjct: 187 NDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNL 246
Query: 442 QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSV 591
+ VLTGH +V F + LV+AS D + R+W +++ V
Sbjct: 247 DGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMV 296
Score = 61.3 bits (142), Expect = 6e-10
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI 258
++ F + + V + F + + +G +++WD R+ +F PV + H
Sbjct: 77 VRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREF-RSVSPVNTVVLHP 135
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDY-IRTTFFHHEYPWILSASDDQTIRIW 435
Q +SG + I+VW+ + C L+ + IR+ + +++A+D T +W
Sbjct: 136 NQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVW 195
Query: 436 -NWQSRQCISV------LTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVA 594
+ RQ ++ L HN +++ P L +AS D++V++W+ G + + V
Sbjct: 196 RSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVL 255
Query: 595 PG 600
G
Sbjct: 256 TG 257
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/99 (21%), Positives = 39/99 (39%)
Frame = +1
Query: 160 HNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFT 339
H + L Y + F H V + F + SG +D +K+W+ + R C
Sbjct: 62 HIRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQRE 121
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC 456
+ + T H ++S + IR+W+ ++ C
Sbjct: 122 FRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDLRADLC 159
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/97 (20%), Positives = 39/97 (40%)
Frame = +1
Query: 205 LEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH 384
L K H+ + + D +K+WN + L GH ++ F
Sbjct: 210 LHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSM 269
Query: 385 EYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMC 495
+ ++++AS D T R+W+ ++ + V H +C
Sbjct: 270 DGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
++ +AS DQTIR+W ++ +C + +V + P + LV A+ + +R++D
Sbjct: 12 YLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLV-AACNPHIRLFD 67
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 337 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTE 516
+ +GHLD + + +LS+S D+T+R+W+ S+ C+ V + H+ YV C QF+P +
Sbjct: 463 SFVGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWDLSSKTCLKVFS-HSDYVTCIQFNPVD 520
Query: 517 D-LLVSASLDQSVRVW 561
D +S SLD VR+W
Sbjct: 521 DNYFISGSLDAKVRIW 536
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 130 AKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH-IQQPLFVSGGDDYKIKV 306
+K +L+S + ++LWD T L+ F H V I F+ + F+SG D K+++
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSSKTCLKVFS-HSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 307 WN 312
W+
Sbjct: 536 WS 537
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 445 SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
S + + GH V+ + ++ LL S+S+D++VR+WD S
Sbjct: 457 SEKPVCSFVGHLDDVLDLSWSKSQHLL-SSSMDKTVRLWDLS 497
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED-LLVSASLDQSVRVW 561
+LS+S D+T+R+WN S+ C+ V + H+ YV C QF+P +D +S SLD VRVW
Sbjct: 527 LLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDRYFISGSLDAKVRVW 581
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 130 AKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH-IQQPLFVSGGDDYKIKV 306
+K +L+S + ++LW+ T L+ F H V I F+ + F+SG D K++V
Sbjct: 522 SKSQHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDRYFISGSLDAKVRV 580
Query: 307 WNYKQRR 327
W+ R+
Sbjct: 581 WSIPDRQ 587
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 61.7 bits (143), Expect = 4e-10
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Frame = +1
Query: 166 GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL 345
G + +WD+R T + K H V + + L +G DD K+KVWN C T
Sbjct: 329 GQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFT 388
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-RQCISVLTGHNHYVMCAQFHPTEDL 522
H + + F + +LSAS D T+R W+++ + + T + P+ D+
Sbjct: 389 EHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDV 448
Query: 523 LVSASLDQ-SVRVWDFSGLRKKSVAPG 600
+ + +LD + VW + K + G
Sbjct: 449 VCAGTLDSFEIFVWSKKTGQIKDILSG 475
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPV-RGICFHIQQ 264
F + V + F A +L++ +G ++ WD++ + + + P R
Sbjct: 387 FTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKR---YKNYKTYTTPTPRQFVSLTAD 443
Query: 265 PL--FVSGG--DDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
P V G D ++I VW+ K + L GH + F + S+S D T+R+
Sbjct: 444 PSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRL 503
Query: 433 WN-WQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
W+ + S+ + HNH V+ F P L S++LD + WD
Sbjct: 504 WDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWD 547
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCL--FTLL 345
+++W+ T F EH V + F +S D ++ W++K+ + +T
Sbjct: 373 VKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTP 432
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
++ T D I +W+ ++ Q +L+GH V F P LL
Sbjct: 433 TPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLL 492
Query: 526 VSASLDQSVRVWD 564
S+S D +VR+WD
Sbjct: 493 ASSSWDYTVRLWD 505
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 61.7 bits (143), Expect = 4e-10
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Frame = +1
Query: 166 GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL 345
G + +WD+R T + K H V + + L +G DD K+KVWN C T
Sbjct: 369 GQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFT 428
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-RQCISVLTGHNHYVMCAQFHPTEDL 522
H + + F + +LSAS D T+R W+++ + + T + P+ D+
Sbjct: 429 EHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDV 488
Query: 523 LVSASLDQ-SVRVWDFSGLRKKSVAPG 600
+ + +LD + VW + K + G
Sbjct: 489 VCAGTLDSFEIFVWSKKTGQIKDILSG 515
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPV-RGICFHIQQ 264
F + V + F A +L++ +G ++ WD++ + + + P R
Sbjct: 427 FTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKR---YKNYKTYTTPTPRQFVSLTAD 483
Query: 265 PL--FVSGG--DDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 432
P V G D ++I VW+ K + L GH + F + S+S D T+R+
Sbjct: 484 PSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRL 543
Query: 433 WN-WQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
W+ + S+ + HNH V+ F P L S++LD + WD
Sbjct: 544 WDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWD 587
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCL--FTLL 345
+++W+ T F EH V + F +S D ++ W++K+ + +T
Sbjct: 413 VKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTP 472
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
++ T D I +W+ ++ Q +L+GH V F P LL
Sbjct: 473 TPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLL 532
Query: 526 VSASLDQSVRVWD 564
S+S D +VR+WD
Sbjct: 533 ASSSWDYTVRLWD 545
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +1
Query: 337 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPT- 513
+L GHLD I + +LS+S D+T+R+W+ +++ C+ L HN YV C QF P
Sbjct: 501 SLKGHLDAILDLSWSKSQ-LLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVD 558
Query: 514 EDLLVSASLDQSVRVW 561
E+ +S SLD +R+W
Sbjct: 559 ENYFLSGSLDAKIRIW 574
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 466 LTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
L GH ++ + ++ LL+S+S+D++VR+WD
Sbjct: 502 LKGHLDAILDLSWSKSQ-LLLSSSMDKTVRLWD 533
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQP-LFVSGGDDYKIKVWNYKQ 321
+ +S + G++ +WD L +++EH+ + F +P + VSG DD K+KVW +Q
Sbjct: 436 IASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQ 495
Query: 322 RRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-RQCISVLTGHNHYVMCA 498
+ + + + +I S D I ++ ++ Q + V +GH V
Sbjct: 496 EASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYV 555
Query: 499 QFHPTEDLLVSASLDQSVRVWD 564
+F + L SAS D ++R+WD
Sbjct: 556 KFLSNNE-LASASTDSTLRLWD 576
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 382 HEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRV 558
HE I S+ + + +W+ +RQ + H F TE +LVS S D V+V
Sbjct: 431 HEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKV 490
Query: 559 W 561
W
Sbjct: 491 W 491
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP-TEDLLVSASLDQSVRVWDFS 570
++LSAS D+T+R+W S C+ V HN YV QF+P E+ +S S+D VR+W+ S
Sbjct: 341 YLLSASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNIS 399
Query: 571 G 573
G
Sbjct: 400 G 400
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 59.3 bits (137), Expect = 2e-09
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Frame = +1
Query: 202 LLEKFDEHDGPVRGICFHIQQP-LFVSGGDDYKIKVWN-YKQRRCLFTLLGHLDYIRTTF 375
L+ + H V I F +Q L +S G D K+K+W+ Y +C+ T +GH +R
Sbjct: 274 LVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDIC 333
Query: 376 FHHEYPWILSASDDQTIRIWNWQSRQCISVL-TGHNHYVMCAQFHPTED---LLVSASLD 543
F ++ L+A D+ I+ W+ ++ Q IS TG YV+ + +P +D +L++ D
Sbjct: 334 FSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVV--KLNPDDDKQNILLAGMSD 391
Query: 544 QSVRVWDFS 570
+ + WD +
Sbjct: 392 KKIVQWDIN 400
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 6/155 (3%)
Frame = +1
Query: 133 KRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWN 312
K+ +LA + + I WD + +++D+H G V I F FV+ DD ++VW
Sbjct: 381 KQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
Query: 313 YKQRRCL-FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISV---LTGH- 477
+ + + H+ + + H W+ + S D I I++ + R ++ GH
Sbjct: 441 FGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 500
Query: 478 -NHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLR 579
Y F P ++S + WD+ +
Sbjct: 501 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 535
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/171 (18%), Positives = 73/171 (42%), Gaps = 7/171 (4%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDE-HDGPVRGIC 249
++ ++++ V I+F + S + +++W++ + +++ E H + I
Sbjct: 403 EVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS 462
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFT---LLGHL--DYIRTTFFHHEYPWILSASD 414
H + D +I +++ ++R L GH+ Y F + +++S
Sbjct: 463 VHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 522
Query: 415 DQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLV-SASLDQSVRVWD 564
+ W+W+S + L HN + A++HP E V + D ++ WD
Sbjct: 523 EGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 58.4 bits (135), Expect = 4e-09
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQ 453
++G DD +KVW+ CL + GH I +I SAS+D IR+W
Sbjct: 261 ITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGL 320
Query: 454 CISVLTGHNHYVMCAQFHP---TEDLLVSASLDQSVRVWDFSG 573
+SVL GH V F P + L+S+S D + R+WD G
Sbjct: 321 PVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARG 363
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED 519
L GH + + ++++ SDD+ +++W+ + C++ GH +
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 520 LLVSASLDQSVRVWDFSGLRKKSVAPGPAG 609
+ SAS D +RVW SV G G
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTG 330
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +1
Query: 142 WVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
+V+ + ++++W L H+G + + S +D I+VW
Sbjct: 259 YVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPD 318
Query: 322 RRCLFTLLGHLDYIRTTFFHHE--YPW-ILSASDDQTIRIWNWQSRQ 453
+ L GH + F P+ +LS+SDD T RIW+ + Q
Sbjct: 319 GLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQ 365
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP-TEDLLVSASLDQSVRVWD 564
++L+A D I +WN + LTGH HP + +SA D VWD
Sbjct: 558 FVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAGYDGKTIVWD 615
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 442 QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
Q Q I L GH + V CA + +++ S D+ V+VW
Sbjct: 233 QKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVW 272
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 58.4 bits (135), Expect = 4e-09
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Frame = +1
Query: 79 LKKFETKSARVKGISFH-AKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH 255
++ F+ + V+ + ++ +R L S + ++LW + F EH V ++
Sbjct: 99 IRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWN 158
Query: 256 IQQ-PLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIR 429
+ +F S D +++W+ ++ + H I + ++ IL+ S D+T++
Sbjct: 159 PKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVK 218
Query: 430 IWNWQS-RQCISVLTGHNHYVMCAQFHP-TEDLLVSASLDQSVRVWDF 567
+W+ +S R ++VL GH + V +F P L+ S S D SV +WD+
Sbjct: 219 VWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDY 266
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/151 (20%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRM---CTLLEKFDEHDGPVRGICFH-IQQPLFVSGGDDYKIKVWN 312
++A++ +G ++++D + + F EH V+ + ++ ++ F++ D +K+W
Sbjct: 76 LIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWA 135
Query: 313 YKQRRCLFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRQCISVLTGHNHYV 489
+ + T H + ++ ++ + SAS D T+RIW+ + ++ H+ +
Sbjct: 136 MDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEI 195
Query: 490 MCAQFHPTED-LLVSASLDQSVRVWDFSGLR 579
+ ++ +D +L ++S+D++V+VWD R
Sbjct: 196 LSCDWNKYDDCILATSSVDKTVKVWDVRSYR 226
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 385 EYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED-LLVSASLDQSVRVW 561
E ++LS+S D+T+R+W +C+ T HN++V C F+P +D +S S+D VR+W
Sbjct: 332 EKGYLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
Query: 562 DFSGLR 579
D + R
Sbjct: 391 DVTRCR 396
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K L +F+ + +S+ +++ ++L+S + ++LW L F H+ V + F
Sbjct: 313 KPLHEFKGHIGEILDLSW-SEKGYLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAF 370
Query: 253 H-IQQPLFVSGGDDYKIKVWNYKQRR 327
+ + F+SG D K+++W+ + R
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCR 396
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 193 MCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWN 312
MC + ++F HDG + + F S G+D ++VW+
Sbjct: 208 MC-IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWS 246
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 385 EYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED-LLVSASLDQSVRVW 561
E ++LS+S D+T+R+W +C+ T HN++V C F+P +D +S S+D VR+W
Sbjct: 332 EKGYLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
Query: 562 DFSGLR 579
D + R
Sbjct: 391 DVTRCR 396
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K L +F+ + +S+ +++ ++L+S + ++LW L F H+ V + F
Sbjct: 313 KPLHEFKGHIGEILDLSW-SEKGYLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAF 370
Query: 253 H-IQQPLFVSGGDDYKIKVWNYKQRR 327
+ + F+SG D K+++W+ + R
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCR 396
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 193 MCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWN 312
MC + ++F HDG + + F S G+D ++VW+
Sbjct: 208 MC-IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWS 246
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 57.6 bits (133), Expect = 7e-09
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 9/154 (5%)
Frame = +1
Query: 214 FDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYP 393
F H G V + + L S DD K+WN KQ + L H I T + P
Sbjct: 444 FTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGP 503
Query: 394 W---------ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQ 546
+ SAS D T+++W+ + + + GH V F P + + S SLD+
Sbjct: 504 GTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDK 563
Query: 547 SVRVWDFSGLRKKSVAPGPAGLTEHLRNPQATDL 648
S+ +W + G G+ E N + +
Sbjct: 564 SIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKI 597
Score = 48.4 bits (110), Expect = 4e-06
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYK 297
+ ++ K ++L + +WD + ++F+ H GP + + F + D
Sbjct: 371 LKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSM 429
Query: 298 IKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGH 477
I + + R T GH + + + S SDD T +IWN + + L H
Sbjct: 430 IYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREH 489
Query: 478 NHYVMCAQFHPT---------EDLLVSASLDQSVRVWD 564
+ ++ PT + L SAS D +V++WD
Sbjct: 490 TKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD 527
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/160 (20%), Positives = 63/160 (39%)
Frame = +1
Query: 85 KFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQ 264
K KS V + ++ + + +G ++W L+ +H GP+ + ++ +
Sbjct: 319 KSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNG-ELISTLSKHKGPIFSLKWNKKG 377
Query: 265 PLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 444
++G D VW+ K H + + + S++D +
Sbjct: 378 DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGE 437
Query: 445 SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+R TGH V C ++ PT LL S S D + ++W+
Sbjct: 438 TRPA-KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWN 476
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 457 ISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPG 600
+ +L GH V + P+ LL S S D + R+W K+V G
Sbjct: 258 VRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTG 305
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 385 EYPWILSASDDQTIRIWN-WQSRQCISVLTGHNHYVMCAQFHPTED-LLVSASLDQSVRV 558
E ++LS+S D+T+R+W S +CI V + H +V C F+P +D +S S+D VR+
Sbjct: 373 EKGFLLSSSVDETVRLWRVGSSDECIRVFS-HKSFVTCVAFNPVDDNYFISGSIDGKVRI 431
Query: 559 WDFSGLR 579
WD S R
Sbjct: 432 WDVSQFR 438
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 85 KFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH-IQ 261
+F + + +S+ +++ ++L+S + ++LW + H V + F+ +
Sbjct: 358 EFRGHTGEILDLSW-SEKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVD 416
Query: 262 QPLFVSGGDDYKIKVWNYKQRR 327
F+SG D K+++W+ Q R
Sbjct: 417 DNYFISGSIDGKVRIWDVSQFR 438
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 208 EKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWN 312
++F HDG + + F S G+D ++VWN
Sbjct: 251 QEFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWN 285
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Frame = +1
Query: 103 ARVKGISFHAK-RPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQP-LFV 276
+++ GI +++ + V +S GV+Q+WD L+ + EH+ V I + P L
Sbjct: 534 SKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLA 593
Query: 277 SGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC 456
SG DD +K+W+ Q + T+ + F + S D + ++ ++ +
Sbjct: 594 SGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKL 653
Query: 457 -ISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
+ + GH+ V +F LVS+S D ++++WD S
Sbjct: 654 PLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWDLS 691
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Frame = +1
Query: 103 ARVKGISFHAK-RPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQP-LFV 276
+++ GI +++ + V +S GV+Q+WD L+ + EH+ V I + P L
Sbjct: 534 SKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLA 593
Query: 277 SGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC 456
SG DD +K+W+ Q + T+ + F + S D + ++ ++ +
Sbjct: 594 SGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKL 653
Query: 457 -ISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
+ + GH+ V +F LVS+S D ++++WD S
Sbjct: 654 PLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWDLS 691
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +1
Query: 199 TLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFF 378
T + H+G I F +GG D +K+W+ + +L G L I
Sbjct: 222 TCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAV 281
Query: 379 HHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP-TEDLLVSASLDQSVR 555
H+ +++A+ + +W+ S + LTGH V + +VSA+ D++++
Sbjct: 282 THDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIK 341
Query: 556 VWD 564
+WD
Sbjct: 342 LWD 344
Score = 40.7 bits (91), Expect = 9e-04
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRM--CTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK 318
V+++ ++ I+LWD CT F + IC I SG D +++W+ +
Sbjct: 331 VVSAAYDRTIKLWDLHKGYCTNTVLFTSN---CNAICLSIDGLTVFSGHMDGNLRLWDIQ 387
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMC- 495
+ L + GH + + IL++ D +++ ++ + L + +
Sbjct: 388 TGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASN 447
Query: 496 ---AQFHPTEDLLVSASLDQSVRVWDFS 570
+ P +D + + S D SV VW S
Sbjct: 448 WSRSCISPDDDYVAAGSADGSVHVWSLS 475
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/137 (17%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTL 342
+G ++LWD + LL + H V + ++ G D V++ + TL
Sbjct: 378 DGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTL 437
Query: 343 LGHLDYIRTTFFHH----EYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP 510
+ + + + + ++ + S D ++ +W+ +S+L ++C +
Sbjct: 438 RASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSG 497
Query: 511 TEDLLVSASLDQSVRVW 561
L SA + V W
Sbjct: 498 IGKPLASADKNGYVCTW 514
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTL 342
+GV+Q++D TL D + + +H + + ++G +D + +WN + L
Sbjct: 134 DGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMF 193
Query: 343 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHY---VMCAQFHPT 513
GH + F + I + SDD ++ +WN ++ + I ++ GH ++ + C +
Sbjct: 194 SGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSN 253
Query: 514 EDLLVSASLDQSVRV 558
L +S S D SV +
Sbjct: 254 SSLAISGSKDGSVHI 268
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 6/177 (3%)
Frame = +1
Query: 103 ARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSG 282
A ++ + +H + VLA + + +W+ L F H+ V F L +G
Sbjct: 156 AGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTG 215
Query: 283 GDDYKIKVWNYKQRRCLFTLLG---HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQ 453
DD + VWN K + + G H + + + +S S D ++ I N + +
Sbjct: 216 SDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGK 275
Query: 454 CISVLTGHNHYVMCAQFHP---TEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLT 615
+S L H V C +F P T L + +D+ + +WD + + G+T
Sbjct: 276 VVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEGVT 332
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/114 (26%), Positives = 51/114 (44%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H V + F L SGG D +++++ L G I +H +L
Sbjct: 112 HKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVL 171
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ S+D ++ +WN +++ +GHN V C F P L+ + S D S+ VW+
Sbjct: 172 AGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWN 225
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/107 (23%), Positives = 48/107 (44%)
Frame = +1
Query: 265 PLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 444
PL +GG D K+ +W+ + F + H + + + + ++ + + T+ IW+
Sbjct: 300 PLAATGGMDKKLIIWDLQHSTPRF-ICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSL 358
Query: 445 SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
C+ GH V D +VS S+D + RV++ S + K
Sbjct: 359 LGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQNK 405
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +1
Query: 214 FDEHDGPVRGI-CFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEY 390
F H G + + C L +GG D K +W L GH D + F ++
Sbjct: 66 FTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDG 125
Query: 391 PWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ S D ++I++ S VL G + ++HP ++++ S D S+ +W+
Sbjct: 126 QLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWN 183
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/77 (28%), Positives = 31/77 (40%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGL 576
+ + D +W + + L GH V C F LL S LD V+++D S
Sbjct: 86 VATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSG 145
Query: 577 RKKSVAPGPAGLTEHLR 627
K V GP E +R
Sbjct: 146 TLKCVLDGPGAGIEWVR 162
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/86 (22%), Positives = 36/86 (41%)
Frame = +1
Query: 178 LWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLD 357
+WD + T EH+ V + + +G + + +W+ C+ T GH D
Sbjct: 313 IWDLQHSTP-RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQD 371
Query: 358 YIRTTFFHHEYPWILSASDDQTIRIW 435
++ +I+S S D T R++
Sbjct: 372 AVQAISVSTNTDFIVSVSVDNTARVF 397
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 54.4 bits (125), Expect = 7e-08
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Frame = +1
Query: 97 KSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFV 276
++ +V I+ W+++ + VI L+D R T+ E+ E + + +
Sbjct: 402 RTQKVSDIAMTDDGKWLVSVCKDSVISLFD-REATV-ERLIEEEDMITSFSLSNDNKYIL 459
Query: 277 SGGDDYKIKVWNYK-QRRCLFTLLGHLD---YIRTTFFHHEYPWILSASDDQTIRIWNWQ 444
+ +I++WN + + + GH IR+ F ++ +I S S+D + IW+
Sbjct: 460 VNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRS 519
Query: 445 SRQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWDFSGLRKKS 588
+ + I L GH V C + PT +L SAS D ++R+W + +++
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQQN 568
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISV---LTGHNHYVMCAQFHP 510
L H D + F H ++ S+S DQT IW + IS+ L GH+ V+ + P
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 511 TEDLLVSASLDQSVRVWD 564
+ +++ ++ +R WD
Sbjct: 330 DDRQVLTCGAEEVIRRWD 347
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/83 (20%), Positives = 38/83 (45%)
Frame = +1
Query: 337 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTE 516
TL+GH + + + +L+ ++ IR W+ S C+ + + ++P
Sbjct: 314 TLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDG 373
Query: 517 DLLVSASLDQSVRVWDFSGLRKK 585
+++ D+S+ +WD G K+
Sbjct: 374 QGIIAGMTDRSICMWDLDGREKE 396
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 451 QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
Q +L H V QF L S+S DQ+ +W+ S
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEIS 304
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 54.0 bits (124), Expect = 9e-08
Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
Frame = +1
Query: 82 KKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQ 261
K+ V G++ + ++++ ++G +++WD++ L ++D V+ I +H
Sbjct: 468 KRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVK-IVYHRV 526
Query: 262 QPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN- 438
L + DD+ I++++ + + GH D I F + W++S+S D ++RIW+
Sbjct: 527 NGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDV 586
Query: 439 WQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQS-VRVW 561
++Q V + + P D+L +A DQ+ V +W
Sbjct: 587 ILAKQIDGVHV--DVPITALSLSPNMDVLATAHSDQNGVYLW 626
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/114 (24%), Positives = 53/114 (46%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
HDG V G+ L +S G +KVW++K+R ++ + H +
Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVY-HRVNGLLA 531
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ +DD IR+++ + + + GH + F ++S+S+D S+R+WD
Sbjct: 532 TVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWD 585
Score = 44.4 bits (100), Expect = 7e-05
Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 3/144 (2%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK-- 318
VL G +QLW+ +L +F V + G D KI V N K
Sbjct: 154 VLVGSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLD 213
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLT-GHNHYVMC 495
+ F +F P + S I IWN ++ SV+ H+ ++
Sbjct: 214 EEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIIS 273
Query: 496 AQFHPTEDLLVSASLDQSVRVWDF 567
F E +L+SAS D S+++W F
Sbjct: 274 LNFLANEPVLMSASADNSLKMWIF 297
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 70 IKMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWD 186
+KM+++F + R+ + F WV++S +G +++WD
Sbjct: 547 LKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWD 585
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWD 564
+L+AS DQTI++W+ + +C VL GH V HPT DLLVS S D +WD
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWN 438
++ D IKVW+ ++ +C L+GH +++ H ++S S D +W+
Sbjct: 144 LTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRC-LFTLLGH-LDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 447
+SG D +W + + L GH + + E + +ASDD T+R+WN ++
Sbjct: 354 LSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNIEN 413
Query: 448 RQC 456
C
Sbjct: 414 NIC 416
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 53.6 bits (123), Expect = 1e-07
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Frame = +1
Query: 139 PWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGI-CFHIQQPLFVSGGDDYKIKVWNY 315
PW+L + N +++ W+ + L +GPV + + L +G D I VW Y
Sbjct: 196 PWLLVGMPN-LVKAWNIQNNADLSL----NGPVGQVYSLVVGTDLLFAGTQDGSILVWRY 250
Query: 316 KQRRCLF----TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNH 483
F +LLGH + + + + S + D +I++W+ + QCI LT H
Sbjct: 251 NSTTSCFDPAASLLGHTLAVVSLYVGANR--LYSGAMDNSIKVWSLDNLQCIQTLTEHTS 308
Query: 484 YVMCAQFHPTEDLLVSASLDQSVRVW 561
VM + L+S SLD +V++W
Sbjct: 309 VVM--SLICWDQFLLSCSLDNTVKIW 332
Score = 33.1 bits (72), Expect = 0.17
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Frame = +1
Query: 199 TLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRC--LFTLLGHLDYIRTT 372
+LL + D H V GI + D +++W+ +C + L G + I +
Sbjct: 135 SLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCIIS- 193
Query: 373 FFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSV 552
E PW+L + ++ WN Q+ +S L G V DLL + + D S+
Sbjct: 194 ----EGPWLLVGMPN-LVKAWNIQNNADLS-LNGPVGQVY--SLVVGTDLLFAGTQDGSI 245
Query: 553 RVWDFS 570
VW ++
Sbjct: 246 LVWRYN 251
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 439 WQSRQCISVLT---GHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
W S+LT GH V D L +AS D++VR+WD
Sbjct: 128 WSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWD 172
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP-TEDLLVSASLDQSVRVWDFS 570
+LSAS D+T+R+W QC+ V HN+YV C +F+P ++ S S+D R+W S
Sbjct: 286 LLSASKDKTVRLWRTGCDQCLHVF-HHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLS 343
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Frame = +1
Query: 139 PWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGI-CFHIQQPLFVSGGDDYKIKVWNY 315
PW+L + N +++ W+ GPV + + L +G D I W Y
Sbjct: 203 PWLLVGMPN-LVKAWNIET----NADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWRY 257
Query: 316 KQRRCLF----TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNH 483
F +L GH + T + + S S D+TI++W+ + QCI LT H+
Sbjct: 258 NAATNCFEPSASLTGHTLAVVTLYVGANR--LYSGSMDKTIKVWSLDNLQCIQTLTDHSS 315
Query: 484 YVMCAQFHPTEDLLVSASLDQSVRVW 561
VM + L+S SLD +V++W
Sbjct: 316 VVM--SLICWDQFLLSCSLDNTVKIW 339
Score = 32.7 bits (71), Expect = 0.23
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 202 LLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRC--LFTLLGHLDYIRTTF 375
LL + D H+ V GI +G D ++VW+ +C + L G + + +
Sbjct: 143 LLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLS-- 200
Query: 376 FHHEYPWILSASDDQTIRIWNWQSR--QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQS 549
E PW+L + ++ WN ++ Q +S G + ++ DLL + + D S
Sbjct: 201 ---EGPWLLVGMPN-LVKAWNIETNADQSLSGPVGQVYSLVVG-----TDLLFAGTQDGS 251
Query: 550 VRVWDFS 570
+ W ++
Sbjct: 252 ILAWRYN 258
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 307 WNYKQRRCLFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
W+ + L T L GH + + + S D+T+R+W+ S QC VL
Sbjct: 135 WSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVL 189
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/125 (26%), Positives = 56/125 (44%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H+G V F+ ++ G D I++WN + + T H +R +
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFC 76
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
S D+ + W+ + + I GH+ V +F+ + ++VSA D+S+RVWD R
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD---CRS 133
Query: 583 KSVAP 597
SV P
Sbjct: 134 HSVEP 138
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 2/149 (1%)
Frame = +1
Query: 124 FHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIK 303
F+ + L + I+LW+ L++ + H VR + F S G D ++
Sbjct: 26 FNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVY 85
Query: 304 VWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR--QCISVLTGH 477
W+ R + GH + F+ ++SA D+++R+W+ +S + + ++
Sbjct: 86 YWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTF 145
Query: 478 NHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
VM TE ++ S+D +VR +D
Sbjct: 146 LDTVMSVVLTKTE--IIGGSVDGTVRTFD 172
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
++ S+D + W+ + +S H+ V +HP ED ++++S+D ++RVW
Sbjct: 243 VIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVW 309
V+ +G++ WD +L KF HD V + +H ++ ++ D I+VW
Sbjct: 243 VIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/77 (25%), Positives = 28/77 (36%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED 519
L GH + F+ + + L+ D+TIR+WN I H V
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 520 LLVSASLDQSVRVWDFS 570
S D+ V WD S
Sbjct: 74 KFCSCGGDRQVYYWDVS 90
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPV--RGICFHIQQPLFVSGGDDYKIKVWNYK 318
VLA + ++L D LL+ + H C + G +D + W+
Sbjct: 199 VLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLV 258
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
+ L H + + +H + +L++S D TIR+W
Sbjct: 259 DAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLW 183
K+L KF V +S+H K +L S +G I++W
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 361 IRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED-LLVSAS 537
IR+ F + +I S S+D + IWN ++ + + VL+GH+ V C ++P +L SAS
Sbjct: 446 IRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASAS 505
Query: 538 LDQSVRVW 561
DQ++R+W
Sbjct: 506 DDQTIRIW 513
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 247 CFH-IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL-SASDDQ 420
CF + SG +D ++ +WN K + L L GH + ++ + P +L SASDDQ
Sbjct: 449 CFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQ 508
Query: 421 TIRIW 435
TIRIW
Sbjct: 509 TIRIW 513
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 52.8 bits (121), Expect = 2e-07
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Frame = +1
Query: 184 DYRMCTLLEKFDEHDGPVRGICFHIQQPLFV-SGGDDYKIKVWNYKQRR--CLFTLLGHL 354
D++ +EK HD + I + + FV +G D KIKVWN K ++ + TL HL
Sbjct: 223 DFKCLDSIEK--AHDDAINAIV--VSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHL 278
Query: 355 DYIRTTFFHHEYPWILSASDDQTIRIW----NWQSRQ----CISVLTGHNHYVMCAQFHP 510
+ + + S + D++I +W N + + L GH +MC
Sbjct: 279 SAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAV-- 336
Query: 511 TEDLLVSASLDQSVRVWDFSGLRKK 585
DL++S S D+S+RVW GL +K
Sbjct: 337 ASDLVLSGSADKSLRVWR-RGLMEK 360
Score = 34.7 bits (76), Expect = 0.057
Identities = 23/103 (22%), Positives = 50/103 (48%)
Frame = +1
Query: 316 KQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMC 495
+ ++C T + H+D + + + + SAS D++ +IW +C+ + + +
Sbjct: 182 RHKKC--TWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAIN 239
Query: 496 AQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHL 624
A + + + S D+ ++VW+ +K S+ A LT+HL
Sbjct: 240 AIVVSKDGFVYTGSADKKIKVWNKKD-KKHSLV---ATLTKHL 278
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 13/69 (18%)
Frame = +1
Query: 397 ILSASDDQTIRIWNW-----QSRQCISVLTGHNHYVMCAQFHPTED--------LLVSAS 537
+LS S D+++R+W + C++VL GH V ++ ++ S S
Sbjct: 341 VLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSGS 400
Query: 538 LDQSVRVWD 564
LD S++VW+
Sbjct: 401 LDLSLKVWN 409
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWDFS 570
+LSAS D ++R+W C+ + + HN+YV QF+P +D +S S+D VR+W S
Sbjct: 370 LLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSAS 427
Score = 31.9 bits (69), Expect = 0.40
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K L +F S + IS+ + AS+ N V +LW L F H+ V + F
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNRLLSASVDNSV-RLWQIGCEDCLGIFS-HNNYVTSVQF 404
Query: 253 H-IQQPLFVSGGDDYKIKVWNYKQ 321
+ + F+SG D K+++W+ Q
Sbjct: 405 NPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWDFS 570
+LSAS D ++R+W C+ + + HN+YV QF+P +D +S S+D VR+W S
Sbjct: 370 LLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSAS 427
Score = 31.9 bits (69), Expect = 0.40
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF 252
K L +F S + IS+ + AS+ N V +LW L F H+ V + F
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNRLLSASVDNSV-RLWQIGCEDCLGIFS-HNNYVTSVQF 404
Query: 253 H-IQQPLFVSGGDDYKIKVWNYKQ 321
+ + F+SG D K+++W+ Q
Sbjct: 405 NPVDDDHFISGSIDGKVRIWSASQ 428
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 51.6 bits (118), Expect = 5e-07
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Frame = +1
Query: 148 LASLHN-GVIQLWDYRMCTL-------LEKFDEHDGPVRGICF-HIQQPLFVSGGD--DY 294
LAS N V+ +WD+R L +F+EH VR + + Q L +GG D
Sbjct: 264 LASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVGDG 323
Query: 295 KIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQT-IRIWNWQSRQCISVLT 471
KIK WN CL ++ + E + S Q + +W + S ++ L
Sbjct: 324 KIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAELN 383
Query: 472 GHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
GH V+ P + SA+ D+++R+W+ G
Sbjct: 384 GHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFG 417
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLE--KFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK 318
VLA + LWD + E DE GPV I + G D+ ++++W++
Sbjct: 136 VLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFV 195
Query: 319 QRRCLFTLLG 348
R + TL+G
Sbjct: 196 SNRQVRTLIG 205
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 51.6 bits (118), Expect = 5e-07
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Frame = +1
Query: 115 GISFHAKRPWVLASLHN----GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSG 282
G+S AK P L + + G I+LWD + +F H G VRG+ + VS
Sbjct: 58 GVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSC 117
Query: 283 GDDYKIKVWNYKQRRCLFTLLGHLDYI--------RTTFF--HHEYPWILSASDDQTIRI 432
G D +++WN + + + ++I + F+ H++ L A+ + I
Sbjct: 118 GTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFATAGAQLDI 177
Query: 433 WNWQSRQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWD 564
WN Q + V+ +F+P E +LL +++ D+S+ ++D
Sbjct: 178 WNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYD 222
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 346 GHLDYIRTTFFHHEY-PWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDL 522
GH D + + Y I SAS D IR+W+ SR+ + GH V ++
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNV 113
Query: 523 LVSASLDQSVRVWD 564
LVS D +VR+W+
Sbjct: 114 LVSCGTDCTVRLWN 127
Score = 34.3 bits (75), Expect = 0.075
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 445 SRQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEH 621
+R + + GH V C +P + SAS+D +R+WD S R PG G
Sbjct: 45 ARPFVGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRG 104
Query: 622 L 624
L
Sbjct: 105 L 105
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 475 HNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSV 591
H VM F PT V+ S D+SVR++ ++G + +
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREI 316
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCI-SVLTGHNHYVMCAQFHP-- 510
L GH + ++ ++S SDD I IWN+ SR+ + S+ TGH + C +F P
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 511 TEDLLVSASLDQSVRVWDFSGL 576
+++L+VS + D VR+++ S L
Sbjct: 106 SDELVVSGAGDAEVRLFNTSRL 127
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/85 (28%), Positives = 42/85 (49%)
Frame = +1
Query: 355 DYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSA 534
D + +F +I S SDD IW Q+ + + VL G + C Q HP + ++ ++
Sbjct: 622 DIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATS 681
Query: 535 SLDQSVRVWDFSGLRKKSVAPGPAG 609
+D ++++W + VA G AG
Sbjct: 682 GIDNTIKIWSPTASVPSIVAGGSAG 706
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +1
Query: 208 EKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTL-LGHLDYIRTTFFHH 384
++ + H G V + ++ L +SG DD +I +WNY R+ L ++ GH I T F
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 385 EY--PWILSASDDQTIRIWN 438
E ++S + D +R++N
Sbjct: 104 ETSDELVVSGAGDAEVRLFN 123
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 277 SGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
SG DD + +W + R + L+G + H + ++ D TI+IW+
Sbjct: 638 SGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWS 691
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 51.2 bits (117), Expect = 6e-07
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Frame = +1
Query: 133 KRPWVLASLHNGVIQLWDY------RMCTLLEKFDEHDGPVRGICFHIQ-QPLFVSGGDD 291
K ++L+ + I LWD ++ + ++ H + + +H++ + +F S GDD
Sbjct: 181 KEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDD 240
Query: 292 YKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRQC-ISV 465
++ +W+ + + + H I F+ W+L +AS D T+ +++ + + V
Sbjct: 241 CQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHV 300
Query: 466 LTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWDFS 570
L+ H V ++ P E +L S+ D+ + VWD +
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDIN 336
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +1
Query: 262 QPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW 441
Q S G D +VW+ + R + GH+ + + F + S +D RIW+
Sbjct: 142 QTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 442 QSRQCISVLTGHNHYVMCAQFHPTED-LLVSASLDQSVRVW---DFS 570
+ R+ + ++ H + V ++ P E L +AS D +V +W DFS
Sbjct: 202 RMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFS 248
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTL 342
+ + ++WD R + F H V + F SGG+D + ++W+ + R+ L+ +
Sbjct: 151 DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYII 210
Query: 343 LGHLDYI-RTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYV 489
H++ + + + E ++ +AS D + IW+ + + L GH V
Sbjct: 211 PAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
S+ D R+W+ ++ + I + GH V+ F P L S D R+WD +
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKL 206
Query: 583 KSVAPGPAGLTEHLR-NPQ 636
+ P L ++ PQ
Sbjct: 207 LYIIPAHVNLVSQVKYEPQ 225
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/116 (24%), Positives = 49/116 (42%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H V + + + VSGG + ++VW+ + L GH D +R + L
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCL 271
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
S S D IR+W+ ++C+ H V +P+ + S DQ + + D +
Sbjct: 272 SGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLA 327
Score = 48.0 bits (109), Expect = 6e-06
Identities = 32/131 (24%), Positives = 58/131 (44%)
Frame = +1
Query: 169 VIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLG 348
V+++WD R + K H VR + +SG D I++W+ Q+RCL T
Sbjct: 236 VLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV 295
Query: 349 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLV 528
H D + + + + S DQ + + + +R+ + + T H + Q ++ +
Sbjct: 296 HTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCT-KEHPIQ--QLALQDNSIW 352
Query: 529 SASLDQSVRVW 561
A+ D SV W
Sbjct: 353 VATTDSSVERW 363
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/78 (21%), Positives = 32/78 (41%)
Frame = +1
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
GH + + + ++S ++ +R+W+ ++ L GH V T
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 526 VSASLDQSVRVWDFSGLR 579
+S S D +R+WD R
Sbjct: 271 LSGSSDSMIRLWDLGQQR 288
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 352 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQ--CISVLTGHNHYVMCAQFHPTEDLL 525
LD ++++ ++ ++ + S D T++ W + C + H +V A E L
Sbjct: 41 LDVLKSSV-SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAAL-AGESTL 98
Query: 526 VSASLDQSVRVWD 564
VS S D +V+ WD
Sbjct: 99 VSCSSDTTVKTWD 111
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
++ GH V + T +LVS ++ +RVWD
Sbjct: 207 TIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWD 241
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/116 (24%), Positives = 49/116 (42%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H V + + + VSGG + ++VW+ + L GH D +R + L
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCL 271
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
S S D IR+W+ ++C+ H V +P+ + S DQ + + D +
Sbjct: 272 SGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLA 327
Score = 48.0 bits (109), Expect = 6e-06
Identities = 32/131 (24%), Positives = 58/131 (44%)
Frame = +1
Query: 169 VIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLG 348
V+++WD R + K H VR + +SG D I++W+ Q+RCL T
Sbjct: 236 VLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV 295
Query: 349 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLV 528
H D + + + + S DQ + + + +R+ + + T H + Q ++ +
Sbjct: 296 HTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCT-KEHPIQ--QLALQDNSIW 352
Query: 529 SASLDQSVRVW 561
A+ D SV W
Sbjct: 353 VATTDSSVERW 363
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/78 (21%), Positives = 32/78 (41%)
Frame = +1
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
GH + + + ++S ++ +R+W+ ++ L GH V T
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 526 VSASLDQSVRVWDFSGLR 579
+S S D +R+WD R
Sbjct: 271 LSGSSDSMIRLWDLGQQR 288
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 352 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQ--CISVLTGHNHYVMCAQFHPTEDLL 525
LD ++++ ++ ++ + S D T++ W + C + H +V A E L
Sbjct: 41 LDVLKSSV-SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAAL-AGESTL 98
Query: 526 VSASLDQSVRVWD 564
VS S D +V+ WD
Sbjct: 99 VSCSSDTTVKTWD 111
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
++ GH V + T +LVS ++ +RVWD
Sbjct: 207 TIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWD 241
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/156 (21%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Frame = +1
Query: 133 KRPWVLASLHNGVIQLWDY------RMCTLLEKFDEHDGPVRGICFHIQ-QPLFVSGGDD 291
K ++L+ + I LWD ++ + ++ H+ + + +H++ + LF S G+D
Sbjct: 180 KEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGED 239
Query: 292 YKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRQC-ISV 465
++ +W+ + + + H + F+ W+L +AS D T+ +++ + + V
Sbjct: 240 GRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHV 299
Query: 466 LTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWDFS 570
++ H V ++ P E +L S+ D+ + VWD +
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLN 335
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 50.4 bits (115), Expect = 1e-06
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Frame = +1
Query: 160 HNGVIQLWDYRMCTL------LEKFDEHDGPVRGICF-HIQQPLFVSGGD--DYKIKVWN 312
++ V+ +WD + + L +F+EH VR + + Q L +GG D KIK WN
Sbjct: 272 NDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWN 331
Query: 313 YKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQT-IRIWNWQSRQCISVLTGHNHYV 489
CL ++ + E + S Q + +W + S ++ L GH V
Sbjct: 332 THTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRV 391
Query: 490 MCAQFHPTEDLLVSASLDQSVRVWDFSG 573
+ P + SA+ D+++R+W+ G
Sbjct: 392 LFMAQSPNGCTVASAAGDENLRLWNVFG 419
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +1
Query: 373 FFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSV 552
FF + +++S SD I IW + + + + H V C + HP L+ S+ +D +
Sbjct: 317 FFGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDI 376
Query: 553 RVWDFSGLRKKSVAPGPAGLTEHLRNPQATD 645
++W G +K ++PG A NP+ D
Sbjct: 377 KIWTPGG-TEKPLSPGNAKQASGFGNPRWFD 406
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 349 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC-ISVLTGHNHYVMCAQFHPTED-- 519
H + T F+ + +LS SDD+ + +W+WQ+ +S +GH + + A+F P D
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDR 113
Query: 520 LLVSASLDQSVR 555
+V+++ D+ VR
Sbjct: 114 TIVTSAADKQVR 125
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +1
Query: 190 RMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTL-LGHLDYI- 363
R L +K D+H G V + F+ + +SG DD ++ +W+++ + GH + I
Sbjct: 43 RRLGLDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIF 102
Query: 364 RTTF--FHHEYPWILSASDDQ 420
+ F F + + SA+D Q
Sbjct: 103 QAKFMPFSDDRTIVTSAADKQ 123
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
VSG D +I +W K L + + H P + S+ D I+IW
Sbjct: 326 VSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDIKIW 379
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Frame = +1
Query: 160 HNGVIQLWDYRMCTL-------LEKFDEHDGPVRGICF-HIQQPLFVSGGD--DYKIKVW 309
++ V+ +WD+R L +F+EH VR + + Q L +GG D KIK W
Sbjct: 238 NDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFW 297
Query: 310 NYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQT-IRIWNWQSRQCISVLTGHNHY 486
N CL ++ + E + S Q + +W + S ++ L GH
Sbjct: 298 NTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSR 357
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
V+ P + SA+ D+++R+W+ G
Sbjct: 358 VLFMAQSPDGCTVASAAGDETLRLWNVFG 386
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ- 444
+ +GG D +++ + L TL GH + + F + +L+AS D+T+RIW
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPG 295
Query: 445 --SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
+ C L H+ V HPT VSASLD + +D S
Sbjct: 296 DGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLS 339
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +1
Query: 382 HEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
H I + D T +++ S Q +S LTGH+ V +F DL+++AS D++VR+W
Sbjct: 232 HSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 5/134 (3%)
Frame = +1
Query: 178 LWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK---QRRCLFTLLG 348
L+D +L H V + F L ++ D +++W C +TL
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLND 307
Query: 349 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYV--MCAQFHPTEDL 522
H +R H + +SAS D T ++ S C++ ++ + V A FHP +
Sbjct: 308 HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLI 367
Query: 523 LVSASLDQSVRVWD 564
L + + V++WD
Sbjct: 368 LGTGTSQSVVKIWD 381
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 217 DEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLG---HLDYIRTTFFHHE 387
++H VR + H FVS D ++ CL + ++DY F H
Sbjct: 306 NDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAF--HP 363
Query: 388 YPWILSASDDQTI-RIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
IL Q++ +IW+ +S+ ++ GH V F L +A+ D VR+WD
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWD 422
Query: 565 FSGLRK-KSVAPGPAGLTE 618
LR KS A E
Sbjct: 423 LRKLRNFKSFLSADANSVE 441
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/79 (21%), Positives = 37/79 (46%)
Frame = +1
Query: 91 ETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL 270
++K+ +FH + V+++WD + + KFD H G V I F +
Sbjct: 350 DSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGY 408
Query: 271 FVSGGDDYKIKVWNYKQRR 327
F++ + +++W+ ++ R
Sbjct: 409 FLATAAEDGVRLWDLRKLR 427
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ- 444
+ +GG D +++ + L TL GH + + F + +L+AS D+T+RIW
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPG 295
Query: 445 --SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
+ C L H+ V HPT VSASLD + +D S
Sbjct: 296 DGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLS 339
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +1
Query: 382 HEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
H I + D T +++ S Q +S LTGH+ V +F DL+++AS D++VR+W
Sbjct: 232 HSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 5/134 (3%)
Frame = +1
Query: 178 LWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK---QRRCLFTLLG 348
L+D +L H V + F L ++ D +++W C +TL
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLND 307
Query: 349 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYV--MCAQFHPTEDL 522
H +R H + +SAS D T ++ S C++ ++ + V A FHP +
Sbjct: 308 HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLI 367
Query: 523 LVSASLDQSVRVWD 564
L + + V++WD
Sbjct: 368 LGTGTSQSVVKIWD 381
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 217 DEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLG---HLDYIRTTFFHHE 387
++H VR + H FVS D ++ CL + ++DY F H
Sbjct: 306 NDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAF--HP 363
Query: 388 YPWILSASDDQTI-RIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
IL Q++ +IW+ +S+ ++ GH V F L +A+ D VR+WD
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWD 422
Query: 565 FSGLRK-KSVAPGPAGLTE 618
LR KS A E
Sbjct: 423 LRKLRNFKSFLSADANSVE 441
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/79 (21%), Positives = 37/79 (46%)
Frame = +1
Query: 91 ETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL 270
++K+ +FH + V+++WD + + KFD H G V I F +
Sbjct: 350 DSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGY 408
Query: 271 FVSGGDDYKIKVWNYKQRR 327
F++ + +++W+ ++ R
Sbjct: 409 FLATAAEDGVRLWDLRKLR 427
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +1
Query: 265 PLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPW-ILSASDDQTIRIWNW 441
P +GG I+V + +L+GH D + P +++AS D+++R+WN
Sbjct: 99 PYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
Query: 442 QSRQCISVLTG---HNHYVMCAQFHPTEDL-LVSASLDQSVRVW 561
++ CI + G H + V+ FHP++ S +D ++++W
Sbjct: 159 ETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIW 202
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 391 PWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWD 564
P++ + IR+ + S L GH V + P + L+++AS D+SVR+W+
Sbjct: 99 PYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWN 157
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 48.8 bits (111), Expect = 3e-06
Identities = 39/191 (20%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
Frame = +1
Query: 76 MLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTL------LEKFDEHDGPV 237
+++ + + V G+ + + + ++ V+ +WD + + L + +EH V
Sbjct: 258 IVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 317
Query: 238 RGICF-HIQQPLFVSGGD--DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSA 408
+ + + Q L +GG D IK WN CL ++ + +E + S
Sbjct: 318 KALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSH 377
Query: 409 SDDQT-IRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
Q + +W + S ++ LTGH V+ P + SA+ D+++R W+ G+ +
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPET 437
Query: 586 SVAPGPAGLTE 618
+ P ++E
Sbjct: 438 AKKAAPKAVSE 448
Score = 32.3 bits (70), Expect = 0.30
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 4/163 (2%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLE--KFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK 318
VLA + + LWD + E DE GPV I + G ++ ++++W+
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 212
Query: 319 QRRCLFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQ-CISVLTGHNHYVM 492
R L TL G H + + +++ + + D I + + R + GH V
Sbjct: 213 SNRQLRTLKGGHQSRVGSLAWNNHI--LTTGGMDGLIINNDVRIRSPIVETYRGHTQEVC 270
Query: 493 CAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEH 621
++ + L S D V +WD S S L EH
Sbjct: 271 GLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEH 313
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 3/151 (1%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYK 297
I F + LA+ ++ + D + H P+ +C+ S +D
Sbjct: 782 IRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDM- 840
Query: 298 IKVWNY---KQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
+KVW + C+ L + + ++ FH YP +L Q++ +WN + ++ L
Sbjct: 841 VKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENKTMT-L 899
Query: 469 TGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
H + L+ SAS D+ V++W
Sbjct: 900 PAHEGLITSLAVSTATGLVASASHDKLVKLW 930
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Frame = +1
Query: 247 CFHIQQP--LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQ 420
C H + S G D K +W + TL H I F + ++S D+
Sbjct: 656 CCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDK 715
Query: 421 TIRIWNWQSR-QCISVLTGHNHYVMCAQFHP-TEDLLVSASLDQSVRVWDFS 570
T+R+W+ ++ + GH+ V FHP +DL+ S D +R W +
Sbjct: 716 TVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSIN 767
Score = 43.6 bits (98), Expect = 1e-04
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 8/207 (3%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHN-GVIQLWDYR--MCTLLEKFDEHDGPVRGIC 249
L+ F S+ V + FH + ++ S N I+ W CT + K G I
Sbjct: 729 LRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYK-----GGSTQIR 783
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 429
F + +++ + V + + + +L GH + I + + ++ S S+D ++
Sbjct: 784 FQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDM-VK 842
Query: 430 IWNW---QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPG 600
+W +C+ L+ + + FHP L+ QS+ +W+ S K P
Sbjct: 843 VWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSE-NKTMTLPA 901
Query: 601 PAGLTEHLRNPQATDLFGQA--DAVVK 675
GL L AT L A D +VK
Sbjct: 902 HEGLITSLAVSTATGLVASASHDKLVK 928
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTL-LEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
VLA +G I LWD R + L H PV + +SGG D KI ++N
Sbjct: 234 VLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLNH 293
Query: 322 RRCLFTLLGHLDYIRT----TFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYV 489
T+ + R T + +A D IR++N++ +++L H
Sbjct: 294 STGSCTIRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATC 353
Query: 490 MCAQFHPTEDLLVSASLDQSVRVW 561
+ P +L+ SAS D +V +W
Sbjct: 354 NAVSYSPDCELMASASEDATVALW 377
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 457 ISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
++VL GH H VM FHP++ LL + S D +R+WD
Sbjct: 10 VAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
Score = 34.7 bits (76), Expect = 0.057
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHN--HYVMCAQFHP- 510
L GH + FH + + S D +RIW+ + +S H+ + V+ P
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPW 72
Query: 511 -TEDLLVSASLDQSVRVWD 564
ED ++S D +V+ WD
Sbjct: 73 LGEDKIISQGRDGTVKCWD 91
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPW-- 396
H V + FH + L +G D ++++W+ Q R + + H PW
Sbjct: 16 HRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAH-SRANGVLAVAASPWLG 74
Query: 397 ---ILSASDDQTIRIWN 438
I+S D T++ W+
Sbjct: 75 EDKIISQGRDGTVKCWD 91
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 48.4 bits (110), Expect = 4e-06
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Frame = +1
Query: 214 FDEHDGPVRGICFHIQQPLFVSGGDDYKIKVW---NYKQRRCLFTLLGHLDYIRTTFFHH 384
F + G + + FH L V+ +D ++++ N KQ + + D R F HH
Sbjct: 20 FSDFGGKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKHGTD--RVCFTHH 77
Query: 385 EYPWILSA-----SDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQS 549
I S+ S +++R + + + GH V+ P D +S SLD+S
Sbjct: 78 PSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRS 137
Query: 550 VRVWD 564
VR+WD
Sbjct: 138 VRLWD 142
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 502 FHPTEDLLVSASLDQSVRVWDFSGLRKKSV 591
FH T+DLLV++S D S+R++D + ++ +
Sbjct: 32 FHRTDDLLVTSSEDDSLRLFDIANAKQLKI 61
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +1
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCA 498
+++C F+L F + ++LS S D T+ WN ++ ++ + V C
Sbjct: 233 EKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCL 292
Query: 499 QFHPTEDLLVSAS 537
++ P + V+AS
Sbjct: 293 KWAPRRAMFVAAS 305
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 48.4 bits (110), Expect = 4e-06
Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 10/191 (5%)
Frame = +1
Query: 76 MLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTL------LEKFDEHDGPV 237
+++ + + V G+ + + + ++ V+ +WD + + L + +EH V
Sbjct: 248 IVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 307
Query: 238 RGICF-HIQQPLFVSGGD--DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSA 408
+ + + Q L +GG D IK WN CL ++ + +E + S
Sbjct: 308 KALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSH 367
Query: 409 SDDQT-IRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
Q + +W + S ++ LTGH V+ P + SA+ D+++R W+ G+ +
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPET 427
Query: 586 SVAPGPAGLTE 618
+ P + E
Sbjct: 428 AKKAAPKAVAE 438
Score = 32.3 bits (70), Expect = 0.30
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 4/163 (2%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLE--KFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK 318
VLA + + LWD + E DE GPV I + G ++ ++++W+
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 202
Query: 319 QRRCLFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQ-CISVLTGHNHYVM 492
R L TL G H + + +++ + + D I + + R + GH V
Sbjct: 203 SNRQLRTLKGGHQSRVGSLAWNNHI--LTTGGMDGLIINNDVRIRSPIVETYRGHTQEVC 260
Query: 493 CAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEH 621
++ + L S D V +WD S S L EH
Sbjct: 261 GLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEH 303
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRR-----CLFTLLGHLDYIRTTFFHHE 387
H+ V+ + ++ L + G D + +W + + L GH + ++ +H
Sbjct: 91 HESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPT 150
Query: 388 YPWILSASDDQTIRIWNWQSRQ----CISVLT----GHNHYVMCAQFHPTEDLLVSASLD 543
+ S S D TI+IW + C+ L+ GH+ V F+ D +V+ S D
Sbjct: 151 MDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDD 210
Query: 544 QSVRVW 561
+V++W
Sbjct: 211 LAVKIW 216
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQ-----CISVLTGHNHYVMCAQF 504
L GH +++ ++ + + D+++ IW Q + I+VLTGH+ V +
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW 147
Query: 505 HPTEDLLVSASLDQSVRVW 561
HPT D+L S S D ++++W
Sbjct: 148 HPTMDVLFSCSYDNTIKIW 166
Score = 29.5 bits (63), Expect(2) = 0.12
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 451 QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ +SVL GH V ++ + LL + D+SV +W+
Sbjct: 83 ESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWE 120
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Frame = +1
Query: 100 SARVKGISFHAKRPWVLASLHNGVIQLW-------DYRMC-TLLEKFDEHDGPVRGICFH 255
S VK + +H + + ++ I++W DY TL E + H V I F+
Sbjct: 139 SEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFN 198
Query: 256 IQQPLFVSGGDDYKIKVW 309
V+ DD +K+W
Sbjct: 199 AAGDKMVTCSDDLAVKIW 216
Score = 23.0 bits (47), Expect(2) = 0.12
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQS 447
L GH D + ++ ++ S S D+T+RIW S
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSS 52
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 47.6 bits (108), Expect = 8e-06
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 6/175 (3%)
Frame = +1
Query: 73 KMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLW---DYRMCTLLEKFDEHDGPVRG 243
++L S +V I F VL + + +++W + T +H VR
Sbjct: 255 QILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRA 314
Query: 244 ICFHIQQPLFVSGGDDYKIKVWNYKQRRCL--FTLLGHLDYIRTTFFHHEYPWILSASDD 417
+ H FVS D ++ CL T D T H IL
Sbjct: 315 VTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTA 374
Query: 418 QTI-RIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLR 579
Q+I +IW+ +S+ ++ GHN + F L +A+LD VR+WD L+
Sbjct: 375 QSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRLWDLRKLK 428
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW---- 435
+ +GG D +++ + L TL GH + + F + +L+AS D+T+RIW
Sbjct: 236 VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSE 295
Query: 436 --NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
N+ SR L H+ V H T VSASLD + +D S
Sbjct: 296 DGNYTSRH---TLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLS 339
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 382 HEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
H I + D T +++ S Q +S LTGH+ V +F DL+++AS D++VR+W
Sbjct: 232 HSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIW 291
Query: 562 DFS 570
S
Sbjct: 292 GCS 294
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWD 564
+ S D T++I + ++ +C+ +LTGH +FHP +++ S SLD VR+W+
Sbjct: 118 LASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWN 174
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRQCISV 465
D+ +K+ + + +CL L GH FH + I+ S S D +R+WN ++ +CI
Sbjct: 124 DHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT 183
Query: 466 LTGHNHY--VMCAQFHPTEDLLVSASLDQSVRVWDFS 570
H+ Y + FH +LL AS + +W ++
Sbjct: 184 ---HDFYRPIASIAFHAGGELLAVAS-GHKLHIWHYN 216
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPT-EDLLVSASLDQSVRVWD 564
+ S D T++I + ++ +C+ +LTGH +FHP +++ S SLD VR+W+
Sbjct: 118 LASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWN 174
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRQCISV 465
D+ +K+ + + +CL L GH FH + I+ S S D +R+WN ++ +CI
Sbjct: 124 DHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT 183
Query: 466 LTGHNHY--VMCAQFHPTEDLLVSASLDQSVRVWDFS 570
H+ Y + FH +LL AS + +W ++
Sbjct: 184 ---HDFYRPIASIAFHAGGELLAVAS-GHKLHIWHYN 216
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 46.8 bits (106), Expect = 1e-05
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQR-RCLFT----LLGHLDYIRTTFF--- 378
HD VRGIC + + S D I+VW+ + +T LLGH ++ +
Sbjct: 19 HDDDVRGICVCNDENIATSSRDR-TIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPP 77
Query: 379 HHEYPW--ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSV 552
EYP ++S S D + +WN + + I L GH V ED +VS+S+DQ++
Sbjct: 78 TDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI-DNED-IVSSSVDQTL 135
Query: 553 RVWDFSGLRKKSVAPGPAGLTEHLRNPQATDLFGQADAVVK 675
+ W +G +S + + +R P + G +DA +K
Sbjct: 136 KRWR-NGQLVESWDAHQSPIQAVIRLPSGELVSGSSDASLK 175
Score = 44.0 bits (99), Expect = 9e-05
Identities = 38/130 (29%), Positives = 61/130 (46%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGH 351
++LW + T L+ H VRG+ + F+S D I++W L ++GH
Sbjct: 174 LKLWKGK--TSLQTLSGHTDTVRGLAV-MPDLGFLSASHDGSIRLWALSGE-VLLEMVGH 229
Query: 352 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVS 531
+ + H I+SAS+D+ +I W+ C+ L H + A+F T D +V+
Sbjct: 230 TSLVYSVDAHSS-GLIVSASEDRHAKI--WKDGVCVQSLE-HPGCIWDAKFLETGD-IVT 284
Query: 532 ASLDQSVRVW 561
A D VRVW
Sbjct: 285 ACSDGVVRVW 294
Score = 34.3 bits (75), Expect = 0.075
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
++S S D ++++W + + + L+GH V P L SAS D S+R+W SG
Sbjct: 165 LVSGSSDASLKLW--KGKTSLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLWALSG 220
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 46.8 bits (106), Expect = 1e-05
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQR-RCLFT----LLGHLDYIRTTFF--- 378
HD VRGIC + + S D I+VW+ + +T LLGH ++ +
Sbjct: 19 HDDDVRGICVCNDENIATSSRDR-TIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPP 77
Query: 379 HHEYPW--ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSV 552
EYP ++S S D + +WN + + I L GH V ED +VS+S+DQ++
Sbjct: 78 TDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI-DNED-IVSSSVDQTL 135
Query: 553 RVWDFSGLRKKSVAPGPAGLTEHLRNPQATDLFGQADAVVK 675
+ W +G +S + + +R P + G +DA +K
Sbjct: 136 KRWR-NGQLVESWDAHQSPIQAVIRLPSGELVSGSSDASLK 175
Score = 44.0 bits (99), Expect = 9e-05
Identities = 38/130 (29%), Positives = 61/130 (46%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGH 351
++LW + T L+ H VRG+ + F+S D I++W L ++GH
Sbjct: 174 LKLWKGK--TSLQTLSGHTDTVRGLAV-MPDLGFLSASHDGSIRLWALSGE-VLLEMVGH 229
Query: 352 LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVS 531
+ + H I+SAS+D+ +I W+ C+ L H + A+F T D +V+
Sbjct: 230 TSLVYSVDAHSS-GLIVSASEDRHAKI--WKDGVCVQSLE-HPGCIWDAKFLETGD-IVT 284
Query: 532 ASLDQSVRVW 561
A D VRVW
Sbjct: 285 ACSDGVVRVW 294
Score = 34.3 bits (75), Expect = 0.075
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
++S S D ++++W + + + L+GH V P L SAS D S+R+W SG
Sbjct: 165 LVSGSSDASLKLW--KGKTSLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLWALSG 220
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Frame = +1
Query: 214 FDEHDGPVRGICF-HIQQPLFVSGGDDYKIKVWNY-KQRRCLFTLLGHLDYIRTTFFHHE 387
FD+ V + F H+ + G D + V + ++ L L GH + F
Sbjct: 168 FDQCKSSVTVLKFGHMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSN 227
Query: 388 YPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSA-SLDQSVRVWD 564
+I S+S D+TIR+W CI V+ G + C +FHP + +SA + ++ + V++
Sbjct: 228 NQYIASSSLDKTIRVWELSRGVCIRVIYGISPQ-YCIRFHPVNNNFLSAGNANKELTVFN 286
Query: 565 FS 570
FS
Sbjct: 287 FS 288
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = +1
Query: 298 IKVWNYKQRRCLFTLLGHLDYIRTTFFH----HEYPWILSASDDQTIRIWNWQSRQ--CI 459
+++ Y RC L + I+ +F + +I++ S+D + ++ + C+
Sbjct: 382 LQIKGYLTLRCSLKLAPRIHRIQASFCPLLSLEKGEYIVAGSEDSNVYFYDLTKPKHTCV 441
Query: 460 SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
+ L GH VMC ++ E+LL S+ V VW
Sbjct: 442 NKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP-TEDLLVSASLDQSVRVWD 564
+ S D T++I + ++ C+ VLTGH +FHP +++ S SLD VR+W+
Sbjct: 121 LASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWN 177
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +1
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNWQSRQCISV 465
D+ +K+ + + CL L GH FH H + S S D +R+WN + +CI
Sbjct: 127 DHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSECI-- 184
Query: 466 LTGHNHY--VMCAQFHPTEDLLVSASLDQSVRVWDFS 570
H Y + FH +LL AS + +W ++
Sbjct: 185 -RSHLFYRPIASIAFHAEGELLAVAS-GHKLHMWHYN 219
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 46.0 bits (104), Expect = 2e-05
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Frame = +1
Query: 85 KFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGI---CF- 252
+FET + K H P V+A+ N I++W+Y TLL FD HD P +GI C
Sbjct: 1025 RFETGT---KTALLHPFSPIVVAADENERIRVWNYEEATLLNGFDNHDFPDKGISKLCLI 1081
Query: 253 -HIQQPLFVSGGDDYKIKVW-NY--KQRRCLFT----LLGH----LDYIRTTFFHHEYPW 396
+ L + D +++W NY K ++ L T + GH D + + +
Sbjct: 1082 NELDDSLLLVASCDGSVRIWKNYATKGKQKLVTGFSSIQGHKPGARDLNAVVDWQQQSGY 1141
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNH----YVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ ++ + T+ +W+ + Q + + + + +Q H + L + D S+R++D
Sbjct: 1142 LYASGETSTVTLWDLEKEQLVRSVPSESECGVTALSASQVHGGQ--LAAGFADGSLRLYD 1199
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = +1
Query: 322 RRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHY----- 486
R T+ H + H P I S S Q I++++ Q Q + ++ + +
Sbjct: 1251 RDTYLTIDAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLQGEQ-LGIIRYYPSFMAQKI 1309
Query: 487 --VMCAQFHPTEDLLVSASLDQSVRVW 561
V C FHP + LL + + D V ++
Sbjct: 1310 GSVSCLTFHPYQVLLAAGAADSFVSIY 1336
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +1
Query: 97 KSARVKGISFHA--KRPWVLASLHNGVIQLWDYRMC--TLLEKFDEHDGPVRGICFHIQQ 264
K RV G+SF V+++ G IQ D R T L D H G + + H
Sbjct: 1215 KVERVVGLSFQPGLDPAKVVSASQAGDIQFLDLRTTRDTYLT-IDAHRGSLTALAVHRHA 1273
Query: 265 PLFVSGGDDYKIKVWN 312
P+ SG IKV++
Sbjct: 1274 PIIASGSAKQLIKVFS 1289
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 45.6 bits (103), Expect = 3e-05
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Frame = +1
Query: 160 HNGVIQLWDYRMCTL------LEKFDEHDGPVRGICF-HIQQPLFVSGGD--DYKIKVWN 312
++ V+ +WD + + L +F+EH VR + + Q L +GG D KI WN
Sbjct: 256 NDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWN 315
Query: 313 YKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQT-IRIWNWQSRQCISVLTGHNHYV 489
CL ++ + E + + Q + +W + S ++ L GH V
Sbjct: 316 THTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRV 375
Query: 490 MCAQFHPTEDLLVSASLDQSVRVWDFSG 573
+ P + SA+ D+++R+W+ G
Sbjct: 376 LFMAQSPDGCTVASAAGDETLRLWNVFG 403
Score = 34.3 bits (75), Expect = 0.075
Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 2/135 (1%)
Frame = +1
Query: 172 IQLWDYRMC--TLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL 345
+ LWD C + L D+ +GPV I + G D+ +++VW+ R + TL
Sbjct: 132 VYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLR 191
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
G + + + + D + + I GH V ++ + L
Sbjct: 192 GGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKL 251
Query: 526 VSASLDQSVRVWDFS 570
S D V +WD S
Sbjct: 252 ASGGNDNVVHIWDRS 266
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +1
Query: 325 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQF 504
+ + TL GH + + + + S S D T+ IWN ++ C +VL GH V +
Sbjct: 109 KAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTW 168
Query: 505 HPTEDLLVSASLDQSVRVW 561
P + S S D++V +W
Sbjct: 169 DPIGSFIASQSDDKTVIIW 187
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H V + + + SG D + +WN + C L GHL ++ + +I
Sbjct: 117 HTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIA 176
Query: 403 SASDDQTIRIW 435
S SDD+T+ IW
Sbjct: 177 SQSDDKTVIIW 187
Score = 34.3 bits (75), Expect = 0.075
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Frame = +1
Query: 271 FVSGGDDYKIKVWNYK----QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW- 435
F +GG D+K + + + R L TL H + + ++ S SDDQ I+I
Sbjct: 28 FATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHE 87
Query: 436 ----------------NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ ++ + + L GH V+ + P + +L S SLD +V +W+
Sbjct: 88 RKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWN 146
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/114 (24%), Positives = 45/114 (39%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H V + L SG D+ +K++ + + IR F+ +
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLA 120
Query: 403 SASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+A DD+ I++ N + VL GH V FHP +LL S +V W+
Sbjct: 121 AAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWE 174
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = +1
Query: 232 PVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSAS 411
P+R + F+ L + GDD IK+ N + L GH + FH + S
Sbjct: 106 PIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASID 165
Query: 412 DDQTIRIWNWQS 447
T+ W Q+
Sbjct: 166 TTGTVLCWELQN 177
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/161 (20%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYR--MCTLLEKFDEH--DGPVRGICFHIQQPLFV 276
V+ ISFH ++LA + + L+D C L F + G + + + +++
Sbjct: 131 VRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYI 190
Query: 277 SGGDDYKIKVWNYKQRRCLFTL-LGH-LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 450
+ D I++++ +C+ ++ H + + F + ++LS+ D T+++W S
Sbjct: 191 TASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSG 250
Query: 451 QCISVLTGHNHYVMCAQ--FHPTEDLLVSA-SLDQSVRVWD 564
+ + G + +Q F+ TE+ ++S V WD
Sbjct: 251 RMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWD 291
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 6/160 (3%)
Frame = +1
Query: 100 SARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGP--VRGICFHIQQPLF 273
S + + + + + + +G I+L+D + G V F Q
Sbjct: 174 SGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFV 233
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDY-IRTTFFHHEYPWILSASDDQTIRIWNWQSR 450
+S G D +K+W R + LG +R+ ++ + + D+ + + W +R
Sbjct: 234 LSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWDAR 293
Query: 451 QCISVL---TGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
V + HN + P E + V+ +D+S+R W
Sbjct: 294 TADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 333
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 442 QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
Q+R I H + FHP +L+S++ D ++ +DFS
Sbjct: 72 QARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFS 114
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Frame = +1
Query: 220 EHDGPVRGICFHIQQPLFVSGGDDYKIKVW---NYKQ--------RRCLFTLLGHLDYIR 366
EH VR F F +GG D IK++ KQ R + T H + I
Sbjct: 29 EHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIN 88
Query: 367 TTFFHHEYPWILSASDDQTIRIWNWQ---SRQCISVLTGHNHYVMCAQFHPTEDLLVSAS 537
FH ++S++ D I+ +++ +++ V H V FHP+ + L++ +
Sbjct: 89 DLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQ-DTHNVRSISFHPSGEFLLAGT 147
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/161 (20%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYR--MCTLLEKFDEH--DGPVRGICFHIQQPLFV 276
V+ ISFH ++LA + + L+D C L F + G + + + +++
Sbjct: 223 VRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYI 282
Query: 277 SGGDDYKIKVWNYKQRRCLFTL-LGH-LDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 450
+ D I++++ +C+ ++ H + + F + ++LS+ D T+++W S
Sbjct: 283 TASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSG 342
Query: 451 QCISVLTGHNHYVMCAQ--FHPTEDLLVSA-SLDQSVRVWD 564
+ + G + +Q F+ TE+ ++S V WD
Sbjct: 343 RMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWD 383
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 6/160 (3%)
Frame = +1
Query: 100 SARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGP--VRGICFHIQQPLF 273
S + + + + + + +G I+L+D + G V F Q
Sbjct: 266 SGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFV 325
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDY-IRTTFFHHEYPWILSASDDQTIRIWNWQSR 450
+S G D +K+W R + LG +R+ ++ + + D+ + + W +R
Sbjct: 326 LSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWDAR 385
Query: 451 QCISVL---TGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
V + HN + P E + V+ +D+S+R W
Sbjct: 386 TADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 425
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 442 QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
Q+R I H + FHP +L+S++ D ++ +DFS
Sbjct: 164 QARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFS 206
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Frame = +1
Query: 220 EHDGPVRGICFHIQQPLFVSGGDDYKIKVW---NYKQ--------RRCLFTLLGHLDYIR 366
EH VR F F +GG D IK++ KQ R + T H + I
Sbjct: 121 EHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIN 180
Query: 367 TTFFHHEYPWILSASDDQTIRIWNWQ---SRQCISVLTGHNHYVMCAQFHPTEDLLVSAS 537
FH ++S++ D I+ +++ +++ V H V FHP+ + L++ +
Sbjct: 181 DLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQ-DTHNVRSISFHPSGEFLLAGT 239
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS 447
+F + GD W+ + + T GH DY+ T IL+ S+D T RIW+ ++
Sbjct: 174 VFTAAGDSCAY-CWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKT 232
Query: 448 RQCISVL 468
+C+ V+
Sbjct: 233 GKCVKVI 239
Score = 29.9 bits (64), Expect = 1.6
Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 27/176 (15%)
Frame = +1
Query: 118 ISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH--IQQPLFVSGGDD 291
++FH+ V S G + D + H+GP + F+ + L +S GDD
Sbjct: 54 LAFHSLNSLVSQSASFGYSKGQDVMVAEPERVVRAHEGPAYDVKFYGEDEDALLLSCGDD 113
Query: 292 YKIKVWNYKQRR----CLFTLLGHL-DYIRTTFFHHEYPW-------------------- 396
+++ W +++ L HL + H+ PW
Sbjct: 114 GRVRGWKWREFAESDVSLHLKENHLKPLLELINPQHKGPWGALSPMPEINAMSVDPQSGS 173
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ +A+ D W+ +S + GH+ Y+ + +++ S D + R+WD
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/169 (16%), Positives = 61/169 (36%), Gaps = 5/169 (2%)
Frame = +1
Query: 181 WDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLD- 357
WD + F H + + ++G +D ++W+ K +C+ ++G D
Sbjct: 186 WDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCV-KVIGSQDK 244
Query: 358 ----YIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
+ + W++ + + +WN + +C+ + H V F + L
Sbjct: 245 KSRLRVSSMALDGSESWLV-CGQGKNLALWNLPASECVQTIPIPAH-VQDVMFDEKQILT 302
Query: 526 VSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHLRNPQATDLFGQADAVV 672
V A + +R +D +G + P + +P G +V
Sbjct: 303 VGA--EPLLRRFDLNGALLSQIHCAPCSVFSISLHPAGVVAVGGYGGIV 349
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 44.0 bits (99), Expect = 9e-05
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVW----NYKQRRCLFT 339
+++W E HD V I ++ +G D +I+VW K+ + T
Sbjct: 217 LKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVY-TGSADRRIRVWAKPTGEKRHTLVAT 275
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTG--HNHYVMCAQFHPT 513
L H + + + + S S D++I +W + + G H
Sbjct: 276 LEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNV 335
Query: 514 EDLLVSASLDQSVRVW 561
DLL+S S D++VR+W
Sbjct: 336 SDLLLSGSADRTVRIW 351
Score = 35.5 bits (78), Expect = 0.033
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Frame = +1
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW----NWQSRQC 456
D +K+W RC ++ H D + + + S D+ IR+W +
Sbjct: 214 DKTLKIWRASDLRCKESIKAHDDAVNAIAVSTN-GTVYTGSADRRIRVWAKPTGEKRHTL 272
Query: 457 ISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
++ L H V + +L S S D+S+ VW+
Sbjct: 273 VATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
+I S S D+T++IW +C + H+ V T + + S D+ +RVW
Sbjct: 207 FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAV-STNGTVYTGSADRRIRVW 261
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK-QRRCLFT 339
+G +Q+WD C + H + ++ + + SG D I + + Q +
Sbjct: 236 HGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSR--ILSSGSRDRNILQHDIRVQSDFVSK 293
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED 519
L+GH + + H+ + S +D + +WN S+Q I LT H V + P +
Sbjct: 294 LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQS 353
Query: 520 LLVSA---SLDQSVRVWD 564
L+++ + D+ +R W+
Sbjct: 354 SLLASGGGTADRCIRFWN 371
Score = 37.5 bits (83), Expect = 0.008
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +1
Query: 178 LWDYRMCTLLEKFDEHDGPVRGICFHIQQP-LFVSGGD--DYKIKVWNYKQRRCLFTLLG 348
+W+ + K EH V+ I + Q L SGG D I+ WN L ++
Sbjct: 324 VWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDT 383
Query: 349 HLDYIRTTFFHHEYPWILSASDDQT-IRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
+ + + + Q I +W + S ++ LTGH+ V+ P +
Sbjct: 384 GSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTI 443
Query: 526 VSASLDQSVRVWD 564
V+ + D+++R W+
Sbjct: 444 VTGAGDETLRFWN 456
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 373 FFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSV 552
FF +++S SD I IW + + I V+ H V C + HP +L S+ ++ +
Sbjct: 341 FFGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHPHIPVLASSGIESDI 400
Query: 553 RVW 561
+VW
Sbjct: 401 KVW 403
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 349 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ-SRQCISVLTGHNHYVMCAQFHPTED-- 519
H + T F+ E ++S SDD+ + +W+WQ +S +GH + V A+F P D
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDR 117
Query: 520 LLVSASLDQSVR 555
+V+ + D VR
Sbjct: 118 TIVTCAADGMVR 129
Score = 33.1 bits (72), Expect = 0.17
Identities = 10/39 (25%), Positives = 25/39 (64%)
Frame = +1
Query: 202 LLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK 318
+ +K ++H G V + F+ + + +SG DD ++ +W+++
Sbjct: 51 IYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQ 89
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H G V + + ++ VS D ++ VWN + + ++ T F +
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVA 123
Query: 403 SASDDQTIRIWNWQSRQ-------CISVLTGHNHYVMCAQFHPTEDL-LVSASLDQSVRV 558
D I++ S +LTGH YV C Q+ P ED L+++S DQ+ +
Sbjct: 124 CGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCIL 183
Query: 559 WDFSGLRKKSVAPG 600
WD + K SV G
Sbjct: 184 WDVTTGLKTSVFGG 197
Score = 34.3 bits (75), Expect = 0.075
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 328 CLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFH 507
C TL GH + + + E I+SAS D + +WN + Q + +VM F
Sbjct: 57 CCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFS 116
Query: 508 PTEDLLVSASLDQSVRVWDFSGLR-KKSVAPGPAGLTEH 621
P + LD ++ S K P LT H
Sbjct: 117 PNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGH 155
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQ-SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
W +S S D T R+W+ + + + + GH V +F P + S D + R++D
Sbjct: 219 WFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYD 276
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H G V + + ++ VS D ++ VWN + + ++ T F +
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVA 123
Query: 403 SASDDQTIRIWNWQSRQ-------CISVLTGHNHYVMCAQFHPTEDL-LVSASLDQSVRV 558
D I++ S +LTGH YV C Q+ P ED L+++S DQ+ +
Sbjct: 124 CGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCIL 183
Query: 559 WDFSGLRKKSVAPG 600
WD + K SV G
Sbjct: 184 WDVTTGLKTSVFGG 197
Score = 37.5 bits (83), Expect = 0.008
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 11/172 (6%)
Frame = +1
Query: 100 SARVKGISFHAKRP-WVLASLHNGVIQLWDYRMCT-LLEKFDEHDGPVRGICFHIQQPLF 273
+A V +S P W ++ + +LWD R + + F H+G V + F F
Sbjct: 204 TADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRF 263
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDYIR---TTFFHHEYPWILSA--SDDQTIRIWN 438
+G DD ++++ + L H D T+ +L A + + T +W+
Sbjct: 264 GTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 323
Query: 439 WQSRQCISVL----TGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
+ + L H + + C L + S D ++++W F G R+
Sbjct: 324 TLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIWAFGGHRR 375
Score = 34.3 bits (75), Expect = 0.075
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 328 CLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFH 507
C TL GH + + + E I+SAS D + +WN + Q + +VM F
Sbjct: 57 CCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFS 116
Query: 508 PTEDLLVSASLDQSVRVWDFSGLR-KKSVAPGPAGLTEH 621
P + LD ++ S K P LT H
Sbjct: 117 PNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGH 155
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Frame = +1
Query: 175 QLWDYRMCTLLEKFDEHDGPVRGI--CFHIQQ-PLFVSGGDDYKIKVWNYKQRRCLFTLL 345
QLW L+ D +G + CF + + +V KI ++N + + T +
Sbjct: 825 QLWQPSSGVLMTN-DTREGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFM 883
Query: 346 GHLDYIRTTFFHHEYPWILSAS-DDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDL 522
+ FH + I++ DD +I+I+N + + S L GH V F ++
Sbjct: 884 APPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNV 943
Query: 523 LVSASLDQSVRVWDFSGLRKKS 588
LVS+ D + VW G K++
Sbjct: 944 LVSSGADSQLCVWSMDGWEKQA 965
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL-FV-SGGDDYKIKVWNY 315
I++WD L F+ H+ PV +C H ++ + F+ S D KIK W Y
Sbjct: 490 IKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLY 539
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +1
Query: 211 KFDEHDGPVRGICFHI--QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH 384
+ D H G V + F QQ V+ G+D IKVW+ L T GH + + H
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQ 518
Query: 385 E--YPWILSASDDQTIRIW 435
+ +I S + D I+ W
Sbjct: 519 KENIQFIFSTAVDGKIKAW 537
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNH--YVMCAQFHPTEDLLVSASLDQSVRVW--D 564
+++ +D+TI++W+ + + GH Y +C + S ++D ++ W D
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLYD 540
Query: 565 FSGLRKKSVAPG 600
G R APG
Sbjct: 541 NMGSRVDYDAPG 552
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Frame = +1
Query: 175 QLWDYRMCTLLEKFDEHDGPVRGI--CFHIQQ-PLFVSGGDDYKIKVWNYKQRRCLFTLL 345
QLW L+ D +G + CF + + +V KI ++N + + T +
Sbjct: 825 QLWQPSSGVLMTN-DTREGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFM 883
Query: 346 GHLDYIRTTFFHHEYPWILSAS-DDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDL 522
+ FH + I++ DD +I+I+N + + S L GH V F ++
Sbjct: 884 APPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNV 943
Query: 523 LVSASLDQSVRVWDFSGLRKKS 588
LVS+ D + VW G K++
Sbjct: 944 LVSSGADSQLCVWSMDGWEKQA 965
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL-FV-SGGDDYKIKVWNY 315
I++WD L F+ H+ PV +C H ++ + F+ S D KIK W Y
Sbjct: 490 IKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLY 539
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +1
Query: 211 KFDEHDGPVRGICFHI--QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH 384
+ D H G V + F QQ V+ G+D IKVW+ L T GH + + H
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQ 518
Query: 385 E--YPWILSASDDQTIRIW 435
+ +I S + D I+ W
Sbjct: 519 KENIQFIFSTAVDGKIKAW 537
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNH--YVMCAQFHPTEDLLVSASLDQSVRVW--D 564
+++ +D+TI++W+ + + GH Y +C + S ++D ++ W D
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLYD 540
Query: 565 FSGLRKKSVAPG 600
G R APG
Sbjct: 541 NMGSRVDYDAPG 552
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 42.3 bits (95), Expect = 3e-04
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 9/177 (5%)
Frame = +1
Query: 109 VKGISFHA--KRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL-FV- 276
V ISF K+ V+ + I++WD F+ H+ PV +C H ++ + F+
Sbjct: 465 VNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIF 524
Query: 277 SGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILS---ASDDQTIRI-WNWQ 444
S D KIK W Y + T + + + S + D ++ + WN
Sbjct: 525 STALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNES 584
Query: 445 SRQCISVLTG-HNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGL 612
G H + QF T++ ++A D S++ WD ++ + G GL
Sbjct: 585 EGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGL 641
Score = 41.1 bits (92), Expect = 7e-04
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = +1
Query: 247 CFHIQQ-PLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSAS-DDQ 420
CF + + +V KI ++N + + T + FH + I++ DD
Sbjct: 840 CFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDS 899
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK--SVA 594
TI+I+N + + S L GH+ + F ++LVS+ D + VW+ G K+ V
Sbjct: 900 TIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQRSKVL 959
Query: 595 PGPAG 609
P P G
Sbjct: 960 PLPQG 964
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 42.3 bits (95), Expect = 3e-04
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 9/177 (5%)
Frame = +1
Query: 109 VKGISFHA--KRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL-FV- 276
V ISF K+ V+ + I++WD F+ H+ PV +C H ++ + F+
Sbjct: 465 VNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIF 524
Query: 277 SGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILS---ASDDQTIRI-WNWQ 444
S D KIK W Y + T + + + S + D ++ + WN
Sbjct: 525 STALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNES 584
Query: 445 SRQCISVLTG-HNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGL 612
G H + QF T++ ++A D S++ WD ++ + G GL
Sbjct: 585 EGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGL 641
Score = 41.1 bits (92), Expect = 7e-04
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = +1
Query: 247 CFHIQQ-PLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSAS-DDQ 420
CF + + +V KI ++N + + T + FH + I++ DD
Sbjct: 840 CFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDS 899
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK--SVA 594
TI+I+N + + S L GH+ + F ++LVS+ D + VW+ G K+ V
Sbjct: 900 TIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQRSKVL 959
Query: 595 PGPAG 609
P P G
Sbjct: 960 PLPQG 964
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRC---LFTLLGHLDYIRTTFFHHEYPW--ILSASDDQTIRI 432
L +GG D ++VW+ ++ +F H +I +H W +LSAS D I +
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKS-SWFHLLSASYDGKIML 385
Query: 433 WNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRV 558
W+ ++ +SV+ HN V+ A + E +VS D ++R+
Sbjct: 386 WDLRTAWPLSVIDTHNDKVLSADWWKGES-VVSGGADSNLRI 426
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 85 KFETKSARVKGISFHAKRPW--VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI 258
+F + S+ + +H K W +L++ ++G I LWD R L D H+ V +
Sbjct: 353 QFSSHSSWISACKWH-KSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWWK 411
Query: 259 QQPLFVSGGDDYKIKV 306
+ + VSGG D +++
Sbjct: 412 GESV-VSGGADSNLRI 426
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 451 QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ ++ L GH V + P D++ S+S D SVR WD
Sbjct: 263 EAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWD 299
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 463 VLTGHNHYVMCAQFHPTEDL-LVSASLDQSVRVWDFSGLRKKSVAPG 600
+LTGH YV C Q+ P ED L+++S DQ+ +WD + K SV G
Sbjct: 89 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGG 135
Score = 37.5 bits (83), Expect = 0.008
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 11/172 (6%)
Frame = +1
Query: 100 SARVKGISFHAKRP-WVLASLHNGVIQLWDYRMCT-LLEKFDEHDGPVRGICFHIQQPLF 273
+A V +S P W ++ + +LWD R + + F H+G V + F F
Sbjct: 142 TADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRF 201
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGHLDYIR---TTFFHHEYPWILSA--SDDQTIRIWN 438
+G DD ++++ + L H D T+ +L A + + T +W+
Sbjct: 202 GTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 261
Query: 439 WQSRQCISVL----TGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
+ + L H + + C L + S D ++++W F G R+
Sbjct: 262 TLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIWAFGGHRR 313
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGL 576
I+SAS D + +WN + Q + +VM F P + LD ++ S
Sbjct: 18 IVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSST 77
Query: 577 R-KKSVAPGPAGLTEH 621
K P LT H
Sbjct: 78 ADKDGTVPVSRMLTGH 93
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +1
Query: 244 ICFHIQQPLFVSGGDDYKIKVWNYKQRRCL--FTLLGHLDYIRTTFFHHEYPWILSASDD 417
I + I +F++G D+ +KVW+ + + F + G + + + I + +DD
Sbjct: 110 IWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGTDD 169
Query: 418 QTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED-LLVSASLDQSVRVWD 564
+R+ + S L+GH VM ++ + + +L + D ++R WD
Sbjct: 170 VQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWD 219
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQ 444
L +G DD ++++ + TL GH D + + + W+L + D IR W+ +
Sbjct: 162 LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIR 221
Query: 445 SRQCISVL 468
C VL
Sbjct: 222 RAGCFRVL 229
Score = 32.7 bits (71), Expect = 0.23
Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 3/180 (1%)
Frame = +1
Query: 70 IKMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGIC 249
+K L+ T S VKG S +++P V S + M + L++ H G V G+
Sbjct: 266 LKTLQSKHTGSQSVKGSS--SEKPSVEKSRQKRIHP----GMLSTLDRATAHYGVVTGLK 319
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQ-RRCLFTL-LGHLDYIRTTFFH-HEYPWILSASDDQ 420
+S G +I++W+ + R L G + R + P ++ +
Sbjct: 320 ATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDTSDDPALVFVPCMK 379
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPG 600
T++ + S + +L GH V F+ + L ++ D+ + VW G + +A G
Sbjct: 380 TVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWSPGGSVEDEMAQG 439
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +1
Query: 205 LEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH 384
L + H G V CF + + SG D IK+W+ +C+ TL H + +
Sbjct: 251 LTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWD 308
Query: 385 EYPWILSASDDQTIRIWNWQSRQCISVL 468
+ ++S+S D TI++W + + V+
Sbjct: 309 K--CLISSSLDGTIKVWAYSENGILKVV 334
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
+ S S D+TI++W+ + QCI L H V + L+S+SLD +++VW +S
Sbjct: 271 LYSGSVDKTIKMWDLNTLQCIMTLKQHTGTV--TSLLCWDKCLISSSLDGTIKVWAYS 326
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 457 ISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
++ L GHN + D L S S+D ++RVWD
Sbjct: 124 VASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWD 159
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 40.7 bits (91), Expect = 9e-04
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 15/204 (7%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
V+ + A V S ++ ++++WD + +R + + L V+GG
Sbjct: 165 VRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTK--LLVAGGT 222
Query: 289 DYKIKVW-NYKQRRCLFTLLGHLDYIRTTF--FHHEYPW---------ILSASDDQTIRI 432
D I W + R LF L G +T F + HE P I S S D ++RI
Sbjct: 223 DGFIHCWKSLDGLRNLFDLTG-FQKEKTEFRLWGHEGPITSLALDMTSIFSGSWDMSVRI 281
Query: 433 WNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAP-GPAG 609
W+ S +C+ L H+ +V P E L S S V +WD S ++ P G
Sbjct: 282 WDRSSMKCVKTLR-HSDWVW--GLAPHETTLASTS-GSDVYIWDVSSETPLAIIPDAHEG 337
Query: 610 LTEHLRNPQATD-LF-GQADAVVK 675
T L D LF G D +K
Sbjct: 338 TTYSLARSHTGDFLFTGGEDGGIK 361
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Frame = +1
Query: 148 LASLHNGVIQLWDYRMCTLLEKF-DEHDGPVRGICFHIQQPLFVSGGDDYKIKVWN---Y 315
LAS + +WD T L D H+G + +GG+D IK++ Y
Sbjct: 309 LASTSGSDVYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRRY 368
Query: 316 KQRRCLFTLLGHLDYIRTTF-FHHEYPWILSASDD 417
+ + + + + E+PW++SAS D
Sbjct: 369 GSETSVVLISQWMPHTSPVYSLSFEFPWLVSASGD 403
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +1
Query: 322 RRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQ 501
R + TL GH + +RT F + ++ D +R+W+ + + +S+
Sbjct: 152 RYSIDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDME--EGLSIAASKPLGCTIRA 209
Query: 502 FHPTEDLLVSASLDQSVRVW-DFSGLR 579
LLV+ D + W GLR
Sbjct: 210 LAADTKLLVAGGTDGFIHCWKSLDGLR 236
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 40.7 bits (91), Expect = 9e-04
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 13/143 (9%)
Frame = +1
Query: 223 HDGPVRGICFH-IQQPLFVSGGDDYKIKVWNYKQRRCLFTLL--GH-LDYIRTTFFHHEY 390
H+ V + F F S GDD + +W+ + T + H D + H+
Sbjct: 291 HEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDD 350
Query: 391 PWILSASDDQTIRIWNWQSRQCISV------LTGHNHYVMCAQFHPTEDLLVSASL-DQS 549
IL+ S D T+R+++ + V GH V+C Q+ P + + +S D
Sbjct: 351 NLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGL 410
Query: 550 VRVWDFSGLRKKS--VAPGPAGL 612
+ +WD+ + KKS A PAGL
Sbjct: 411 LNIWDYDRVSKKSDRAAKSPAGL 433
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 40.7 bits (91), Expect = 9e-04
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +1
Query: 244 ICFHIQQPLFVSGGDDYKIKVW--NYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDD 417
I + I LF++G D+ +KVW N Q F + G + + + I + ++D
Sbjct: 110 IWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTED 169
Query: 418 QTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTED-LLVSASLDQSVRVWD 564
+R+ + S L+GH VM ++ + + +L + D ++R WD
Sbjct: 170 VQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWD 219
Score = 33.1 bits (72), Expect = 0.17
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 3/171 (1%)
Frame = +1
Query: 70 IKMLKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGIC 249
+K L+ +T S VKG S AK AS+ + M + L++ H G V G+
Sbjct: 266 LKTLQSKQTGSQSVKGSS-SAK-----ASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLK 319
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQ-RRCLFTL-LGHLDYIR-TTFFHHEYPWILSASDDQ 420
+S G D +I++W+ + R L G + + + P ++ +
Sbjct: 320 ATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDPALVFVPCMK 379
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
T++ + S + +L GH V F+ + L ++ D+ + VW G
Sbjct: 380 TVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWSPGG 430
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Frame = +1
Query: 214 FDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFF-HHEY 390
F +++ + I FH V+ DD I++++ CL T+ + F H
Sbjct: 29 FRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPT 88
Query: 391 PWILSASD--DQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
I S+ + D ++R+ + + + GH+ V+ + +S SLD++V +WD
Sbjct: 89 TVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF--HIQ 261
F + R+ I FH ++ + + I+L+D T L+ + V +CF H
Sbjct: 29 FRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPT 88
Query: 262 QPLFVS-GGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
++ S G D +++ + + L GH D + + +S S D+T+ +W+
Sbjct: 89 TVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
Query: 439 WQSRQCISVL 468
+ +C +L
Sbjct: 149 QRVEKCQGLL 158
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 442 QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
QS + +V +N + FH T +V+AS D S+R++D
Sbjct: 21 QSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYD 61
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Frame = +1
Query: 214 FDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFF-HHEY 390
F +++ + I FH V+ DD I++++ CL T+ + F H
Sbjct: 26 FRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPT 85
Query: 391 PWILSASD--DQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
I S+ + D ++R+ + + + GH+ V+ + +S SLD++V +WD
Sbjct: 86 TVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Frame = +1
Query: 88 FETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICF--HIQ 261
F + R+ I FH ++ + + I+L+D T L+ + V +CF H
Sbjct: 26 FRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPT 85
Query: 262 QPLFVS-GGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
++ S G D +++ + + L GH D + + +S S D+T+ +W+
Sbjct: 86 TVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
Query: 439 WQSRQCISVL 468
+ +C +L
Sbjct: 146 QRVEKCQGLL 155
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 442 QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
QS + +V +N + FH T +V+AS D S+R++D
Sbjct: 18 QSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYD 58
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 16/130 (12%)
Frame = +1
Query: 223 HDG-PVRGICFHIQQPLFVSGGDDYKIKVW--NYKQRRCLFTLLGH---LDY----IRTT 372
HDG PV + FH L + G DY IK+W N Q + + L Y + T
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 373 FFHHEYPWILSASDDQTIRIWNW------QSRQCISVLTGHNHYVMCAQFHPTEDLLVSA 534
F + S +D + IW QS + L+ H V+ Q+ P + L+S
Sbjct: 71 RFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISG 130
Query: 535 SLDQSVRVWD 564
S+D S +WD
Sbjct: 131 SVDNSCIIWD 140
Score = 33.9 bits (74), Expect = 0.099
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 6/119 (5%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGH--LDYIRTTFFHHEYP- 393
H V I F L SG D ++ +W + H L + R ++
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 394 ---WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
+++S S D + IW+ +L H HYV + P + S S D++ R++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVWDF-SGLRKKSV 591
V+ FHP LL +A D +++W SG +K V
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKV 51
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 16/130 (12%)
Frame = +1
Query: 223 HDG-PVRGICFHIQQPLFVSGGDDYKIKVW--NYKQRRCLFTLLGH---LDY----IRTT 372
HDG PV + FH L + G DY IK+W N Q + + L Y + T
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 373 FFHHEYPWILSASDDQTIRIWNW------QSRQCISVLTGHNHYVMCAQFHPTEDLLVSA 534
F + S +D + IW QS + L+ H V+ Q+ P + L+S
Sbjct: 71 RFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISG 130
Query: 535 SLDQSVRVWD 564
S+D S +WD
Sbjct: 131 SVDNSCIIWD 140
Score = 33.9 bits (74), Expect = 0.099
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 6/119 (5%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGH--LDYIRTTFFHHEYP- 393
H V I F L SG D ++ +W + H L + R ++
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 394 ---WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
+++S S D + IW+ +L H HYV + P + S S D++ R++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVWDF-SGLRKKSV 591
V+ FHP LL +A D +++W SG +K V
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKV 51
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 4/133 (3%)
Frame = +1
Query: 178 LWDYRMCTLLEKFDEHDGPVRGICF--HIQQPLFVSGGD-DYKIKVWNYKQRRCLFTLLG 348
+W+ + K+ EH V+ I + H+ L GG D I+ WN L ++
Sbjct: 361 VWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDT 420
Query: 349 HLDYIRTTFFHHEYPWILSASDDQT-IRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
+ + + + Q I +W + + I+ LTGH + V+ P +
Sbjct: 421 CSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTI 480
Query: 526 VSASLDQSVRVWD 564
V+ + D+++R W+
Sbjct: 481 VTGAGDETLRFWN 493
Score = 32.3 bits (70), Expect = 0.30
Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Frame = +1
Query: 205 LEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH 384
+ K H V G+ + SGG+D ++ VWN + + H ++ +
Sbjct: 328 VSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSP 387
Query: 385 EYPWILSA---SDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQS-V 552
+L++ + D+ IR WN + +S + + A +L+ + Q+ +
Sbjct: 388 HVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQI 447
Query: 553 RVWDFSGLRKKSVAPG 600
VW + + K + G
Sbjct: 448 IVWKYPTMSKIATLTG 463
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +1
Query: 277 SGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC 456
+GG D + +W+ + R + GH + + F + + S S D+T+++WN + +
Sbjct: 239 TGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAF 298
Query: 457 ISVLTGHNHYVM 492
I+ GH ++
Sbjct: 299 ITENHGHQGEIL 310
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
++ + D+ + IW+ ++R+ + GH + V C F L S S D++V+VW+
Sbjct: 236 YLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN 292
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGH 351
+ +WD R ++ F H V +CF SG D +KVWN + + + GH
Sbjct: 246 VHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGH 305
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/94 (27%), Positives = 44/94 (46%)
Frame = +1
Query: 187 YRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIR 366
++ T LE H G V CF + + SG D IKVW+ +C TL H+ +
Sbjct: 301 FKYLTSLE--GHHSGEVT--CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVT 356
Query: 367 TTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL 468
+ + ++S+S D TI++W + + V+
Sbjct: 357 SLLCWDK--CLISSSLDGTIKLWACSENESLKVV 388
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
+ S S D+TI++W+ + QC L H V + L+S+SLD ++++W
Sbjct: 325 LYSGSVDKTIKVWDLNTLQCRMTLKQHIGTV--TSLLCWDKCLISSSLDGTIKLW 377
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +1
Query: 316 KQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMC 495
K R L+ + H D + + E + SAS D+TI++W +C+ + H+ V
Sbjct: 196 KHRTALW--IKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVN- 252
Query: 496 AQFHPTEDLLVSASLDQSVRVW 561
+ TE ++ S S D +V+ W
Sbjct: 253 SVVSTTEAIVFSGSADGTVKAW 274
Score = 39.1 bits (87), Expect = 0.003
Identities = 36/140 (25%), Positives = 52/140 (37%), Gaps = 12/140 (8%)
Frame = +1
Query: 187 YRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY-KQRRCLFTLLGHLDYI 363
Y TL++ + + V + G D + W KQ L GH +
Sbjct: 282 YTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHK--L 339
Query: 364 RTTFFHHEYPWILSASDDQTIRIWNWQSR--QCISVLTGHNHYVMCAQFHPTED------ 519
+ S S D+TI +W C+SVLTGH V C +
Sbjct: 340 AVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRD 399
Query: 520 ---LLVSASLDQSVRVWDFS 570
++ S SLD+SV+VW S
Sbjct: 400 KKWIVYSGSLDKSVKVWGVS 419
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +1
Query: 220 EHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWI 399
+H V + + +Q L S D IKVW +CL ++ H D + + E +
Sbjct: 204 KHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTE-AIV 262
Query: 400 LSASDDQTIRIW 435
S S D T++ W
Sbjct: 263 FSGSADGTVKAW 274
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQP-LFVSGGDDYKIKVWNYKQ 321
V+A + I ++D + + H V +CF + L +SG DD KVW+
Sbjct: 244 VVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD--- 300
Query: 322 RRCLF-------TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN 438
RRC L+GHL+ + + + +S DQTI++W+
Sbjct: 301 RRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
+I + S+D ++ I++ S ++VL H+ V +HP L+S+S D + W+F G
Sbjct: 415 YIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFPG 474
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/143 (18%), Positives = 61/143 (42%)
Frame = +1
Query: 166 GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL 345
G ++LWD R +++ E PV Q +++ D +K W+ + +
Sbjct: 168 GGVRLWDVRSGKIVQTL-ETKSPVTSAEVS-QDGRYITTADGSTVKFWDANHFGLVKSYD 225
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
+ + ++ +D +R++++ + + I GH+ V C +F PT +
Sbjct: 226 MPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESY 285
Query: 526 VSASLDQSVRVWDFSGLRKKSVA 594
S S D ++R+W + + ++
Sbjct: 286 ASGSEDGTIRIWQTGPVNPEEIS 308
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+++SAS D + N ++ I GH V + SAS D S ++WD
Sbjct: 33 FLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +1
Query: 277 SGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC 456
SGG +K+W+ +++ C+ L GH I ++ + + S S + + N S
Sbjct: 110 SGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGAR 169
Query: 457 ISVLTGHNHYV--MCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
+ L N V + + LLV+A D +V +WD +G K
Sbjct: 170 ATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPK 214
Score = 33.9 bits (74), Expect = 0.099
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
+I S Q ++IW+ Q + CI L GH + ++ ++ L S S+ + V + +
Sbjct: 107 YICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLAS 166
Query: 574 LRKKSVAPGPAG 609
+ + P G
Sbjct: 167 GARATELKDPNG 178
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = +1
Query: 247 CFHIQQ-PLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSAS-DDQ 420
CF + + +V KI ++N + + T + FH + I++ DD
Sbjct: 829 CFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDS 888
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
TI+I+N + + S L GH+ + F ++LVS+ D + VW+ G K+
Sbjct: 889 TIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQ 943
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL-FV-SGGDDYKIKVWNYKQRRCLFTLL 345
I++WD F+ H+ PV IC H ++ + F+ S D KIK W Y
Sbjct: 488 IKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYE 547
Query: 346 GHLDYIRTTFFHHEYPWILS---ASDDQTIRI-WNWQSRQCISVLTG-HNHYVMCAQFHP 510
+ T + + + S + D ++ + WN G H + QF
Sbjct: 548 APGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDT 607
Query: 511 TEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGL 612
T++ ++A D S++ WD ++ + GL
Sbjct: 608 TKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGL 641
Score = 34.3 bits (75), Expect = 0.075
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNH--YVMCAQFHPTEDLLVSASLDQSVRVW--D 564
+ + DD+TI++W+ + GH Y +C + + S +LD ++ W D
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 565 FSGLRKKSVAPG 600
G R APG
Sbjct: 539 NMGSRVDYEAPG 550
Score = 31.1 bits (67), Expect = 0.70
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +1
Query: 169 VIQLWDYR----MCTLLEKFDEHDGPVRGICFHI--QQPLFVSGGDDYKIKVWNYKQRRC 330
++QL+ Y M LE D H G V I F +Q + GDD IKVW+
Sbjct: 440 IVQLYSYHGGEDMRQHLE-IDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVK 498
Query: 331 LFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIW 435
+T GH + + H++ +I S + D I+ W
Sbjct: 499 RYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = +1
Query: 247 CFHIQQ-PLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSAS-DDQ 420
CF + + +V KI ++N + + T + FH + I++ DD
Sbjct: 829 CFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDS 888
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
TI+I+N + + S L GH+ + F ++LVS+ D + VW+ G K+
Sbjct: 889 TIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQ 943
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPL-FV-SGGDDYKIKVWNYKQRRCLFTLL 345
I++WD F+ H+ PV IC H ++ + F+ S D KIK W Y
Sbjct: 488 IKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYE 547
Query: 346 GHLDYIRTTFFHHEYPWILS---ASDDQTIRI-WNWQSRQCISVLTG-HNHYVMCAQFHP 510
+ T + + + S + D ++ + WN G H + QF
Sbjct: 548 APGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDT 607
Query: 511 TEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGL 612
T++ ++A D S++ WD ++ + GL
Sbjct: 608 TKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGL 641
Score = 34.3 bits (75), Expect = 0.075
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNH--YVMCAQFHPTEDLLVSASLDQSVRVW--D 564
+ + DD+TI++W+ + GH Y +C + + S +LD ++ W D
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 565 FSGLRKKSVAPG 600
G R APG
Sbjct: 539 NMGSRVDYEAPG 550
Score = 31.1 bits (67), Expect = 0.70
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +1
Query: 169 VIQLWDYR----MCTLLEKFDEHDGPVRGICFHI--QQPLFVSGGDDYKIKVWNYKQRRC 330
++QL+ Y M LE D H G V I F +Q + GDD IKVW+
Sbjct: 440 IVQLYSYHGGEDMRQHLE-IDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVK 498
Query: 331 LFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIW 435
+T GH + + H++ +I S + D I+ W
Sbjct: 499 RYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = +1
Query: 217 DEHDGPVR-----GICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTL 342
DE DGP+R I + LFVS GDD +K+W+ RCL T+
Sbjct: 55 DESDGPIRKESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTV 101
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +1
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ----SRQCISVLTGHNHYVMCAQFHPT 513
GH + + ++ + S S DQT RIWN + S+ L GH V + P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 514 E-DLLVSASLDQSVRVWD 564
DL+ +AS D+SVR+WD
Sbjct: 78 HSDLVATASGDKSVRLWD 95
Score = 35.5 bits (78), Expect = 0.033
Identities = 29/128 (22%), Positives = 53/128 (41%)
Frame = +1
Query: 166 GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL 345
G +++ Y L+ H I + F G D + +W+ CL T
Sbjct: 171 GTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFT 230
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
+RT F++ +I SAS+D I I N Q+ + + + + +++P +LL
Sbjct: 231 KLEWPVRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLL 289
Query: 526 VSASLDQS 549
A D++
Sbjct: 290 AYAGDDKN 297
Score = 32.3 bits (70), Expect = 0.30
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +1
Query: 79 LKKFETKSARVKG---ISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGIC 249
LK +T +A G I+ K + + ++ LWD L F + + PVR I
Sbjct: 181 LKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTIS 240
Query: 250 FHIQQPLFVSGGDDYKIKVWNYKQRR 327
F+ S +D I + N + R
Sbjct: 241 FNYSGEYIASASEDLFIDIANVQTGR 266
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +1
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGL 576
T+ + ++ S + + LT H C P S D V +WD S +
Sbjct: 172 TVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDM 223
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLF-TLLGHLDYIRTTFFHHEYPWI 399
H+G + I + + VS DD ++W + + L GH +R I
Sbjct: 234 HEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGH--SVRVWDCCISDSLI 291
Query: 400 LSASDDQTIRIWNWQSRQCISVLTGH-NHYVMCAQFHPTEDLLVSASLDQSVRV 558
++A +D T R+W Q + V+ H + + P LLV+A D +++V
Sbjct: 292 VTAGEDCTCRVWGVDGTQ-LEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKV 344
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 331 LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCIS-VLTGHNHYVMCAQFH 507
+ L GH I + + I+S SDD++ RIW S++ + VL GH+ V
Sbjct: 228 MLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI- 286
Query: 508 PTEDLLVSASLDQSVRVWDFSG 573
++ L+V+A D + RVW G
Sbjct: 287 -SDSLIVTAGEDCTCRVWGVDG 307
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLF-TLLGHLDYIRTTFFHHEYPWI 399
H+G + I + + VS DD ++W + + L GH +R I
Sbjct: 234 HEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGH--SVRVWDCCISDSLI 291
Query: 400 LSASDDQTIRIWNWQSRQCISVLTGH-NHYVMCAQFHPTEDLLVSASLDQSVRV 558
++A +D T R+W Q + V+ H + + P LLV+A D +++V
Sbjct: 292 VTAGEDCTCRVWGVDGTQ-LEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKV 344
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 331 LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCIS-VLTGHNHYVMCAQFH 507
+ L GH I + + I+S SDD++ RIW S++ + VL GH+ V
Sbjct: 228 MLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI- 286
Query: 508 PTEDLLVSASLDQSVRVWDFSG 573
++ L+V+A D + RVW G
Sbjct: 287 -SDSLIVTAGEDCTCRVWGVDG 307
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYV--M 492
+RR + H D + + E + S S D+T+++W +C+ + H+ + +
Sbjct: 238 RRRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTV 297
Query: 493 CAQFHPTEDLLVSASLDQSVRVW 561
A F +DLL + S D +++VW
Sbjct: 298 AAGF---DDLLFTGSADGTLKVW 317
Score = 36.3 bits (80), Expect = 0.019
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ- 444
L SG D +KVW +CL ++ H D I T + + + S D T+++W +
Sbjct: 263 LLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKVWKREL 321
Query: 445 -----SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
++VL + V + T ++ S D +V W+
Sbjct: 322 QGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFWE 366
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Frame = +1
Query: 208 EKFDEHDGPVRG-----ICFHIQQPLFVSGGDDYKIKVWNYK---QRRCLFTLLGHLDYI 363
+K+ H G +RG +C L +SGG D I VW CL L+ H+ +
Sbjct: 368 QKYLSHGGTLRGHRLAVLCLAAAGSLVLSGGADKNICVWRRNGDGSHSCLSVLMDHVGPV 427
Query: 364 RTTFF-------HHE---YPWIL-SASDDQTIRIW 435
+ H E WI+ S S D+++++W
Sbjct: 428 KCLTAVEDDGEGHREKGDQKWIVYSGSLDKSVKVW 462
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQ---SRQCISVLTGHNHYVMC-------AQFHPTED----LLVSA 534
+LS D+ I +W S C+SVL H V C + H + ++ S
Sbjct: 394 VLSGGADKNICVWRRNGDGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREKGDQKWIVYSG 453
Query: 535 SLDQSVRVW 561
SLD+SV+VW
Sbjct: 454 SLDKSVKVW 462
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
GH + ++ E + S + D T +W + + + GHN V C L
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 526 VSASLDQSVRVWD 564
++ S DQ+ ++WD
Sbjct: 68 ITGSADQTAKLWD 80
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 444
VSGG+D I++W+ + + L +GH I + + L+ S D+T ++W+ +
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 445 SRQCISVLT 471
+ + T
Sbjct: 224 TLTLLKTYT 232
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
GH + ++ E + S + D T +W + + + GHN V C L
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 526 VSASLDQSVRVWD 564
++ S DQ+ ++WD
Sbjct: 68 ITGSADQTAKLWD 80
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 444
VSGG+D I++W+ + + L +GH I + + L+ S D+T ++W+ +
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 445 SRQCISVLT 471
+ + T
Sbjct: 224 TLTLLKTYT 232
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
GH + ++ E + S + D T +W + + + GHN V C L
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 526 VSASLDQSVRVWD 564
++ S DQ+ ++WD
Sbjct: 68 ITGSADQTAKLWD 80
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 444
VSGG+D I++W+ + + L +GH I + + L+ S D+T ++W+ +
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 445 SRQCISVLT 471
+ + T
Sbjct: 224 TLTLLKTYT 232
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 38.3 bits (85), Expect = 0.005
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKF-DEHDGPVRGICFHIQQPLFVSGGDDYKIKVW-------NYKQRR 327
+++W LE F + HD + + ++ +G D +IKVW N K++R
Sbjct: 189 LKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY-TGSSDQRIKVWRKNINEENVKKKR 247
Query: 328 --CLFTLLG-HLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRQCISV---LTGHNHY 486
L +L H I +L S D +I +W I V L GH
Sbjct: 248 KHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTES 307
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVWDFS 570
V+C D+L S S D++VR+W S
Sbjct: 308 VLCLAV--VSDILCSGSADKTVRLWKCS 333
Score = 35.9 bits (79), Expect = 0.025
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 14/138 (10%)
Frame = +1
Query: 190 RMCTLLEKFDEHDGPVRGICFH-IQQPLFVSGGDDYKIKVWNYKQRRCLFT---LLGHLD 357
R +L+ EH+ + + L SGG D I VW + L GH +
Sbjct: 247 RKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTE 306
Query: 358 YIRTTFFHHEYPWILSASDDQTIRIWNWQSR--QCISVLTGHNHYVMC--AQFHPTEDL- 522
+ + + S S D+T+R+W ++ C+++L GH V C F +
Sbjct: 307 SVLCLAVVSDI--LCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKAD 364
Query: 523 -----LVSASLDQSVRVW 561
+ S LD V+VW
Sbjct: 365 EASYHIYSGGLDSQVKVW 382
Score = 33.9 bits (74), Expect = 0.099
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +1
Query: 349 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLT-GHNHYVMCAQFHPTEDLL 525
H+D + + + S S D+T++IW +C+ T H+ + D+
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 526 VSASLDQSVRVW----DFSGLRKKSVAPGPAGLTEHLRNPQATDLFG 654
+S DQ ++VW + ++KK A L+EH A L G
Sbjct: 224 TGSS-DQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSG 269
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSG 573
WI + R+++ + IS H+ YV P LLVS+SLD+++R+WD
Sbjct: 426 WIAAGFSSGQCRLFDLRENGFISSWRAHDGYVT-KLVAPESHLLVSSSLDKTLRIWDL-- 482
Query: 574 LRKKSVAPGPAGLTEHLRNPQATDLFGQ 657
+KS P P + H ++G+
Sbjct: 483 --RKSWTPQPFVVKGHNDGVSGFSIWGK 508
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 142 WVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
W+ A +G +L+D R + + HDG V + + L VS D +++W+ ++
Sbjct: 426 WIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKLVAP-ESHLLVSSSLDKTLRIWDLRK 484
Query: 322 RRC--LFTLLGHLD 357
F + GH D
Sbjct: 485 SWTPQPFVVKGHND 498
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +1
Query: 85 KFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGI 246
KFET + K H P V+A+ N I++W+Y TLL FD +D P +GI
Sbjct: 1017 KFETGT---KTALLHPFSPIVVAADENERIRVWNYEEATLLNGFDNNDFPDKGI 1067
Score = 27.5 bits (58), Expect = 8.6
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = +1
Query: 364 RTTFFHHEYPWILSASDDQTIRIWNWQ 444
+T H P +++A +++ IR+WN++
Sbjct: 1023 KTALLHPFSPIVVAADENERIRVWNYE 1049
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/166 (18%), Positives = 70/166 (42%), Gaps = 4/166 (2%)
Frame = +1
Query: 79 LKKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHI 258
+ K + + + G+ + + + + ++ + +W+ + +F EH V+ I +
Sbjct: 285 VSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSP 344
Query: 259 QQ-PLFVSGGD--DYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQT-I 426
L SGG D I+ WN L + + + + + + Q I
Sbjct: 345 HHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQI 404
Query: 427 RIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+W + + ++ LTGH++ V+ P +V+ + D+++R W+
Sbjct: 405 IVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWN 450
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-RQCISVLTGHNHYVMCAQFHP-T 513
L GH + F+ ++S SDD+ I +WNW S + +S +GH V +F P T
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 514 ED-LLVSASLDQSVRV 558
+D ++++ D VR+
Sbjct: 111 DDRTIITSGADGQVRL 126
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 466 LTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDF-SGLRKKSVAPG 600
L GH V +F+ T D+LVS S D+ + +W++ SG RK S G
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSG 96
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 373 FFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSV 552
FF ++ S SD I IW + + + + G V + HP LL S +++SV
Sbjct: 328 FFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIPLLASCGIEKSV 387
Query: 553 RVW 561
++W
Sbjct: 388 KLW 390
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 202 LLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY-KQRRCLFTLLGHLDYIRTTFF 378
L K + H+G V + F+ + VSG DD +I +WN+ R L GH + + T F
Sbjct: 47 LYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKF 106
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 235 VRGICFHIQQPLFVSGGDDY-KIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSAS 411
V+G+ F +V+ G D I +W K + + ++G + H P + S
Sbjct: 323 VKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIPLLASCG 382
Query: 412 DDQTIRIWNWQSRQCISV 465
++++++W S +S+
Sbjct: 383 IEKSVKLWTPMSNDVLSL 400
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/145 (20%), Positives = 59/145 (40%)
Frame = +1
Query: 127 HAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKV 306
H+ + + G I+LWD R ++ E PV Q +++ D +K
Sbjct: 150 HSDNTILSSCTDTGDIRLWDIRSDKIVHTL-ETKSPVTSAEVS-QDGRYITTADGSSVKF 207
Query: 307 WNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHY 486
W+ K L + + + ++ +D + +++Q+ + I GH+
Sbjct: 208 WDAKNFGLLKSYDMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGP 267
Query: 487 VMCAQFHPTEDLLVSASLDQSVRVW 561
V C ++ P + S S D +VR+W
Sbjct: 268 VHCVRYAPGGESYTSGSEDGTVRIW 292
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+++SAS D + N ++ I GH V SAS D + ++W+
Sbjct: 28 FLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWN 84
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 37.9 bits (84), Expect = 0.006
Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 7/158 (4%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
V +S + + +S + I++W LE HD + + +F +G
Sbjct: 238 VSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVF-TGSA 296
Query: 289 DYKIKVWNYK------QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 450
D +KVW + + LL + + + + S D + W R
Sbjct: 297 DGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKR 356
Query: 451 QCI-SVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
+L GH V+C +LL+S S D+++ VW
Sbjct: 357 SFTGGILKGHKSAVLCLGI--AGNLLLSGSADKNICVW 392
Score = 37.1 bits (82), Expect = 0.011
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Frame = +1
Query: 199 TLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL-GHLDYIRTTF 375
TL + + + V + Q + G D + W +R +L GH +
Sbjct: 315 TLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLG 374
Query: 376 FHHEYPWILSASDDQTIRIWNW----QSRQCISVLTGHNHYVMCAQFHPTEDLL--VSAS 537
+LS S D+ I +W +S QC+SVLTGH V C AS
Sbjct: 375 IAGNL--LLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCLAVEEERACHQGAKAS 432
Query: 538 LDQSVRVW-DFSGLRKKSV 591
+ + R W +SG KSV
Sbjct: 433 VAEGDRKWIIYSGSLDKSV 451
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 220 EHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWI 399
+H+ V + ++ L S D IKVW +CL ++ H D I + + +
Sbjct: 233 KHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFD-DLV 291
Query: 400 LSASDDQTIRIW 435
+ S D T+++W
Sbjct: 292 FTGSADGTVKVW 303
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 349 HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLV 528
H D + + E + S+S D TI++W +C+ + H+ + + +DL+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAIN-SVMSGFDDLVF 292
Query: 529 SASLDQSVRVW 561
+ S D +V+VW
Sbjct: 293 TGSADGTVKVW 303
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 379 HHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRV 558
+ EY + + S D TI+ W+ Q + ++GH V + +L S S D +VR+
Sbjct: 594 YSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVV--STLVVVNGVLYSGSWDGTVRL 651
Query: 559 WDFS 570
W S
Sbjct: 652 WSLS 655
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 277 SGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC 456
+G D IK W+ + L T+ GH + T + + S S D T+R+W+
Sbjct: 602 TGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGV--LYSGSWDGTVRLWSLSDNSL 659
Query: 457 ISVL 468
++VL
Sbjct: 660 LTVL 663
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/132 (20%), Positives = 56/132 (42%)
Frame = +1
Query: 166 GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL 345
G ++LWD R +++ E PV Q +++ D +K W+ + +
Sbjct: 168 GGVRLWDVRSGKIVQTL-ETKSPVTSAEVS-QDGRYITTADGSTVKFWDANHFGLVKSYD 225
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
+ + ++ +D +R++++ + + I GH+ V C +F PT
Sbjct: 226 MPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSY 285
Query: 526 VSASLDQSVRVW 561
S S D ++R+W
Sbjct: 286 ASGSEDGTIRIW 297
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+++SAS D + N ++ I GH V + SAS D S ++WD
Sbjct: 33 FLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/132 (20%), Positives = 56/132 (42%)
Frame = +1
Query: 166 GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLL 345
G ++LWD R +++ E PV Q +++ D +K W+ + +
Sbjct: 168 GGVRLWDVRSGKIVQTL-ETKSPVTSAEVS-QDGRYITTADGSTVKFWDANHFGLVKSYD 225
Query: 346 GHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLL 525
+ + ++ +D +R++++ + + I GH+ V C +F PT
Sbjct: 226 MPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSY 285
Query: 526 VSASLDQSVRVW 561
S S D ++R+W
Sbjct: 286 ASGSEDGTIRIW 297
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+++SAS D + N ++ I GH V + SAS D S ++WD
Sbjct: 33 FLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ- 444
L SG D +KVW +CL ++ H D + T + + + S D T+++W +
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKVWKREV 317
Query: 445 -----SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ VL + V + T+ ++ S D +V W+
Sbjct: 318 QGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE 362
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +1
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCA 498
+RR + H D + + + + S S D+T+++W +C+ + H+ V
Sbjct: 234 RRRKNVLKIRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV 293
Query: 499 QFHPTEDLLVSASLDQSVRVW 561
+DL+ + S D +++VW
Sbjct: 294 -VSGFDDLVFTGSADGTLKVW 313
Score = 31.1 bits (67), Expect = 0.70
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 7/141 (4%)
Frame = +1
Query: 172 IQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNY----KQRRCLFT 339
+++W LE + HD V + +F +G D +KVW K+ + +
Sbjct: 269 LKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLVF-TGSADGTLKVWKREVQGKEMKHVLV 327
Query: 340 --LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCIS-VLTGHNHYVMCAQFHP 510
L+ + + + + S D T+ W Q + GH V+C
Sbjct: 328 QVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLTHKGTIHGHRMAVLCLA--T 385
Query: 511 TEDLLVSASLDQSVRVWDFSG 573
LL+S D+++ VW +G
Sbjct: 386 AGSLLLSGGADKNICVWKRNG 406
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYK---QRRCL 333
+G + W+ R L K H + +C L +SGG D I VW CL
Sbjct: 355 DGTVNFWE-RQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSHTCL 413
Query: 334 FTLLGH 351
L+ H
Sbjct: 414 SVLMDH 419
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 460 SVLTGHNHYVMCAQFHPTE-DLLVSASLDQSVRVWDFSGLRKKSV 591
+V+ H+ V C +FHPT+ ++L+S + VWDF + +K+V
Sbjct: 165 AVIRYHSRRVTCLEFHPTKNNILLSGDKKGQIGVWDFGKVYEKNV 209
Score = 33.9 bits (74), Expect = 0.099
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Frame = +1
Query: 115 GISFHAKRPWVLASLHNGVIQLWDYRMCTLLEK---FDEHDGPVRGI-CFHIQQPLFVSG 282
G+ ++++ VLA+ + G + + D+R + + V G+ C +Q L +S
Sbjct: 272 GMDINSEKGVVLAADNFGFLHMIDHRTNNSTGEPILIHKQGSKVCGLDCNPVQPELLLSC 331
Query: 283 GDDYKIKVWNYKQRRCLFTL--LGHLDYIRTTFFH-HEYPWILSASDDQTIRIWN 438
G+D+ ++W+ ++ + +L L H + + +F IL+ D IRIW+
Sbjct: 332 GNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRIWD 386
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 37.1 bits (82), Expect = 0.011
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQP-LFVSGGDDYK-IKVWNYK 318
+ +S +GV+Q+WD L+ + EH V I P L SG DD + + K
Sbjct: 599 IASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTGVSIGTIK 658
Query: 319 QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQC-ISVLTGHNHYVMC 495
+ + + D R+ F S D + ++ ++ + + + GH+ V
Sbjct: 659 TKANVCCVQFPSDSGRSLAF---------GSADHKVYYYDLRNPKIPLCTMIGHSKTVSY 709
Query: 496 AQFHPTEDLLVSASLDQSVRVWDFS 570
+F + L VS+S D ++++WD S
Sbjct: 710 VKFVDSSTL-VSSSTDNTLKLWDLS 733
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 166 GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
G + +W L + H GPV + FH L + G + KIK+W+ ++
Sbjct: 261 GTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRK 312
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +1
Query: 421 TIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
T+ +W S+ + + H V FHP L+ ++ ++ +++WD
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWD 309
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 37.1 bits (82), Expect = 0.011
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQR 324
V+ + ++ ++L+D LL +F H V I L GD + + +
Sbjct: 251 VMTANNDCTVRLFDATNFALLNRFAFH-WSVNNISTSPDGKLVAVLGDSPECLLADTGSG 309
Query: 325 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-RQCISVLTGHNHYVMCAQ 501
+ + L GHLDY ++ +H + + + D T R+W+ ++ Q + VL G+ + +
Sbjct: 310 KVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALR 369
Query: 502 FHPTEDLLVSASLDQSVRVWD 564
F L A V ++D
Sbjct: 370 FTSDGRFLAMAEPADFVHLFD 390
Score = 33.9 bits (74), Expect = 0.099
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 445 SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK-SVAPGPAGLTEH 621
S + I L GH Y + +HP +L + + D + R+WD L + V G G
Sbjct: 308 SGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRA 367
Query: 622 LR 627
LR
Sbjct: 368 LR 369
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 13/68 (19%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSR--QCISVLTGHNHYVMC-AQFHPT----ED------LLVSAS 537
+ S + D+ I +W + + C+SVLTGH V C A P+ ED +L S S
Sbjct: 279 LFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGS 338
Query: 538 LDQSVRVW 561
LD+SV+VW
Sbjct: 339 LDKSVKVW 346
Score = 36.7 bits (81), Expect = 0.014
Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 2/173 (1%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRC-LFT 339
N I++W + F + G V+ I + +F +G D KI+VW + ++T
Sbjct: 43 NNYIRVW--KNLNEFSGFKSNSGLVKAIVISREAKVF-TGHQDGKIRVWKTSSKNPRVYT 99
Query: 340 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVL-TGHNHYVMCAQFHPTE 516
G L ++ +L +S + + + R+C + L H+ V C +
Sbjct: 100 RAGSLPALKD---------VLKSSVKPSNYV---EVRRCRTALWIKHSDAVSCLSLAEDQ 147
Query: 517 DLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHLRNPQATDLFGQADAVVK 675
LL SAS D++V+VW L+ + ++ G AD VK
Sbjct: 148 GLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAESLVFTGSADGTVK 200
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 211 KFDE--HDGPVRGICFHIQ-QPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFH 381
KF E H V G+ ++ + + + S D K+KVW+ C T+ H ++ ++
Sbjct: 258 KFKEGSHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 317
Query: 382 HEYPWI-LSASDDQTI 426
H P + LS S DQT+
Sbjct: 318 HYAPEVLLSGSFDQTV 333
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 316 KQRRCLFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWNWQSRQCISVLTGHNHYVM 492
K+++ F H + + ++ E+ IL SAS D+ +++W+ + C + H V
Sbjct: 253 KKQKPKFKEGSHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQ 312
Query: 493 CAQF-HPTEDLLVSASLDQSVRVWD 564
+ H ++L+S S DQ+V + D
Sbjct: 313 AVAWNHYAPEVLLSGSFDQTVVMKD 337
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 511 TEDLLVSASLDQSVRVWDFSGLRKKSVA 594
T +LL + S+D+SV++WD S +A
Sbjct: 416 TPNLLATGSMDKSVKLWDLSNNEPSCIA 443
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 307 WNYKQRRCLFTLLG--HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHN 480
+N+ +R LG HLD I + + S S D+T ++W +C+ + H
Sbjct: 194 FNFTRRNRSSAALGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHE 253
Query: 481 HYVMCAQFHPTEDLLVSASLDQSVRVW 561
V A + L+ + S D +V+VW
Sbjct: 254 DAVN-AVVSGFDGLVFTGSADGTVKVW 279
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 12/70 (17%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQS----RQCISVLTGHNHYVMCAQFHPTED--------LLVSASL 540
+ S S D IR+W C+SVLTGH V C ++ ++ S SL
Sbjct: 356 MFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYSGSL 415
Query: 541 DQSVRVWDFS 570
D+SV++W S
Sbjct: 416 DRSVKMWRVS 425
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
L SG D KVW RC+ ++ H D + + + + S D T+++W
Sbjct: 225 LLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFD-GLVFTGSADGTVKVW 279
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 361 IRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASL 540
I+ ++E +++ I +W + + + GH V C F + LLVS S
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 541 DQSVRVW 561
D S+RVW
Sbjct: 141 DGSIRVW 147
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
+K ++ + + +++ +G I LW+ LL+K+ H V + F L VSG
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 289 DYKIKVWN 312
D I+VW+
Sbjct: 141 DGSIRVWS 148
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 13/126 (10%)
Frame = +1
Query: 232 PVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSAS 411
P++ + + + V GG I +W + L GH + F + ++S S
Sbjct: 80 PIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGS 139
Query: 412 DDQTIRIWNW------QSRQCISVLTGHN---HYV----MCAQFHPTEDLLVSASLDQSV 552
D +IR+W+ RQ + L HN H + + + +++S+S D++
Sbjct: 140 QDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTC 199
Query: 553 RVWDFS 570
+VW S
Sbjct: 200 KVWSLS 205
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H+ V + ++ + SG D +K+W+ +QR C H DYI F + ++
Sbjct: 36 HEDAVNTL-INVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLV 94
Query: 403 SASDDQTIRIWN 438
S D T+ + N
Sbjct: 95 VTSGDGTLSVCN 106
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRV 558
I S D ++IW+ + R C H Y+ F LV S D ++ V
Sbjct: 51 IASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSV 104
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/59 (20%), Positives = 25/59 (42%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
++ NG+I L +++ HD P+ + + S D +K+WN ++
Sbjct: 178 LITGCDNGIISLVGILPNRIIQPIGSHDYPIEDLALSHDKKFLGSTAHDSMLKLWNLEE 236
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +1
Query: 223 HDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWIL 402
H+ V + ++ + SG D +K+W+ +QR C H DYI F + ++
Sbjct: 93 HEDAVNTL-INVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLV 151
Query: 403 SASDDQTIRIWN 438
S D T+ + N
Sbjct: 152 VTSGDGTLSVCN 163
Score = 35.5 bits (78), Expect = 0.033
Identities = 39/156 (25%), Positives = 56/156 (35%), Gaps = 4/156 (2%)
Frame = +1
Query: 103 ARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLL---EKFDEHDGPVRGICFHIQQPLF 273
A GI FH V A L +G + L+ Y + L K H R + F
Sbjct: 7 ANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDGQRI 66
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 450
V+ D I + + + L H D + T E I S D ++IW+ + R
Sbjct: 67 VTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETT-IASGDDKGCVKIWDTRQR 125
Query: 451 QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRV 558
C H Y+ F LV S D ++ V
Sbjct: 126 SCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSV 161
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/59 (20%), Positives = 25/59 (42%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
++ NG+I L +++ HD P+ + + S D +K+WN ++
Sbjct: 235 LITGCDNGIISLVGILPNRIIQPIGSHDYPIEDLALSHDKKFLGSTAHDSMLKLWNLEE 293
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 KFDEHDGPVRGICFHIQ-QPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHE 387
K H V G+ ++ + + + S D K+KVW+ C T+ H ++ ++H
Sbjct: 228 KQGSHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHY 287
Query: 388 YPWI-LSASDDQTI 426
P + LS S DQT+
Sbjct: 288 APEVLLSGSFDQTV 301
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQF-HPTEDLLVSASLDQSVRVWD 564
+ SAS D+ +++W+ + C + H V + H ++L+S S DQ+V + D
Sbjct: 249 LASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKD 305
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ S + D T +W + + + GH+ V C L++ S DQ+ ++WD
Sbjct: 52 LFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWD 107
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 444
VSGG+D I++W+ + + L +GH + I + + L+ S D+T ++W+ +
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMR 250
Query: 445 SRQCISVLT 471
+ I T
Sbjct: 251 TLTLIKTYT 259
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = +1
Query: 175 QLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHL 354
Q + RM +L K H+ P+ + ++ L S D+ VW L T GH
Sbjct: 22 QTLETRMRPILMK--GHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHS 79
Query: 355 DYIRTTFFHHEYPWILSASDDQTIRIWNWQS 447
+ + +++ S DQT ++W+ +S
Sbjct: 80 GAVWCCDISRDSSRLITGSADQTAKLWDVKS 110
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 328 CLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFH 507
C GH + + WI S S D ++R+W ++ +C+ V + +MC ++
Sbjct: 415 CYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQ-FDEAIMCVAWN 473
Query: 508 PTEDLLVSA 534
P L V A
Sbjct: 474 PLSRLPVLA 482
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Frame = +1
Query: 337 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRQCIS---------VLTGHNHY- 486
TL H I H YP S S+D T +++ ++ +L GH+
Sbjct: 666 TLKNHPKDITNVAVHRSYPLFASCSEDSTAYVFHGMVYNDLNQNPLIVPLEILRGHSSKG 725
Query: 487 -VMCAQFHPTEDLLVSASLDQSVRVW 561
V+ +FHP + L +A D ++++
Sbjct: 726 GVLDCKFHPRQPWLFTAGADSIIKLY 751
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 325 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-RQCISVLTGHNHYVMCAQ 501
+ L TL GHLD+ + +H + + + D+T R+W+ ++ Q ++VL G+ + +
Sbjct: 310 KTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIR 369
Query: 502 FHPTEDLLVSASLDQSVRVWDFS 570
+ + A V V+D S
Sbjct: 370 YTSDGKYMAMAEPADFVHVYDVS 392
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 457 ISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK-SVAPGPAGLTEHLR 627
+ L+GH + + +HP + + D++ RVWD L + +V G G +R
Sbjct: 312 LETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIR 369
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 35.1 bits (77), Expect = 0.043
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNH--YVMCAQFHPTEDLLVSASLDQSVRVW--D 564
+++ DD+ I++W+ R+ + GH+ Y +C + + S ++D ++ W D
Sbjct: 469 VITCGDDKLIKVWDVSGRKHFT-FEGHDAPVYSICPHYKENIQFIFSTAIDGKIKAWLYD 527
Query: 565 FSGLRKKSVAPGPAGLTEHLRNPQATDLF 651
G R APG T L + T LF
Sbjct: 528 NLGSRVDYDAPG-KWCTRMLYSADGTRLF 555
Score = 33.9 bits (74), Expect = 0.099
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 412 DDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK-KS 588
+D TI I+N + + S L GH + F ++LVS+ D + W K KS
Sbjct: 882 EDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRKS 941
Query: 589 VA-PGPAG 609
VA PAG
Sbjct: 942 VAIQMPAG 949
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +1
Query: 211 KFDEHDGPVRGICFHI--QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH 384
+ D H G V + F +Q ++ GDD IKVW+ R+ FT GH + + H+
Sbjct: 447 EIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRK-HFTFEGHDAPVYSICPHY 505
Query: 385 E--YPWILSASDDQTIRIW 435
+ +I S + D I+ W
Sbjct: 506 KENIQFIFSTAIDGKIKAW 524
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 214 FDEHDGPVRGICFHIQQPL-FV-SGGDDYKIKVWNY 315
F+ HD PV IC H ++ + F+ S D KIK W Y
Sbjct: 491 FEGHDAPVYSICPHYKENIQFIFSTAIDGKIKAWLY 526
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Frame = +1
Query: 118 ISFHAKRPWVLA-SLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDY 294
++FH + V+A + + I +++ R+ + K H + G+ F + VS G D
Sbjct: 867 LAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADA 926
Query: 295 KIKVWN---YKQRRCLFTLLG-------------HLDYIRTTFFHHEYPWILSASDDQTI 426
+I W+ +++R+ + + H+D +R H + AS + I
Sbjct: 927 QICFWSIDTWEKRKSVAIQMPAGKAANGDTRVQFHVDQLRILVVHETQLAVFDASKMECI 986
Query: 427 RIW 435
R W
Sbjct: 987 RQW 989
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 35.1 bits (77), Expect = 0.043
Identities = 23/124 (18%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Frame = +1
Query: 211 KFDEHDGPVRGICFHIQQPL-FVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHE 387
+FD H V +P V+ G+D+ + + + + H +++ F +
Sbjct: 139 EFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPD 198
Query: 388 YPWILSASDDQTIRIWNWQSRQCISVLT---GHNHYVMCAQFHPTEDLLVSASLDQSVRV 558
++ S D+ I++ ++ + + L+ GH + + P +++ S D+S ++
Sbjct: 199 GSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKI 258
Query: 559 WDFS 570
WD S
Sbjct: 259 WDIS 262
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 415 DQTIRIWN----WQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRK 582
D +I+IW+ W SR I V H + +F +L+S S D S++VWD +++
Sbjct: 348 DGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKE 407
Score = 33.5 bits (73), Expect = 0.13
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYR----MCTLLEKFDEHDG--PVRGICFHIQQPLFVSGGDDYKIKV 306
VL S +G +++WD +++ G PV + G D I++
Sbjct: 294 VLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQI 353
Query: 307 WNYK----QRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNW-QSRQCISVLT 471
W+ K R ++ H D I + F + +LS S D ++++W+ Q ++ + V
Sbjct: 354 WSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFE 413
Query: 472 G-HNHYVMC-AQFHPTEDLLVSAS 537
G N+Y F P E ++++ +
Sbjct: 414 GLPNYYPQTNVAFSPDEQIILTGT 437
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +1
Query: 247 CFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 426
C + + SG D +KVW +CL ++ H D I + SAS D +
Sbjct: 179 CLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGR--VYSASADGKV 236
Query: 427 RIWNWQSRQCI 459
+IW + R+ I
Sbjct: 237 KIWGKEKRKQI 247
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGL 576
I S S D+T+++W +C+ + H+ + + + SAS D V++W G
Sbjct: 187 IYSGSWDKTLKVWRLSDLKCLESIKAHDDAI--NGLVAGDGRVYSASADGKVKIW---GK 241
Query: 577 RKKSVAPGPAGLTEHLRNPQATDLFGQADAVV 672
K+ + + L +AT L G+A+ V
Sbjct: 242 EKRKQIESTSSSSSSLHVLKAT-LEGRAEVSV 272
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 367 TTFFHHEYPWILSASDDQTIRIWNWQSRQCISV--LTGHNHYVMCAQFHPTEDLLVSASL 540
T +H+ + S D +IR+WN + + + H V C T + ++S S
Sbjct: 857 TALIYHK-GLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSA 915
Query: 541 DQSVRVW 561
D+++RVW
Sbjct: 916 DKTIRVW 922
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 91 ETKSARVKGISFHAKRPWVLASLHNGVIQLWDY--RMCTLLEKFDEHDGPVRGICFHIQQ 264
++ S V + +H + + + +G I++W+ ++ TLL EH V CF + +
Sbjct: 850 QSGSGAVTALIYH--KGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVT--CFSLSE 905
Query: 265 P--LFVSGGDDYKIKVW 309
+SG D I+VW
Sbjct: 906 TGECVLSGSADKTIRVW 922
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 34.7 bits (76), Expect = 0.057
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +1
Query: 274 VSGGDDYKIKVWNYKQRRCLFTLLGH--LDY-IRTTFFHHEYPWILSASDDQTIRIWNWQ 444
++ +D KI+V++ + FT + LD+ + T + + D I +
Sbjct: 223 ITANNDCKIRVFDAQS----FTRVSEFALDWSVNNTSVSPDGKLLAVVGDSTECLISDSH 278
Query: 445 SRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
S + IS L GH Y + +HP +L + + D + R+WD
Sbjct: 279 SGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWD 318
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 34.3 bits (75), Expect = 0.075
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +1
Query: 271 FVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 450
F++ +D ++ ++ ++ + L L +L + + + + DD + + +
Sbjct: 251 FMASNNDCGVRDFDMERYK-LVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNG 309
Query: 451 QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK-SVAPGPAGLTEHLR 627
Q I L GH Y + +HP + + D++ R+WD L + +V G G +R
Sbjct: 310 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 369
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 34.3 bits (75), Expect = 0.075
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +1
Query: 271 FVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSR 450
F++ +D ++ ++ ++ + L L +L + + + + DD + + +
Sbjct: 245 FMASNNDCGVRDFDMERYK-LVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNG 303
Query: 451 QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK-SVAPGPAGLTEHLR 627
Q I L GH Y + +HP + + D++ R+WD L + +V G G +R
Sbjct: 304 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 363
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 34.3 bits (75), Expect = 0.075
Identities = 14/92 (15%), Positives = 43/92 (46%)
Frame = +1
Query: 229 GPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSA 408
G + I F + G D ++++++ ++ + + + + + + ++L+
Sbjct: 304 GAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 409 SDDQTIRIWNWQSRQCISVLTGHNHYVMCAQF 504
+D +++W+ + R+ ++ GHN +V F
Sbjct: 364 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/90 (16%), Positives = 41/90 (45%)
Frame = +1
Query: 109 VKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGD 288
+ I+F ++ +G ++++D+ L+ + G + + + ++GG+
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGE 365
Query: 289 DYKIKVWNYKQRRCLFTLLGHLDYIRTTFF 378
D ++VW+ + R+ + GH ++ F
Sbjct: 366 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 33.9 bits (74), Expect = 0.099
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWI-LSASDDQTI 426
+ SG +D K+KVW+ +C T+ H + +++ P + LS S D+T+
Sbjct: 229 IVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTV 282
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 397 ILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHP-TEDLLVSASLDQSVRVWD 564
+ S S+D+ +++W+ + +C + H V ++ T ++L+S S D++V + D
Sbjct: 230 VASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKD 286
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 379 HHEYPWILSASDDQTIRIWNWQSRQCIS--VLTGHNHYVMCAQFH-PTEDLLVSASLDQS 549
H E+ +++S D T++ ++ ++ ++ H+ V ++ +LL + S D+S
Sbjct: 311 HSEHSFVVSLKDG-TVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADES 369
Query: 550 VRVWDFSGLRKKSVA 594
V++WD S + +A
Sbjct: 370 VKLWDLSNNQPSWIA 384
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 394 WILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
+++S S D + IW+ +L H HYV + P + S S D++ R++
Sbjct: 67 YLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +1
Query: 382 HEYPWILSASDDQTIRIWNWQSRQCISV------LTGHNHYVMCAQFHPTEDLLVSASL- 540
H+ IL+ S D T+R+++ ++ V GH V+C Q+ P + + +S
Sbjct: 337 HDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAE 396
Query: 541 DQSVRVWDFSGLRKKS 588
D + +WD + KKS
Sbjct: 397 DGLLNIWDCDRVGKKS 412
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +1
Query: 211 KFDEHDGPVRGICF-HI-QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHH 384
+ D H G V + F H +Q V+ GDD IKVW+ ++ LFT GH + + H
Sbjct: 448 EIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKK-LFTFEGHEAPVYSICPHQ 506
Query: 385 E--YPWILSASDDQTIRIW 435
+ +I S + D I+ W
Sbjct: 507 KENIQFIFSTALDGKIKAW 525
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 412 DDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK 585
+D +I I+N + + + L GH ++ F ++LVS+ D + W KK
Sbjct: 893 EDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEKK 950
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 325 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQS-RQCISVLTGHNHYVMCAQ 501
+ L TL GHLD+ + +H + + + D+T R+W+ ++ + ++VL G+ + +
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIR 367
Query: 502 FHPTEDLLVSASLDQSVRVWDFS 570
+ + A V V+D S
Sbjct: 368 YTSDGKYMAMAEPADFVHVYDVS 390
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 457 ISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKK-SVAPGPAGLTEHLR 627
++ L+GH + + +HP + + D++ RVWD L K +V G G +R
Sbjct: 310 LATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIR 367
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 220 EHDGPVRGICFHIQQP-LFVSGGDDYKIKVWN 312
+H GPVRG+ F+++ P SG DD + +W+
Sbjct: 113 KHKGPVRGLEFNVKSPNQLASGADDGTVCIWD 144
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 223 HDGPVRGICFH-IQQPLFVSGGDDYKIKVWN 312
H GPVRG+ F+ I L SG DD +I +W+
Sbjct: 121 HKGPVRGLEFNAISSNLLASGADDGEICIWD 151
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 223 HDGPVRGICFH-IQQPLFVSGGDDYKIKVWN 312
H GPVRG+ F+ I L SG DD +I +W+
Sbjct: 121 HKGPVRGLEFNAISSNLLASGADDGEICIWD 151
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 466 LTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFS 570
L GH V F P + +++AS D S+RVW+ +
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNIN 319
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/92 (16%), Positives = 42/92 (45%)
Frame = +1
Query: 229 GPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSA 408
G + I F + G D ++++++ ++ + + + + + +IL+
Sbjct: 304 GSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTG 363
Query: 409 SDDQTIRIWNWQSRQCISVLTGHNHYVMCAQF 504
+D +++W+ + R+ ++ GHN +V F
Sbjct: 364 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 31.1 bits (67), Expect = 0.70
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Frame = +1
Query: 214 FDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGH-LDYIRTTFFHHEY 390
F H G V +CF SG D + +WN + R + + GH + + E
Sbjct: 259 FTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRER 318
Query: 391 PWILSASDDQTIRIWNW-----QSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVR 555
+LS D+T++++ +S + I + N C D +S S + S+
Sbjct: 319 --VLSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCC---FVNSDEFLSGSDNGSIA 373
Query: 556 VWDFSGLRKKSV 591
+W S L+KK V
Sbjct: 374 LW--SILKKKPV 383
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/121 (17%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +1
Query: 214 FDEHDGPVRGICFHIQQPLFVSG-GDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEY 390
FD H V F +P ++ G+D+ + ++ + + H +++ + +
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDG 63
Query: 391 PWILSASDDQTIRIWNWQSRQCISVLT---GHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
++ S D+ I++ ++ + L GH + + P +++ S D+S +VW
Sbjct: 64 TKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVW 123
Query: 562 D 564
+
Sbjct: 124 E 124
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCL 333
+G I+ +D T+ + HD I + ++ +S G D KIK W+ +QR L
Sbjct: 74 DGFIRRYDLNAGTV-DTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESL 129
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 163 NGVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCL 333
+G I+ +D T+ + HD I + ++ +S G D KIK W+ +QR L
Sbjct: 74 DGFIRRYDLNAGTV-DTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESL 129
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 451 QCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWD 564
+ ++ L GH V + P D++ S+S D SVR WD
Sbjct: 263 EAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWD 299
>At4g30530.1 68417.m04334 defense-related protein, putative strong
similarity to defense-related protein [Brassica
carinata] GI:14009290; contains Pfam profile PF00117:
glutamine amidotransferase class-I
Length = 250
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 181 WDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGG 285
W ++C +++K DE + GICF Q V GG
Sbjct: 78 WILKLCDIVKKIDEMKKKILGICFGHQIIARVRGG 112
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 376 FHHEYPWILSAS---DDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQ 546
F + W++ S + I IW+ ++ + +L G ++ +HP ++VS SL
Sbjct: 300 FSGDGEWVVGGSACKGEHKIYIWD-RAGHLVKILEGPKEALIDLAWHPVHPIIVSVSLAG 358
Query: 547 SVRVW 561
V +W
Sbjct: 359 LVYIW 363
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 412 DDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
DD +I I SR+ L GH+ + C F ++LVS+ D + +W
Sbjct: 489 DDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLW 538
>At2g23970.1 68415.m02862 defense-related protein, putative similar
to defense-related protein [Brassica carinata]
GI:14009290
Length = 251
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 181 WDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGG 285
W ++C+L +K D+ V GICF Q + GG
Sbjct: 79 WIVKLCSLCQKLDDMKKKVLGICFGHQILSRIKGG 113
>At2g23960.1 68415.m02861 defense-related protein, putative similar
to defense-related protein [Brassica carinata]
GI:14009290
Length = 251
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 181 WDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGG 285
W ++C +++K D+ + V GICF Q GG
Sbjct: 78 WILKLCDIIKKLDDMNKKVLGICFGHQLIARAKGG 112
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 376 FHHEYPWILSASDDQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVR 555
F+ E + + ++D T+R++ W S + + + V C F + LVS R
Sbjct: 161 FNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLVSLG-GPVCR 219
Query: 556 VWD 564
VWD
Sbjct: 220 VWD 222
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +1
Query: 253 HIQQPLFVSGGDDYKIKVWNYK--QRRCLFTLLGH---LDYIRTTFFHHEYPWILSASDD 417
+I+ P+FVSG Y+I V + ++++ +D+I +H+ ILSAS D
Sbjct: 279 YIEGPVFVSGTFTYQISVESVLIGHEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMD 338
Query: 418 QTIRIW 435
+T+ IW
Sbjct: 339 KTMMIW 344
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 202 LLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQ 321
L+ EH V I FVS DD +KVW+ ++
Sbjct: 1073 LVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRK 1112
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 415 DQTIRIWNWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVW 561
D +I++ + + + GH V C P + LV+ S D +V +W
Sbjct: 2647 DNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
>At2g39490.1 68415.m04846 F-box family protein ; similar to SKP1
interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 387
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 145 VLASLHNGVIQLWDYRMCTLLEKFDEHDGP--VRGICFHIQQPLFVS 279
++A HNG I+ + + + FDEHD R + H+ + FVS
Sbjct: 48 LVAHSHNGSIEDISHAVSRFINNFDEHDPSKNTRKLELHVDKSTFVS 94
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 502 FHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEH 621
F P D+LV+ S D VR W+ S S+A P H
Sbjct: 33 FSPRADILVATSWDNQVRCWEIS-RSGASLASAPKASISH 71
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 226 DGPVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLF 336
+G VR + F +S G D ++ VW+ + +CL+
Sbjct: 374 NGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLY 410
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 421 TIRIWNWQSRQCISVLTG--HNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGL 576
+I IWN S + T H + FHP + +L + + V +W +G+
Sbjct: 171 SIHIWNVASEHLMPKETTLHHTELITVFAFHPNQRILAAGDVTGRVLIWKDNGI 224
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 232 PVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLF 336
PV I FH F SGG D + +W+ ++ L+
Sbjct: 242 PVNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLY 276
>At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK,
putative similar to cyclin dependent kinase C
[Lycopersicon esculentum] gi|15215944|emb|CAC51391
Length = 505
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 153 SQHPWSLSMKRYAFHPRRLRLEFF*HFDSNTAEIIRK 43
S+ PW + K RR+R EFF HFD + E++ K
Sbjct: 269 SKMPWFNNFKPARPLKRRVR-EFFRHFDRHALELLEK 304
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +1
Query: 268 LFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFH---HEYPW---ILSASDDQTIR 429
+ +SG D I++W+ + + + H+ +R + PW LS DD +
Sbjct: 551 VLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILSPAPTKRPWSKCFLSVGDDSCVA 610
Query: 430 IWNWQSRQCISVLTGHNHY 486
+ + ++ + + GH +Y
Sbjct: 611 LSSLETLRVERMFPGHPNY 629
>At2g28320.1 68415.m03442 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF01852: START domain, PF00169:
PH domain
Length = 737
Score = 28.3 bits (60), Expect = 4.9
Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 7/119 (5%)
Frame = +1
Query: 100 SARVKGISFH--AKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHD-----GPVRGICFHI 258
SARV ++ A PW + NG+ + + L ++D+H G V G I
Sbjct: 159 SARVDPVTTDVVAPSPWTIFGCQNGLRLFKEAKERDSLGRWDDHPAIMAVGVVDGTSETI 218
Query: 259 QQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 435
Q L G + Y Q + L GH D I + PW + D R W
Sbjct: 219 FQTLLSLGPSRSEWDFCFY-QGSVVEHLDGHTDIIHKQLYSDWLPWGMKRRDFSLRRYW 276
>At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile
PF01301: Glycosyl hydrolases family 35
Length = 741
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 513 SGMELSTHYIMVVAGENTYALSRLPIPNSYGLIIRCT*NPWVFMMEECCTYIIQVTKQ 340
+GM + VA E Y + + G + R PW ME TYI+ + KQ
Sbjct: 112 AGMHMILRIGPFVAAEWNYGGVPVWLHYVPGTVFRADNEPWKHYMESFTTYIVNLLKQ 169
>At4g30550.1 68417.m04336 glutamine amidotransferase class-I
domain-containing protein similar to defense-related
protein [Brassica carinata] GI:14009290, component of
aniline dioxygenase (GMP synthase like protein) -
Acinetobacter sp.,PID:d1013698; contains Pfam profile
PF00117: glutamine amidotransferase class-I
Length = 249
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 181 WDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGG 285
W ++C + +K D V GICF Q V GG
Sbjct: 81 WIVKLCEVCQKLDHMKKKVLGICFGHQIITRVKGG 115
>At2g17265.1 68415.m01994 homoserine kinase (HSK) identical to
homoserine kinase [Arabidopsis thaliana]
gi|4927412|gb|AAD33097
Length = 370
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 659 ACPKRSVACGFLKCSVSPAGPGATLFFLSPEKSQTLTDWSNEA 531
A K ++ G C++S AGP A S EK Q + + EA
Sbjct: 299 AVKKAALEAGAFGCTISGAGPTAVAVIDSEEKGQVIGEKMVEA 341
>At4g30540.1 68417.m04335 glutamine amidotransferase class-I
domain-containing protein similar to defense-related
protein [Brassica carinata] GI:14009290; contains Pfam
profile PF00117: glutamine amidotransferase class-I
Length = 248
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 145 VLASLHNGVIQL-WDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGG 285
+ SLH+ + W +C++ +K D + GICF Q V GG
Sbjct: 66 ISGSLHDAFTEEDWIIELCSVCKKLDVMKKKILGICFGHQIICRVRGG 113
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 166 GVIQLWDYRMCTLLEKFDEHDGPVRGICFHIQQPLFVSGGDDYKI 300
G +Q WD TLLE H G V + S G D ++
Sbjct: 269 GTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQV 313
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 91 ETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPV 237
E + V + F+ +LA +G + +WD + ++ + EH PV
Sbjct: 475 ERSQSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHTAPV 523
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 232 PVRGICFHIQQPLFVSGGDDYKIKVWNYKQRRCLF 336
PV I FH F +GG D + +W+ ++ L+
Sbjct: 243 PVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLY 277
>At2g42470.1 68415.m05254 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein contains Pfam
profile PF00917: MATH domain
Length = 898
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 265 PLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIR 366
P+F+SGG ++ I+VW + + + +L+ +R
Sbjct: 50 PIFISGGCEWFIRVWQIEDHLAVTLSVPNLESLR 83
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 424 IRIWNWQS---RQCIS-VLTGHNHYVMCA-QFHPTEDLLVSASLDQSVRVWDFSGLRK 582
I IW+ S R +S +T H+ V+ A FHPTE ++ + + V +W G RK
Sbjct: 189 IHIWDVPSGGSRHAVSRKMTLHHTKVINAFAFHPTERVIAAGDVTGRVLIWRGFGNRK 246
>At1g67570.1 68414.m07698 expressed protein
Length = 456
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 182 GIIVCVHYLRNLMNMMVQYVEFASIFNSLFSCRAEMTTRLRS 307
GII+C+H + + AS ++++ SC + +T++R+
Sbjct: 312 GIILCLHAATKISHRAQAIASVASRWHAMMSCSSTDSTQIRA 353
>At1g09880.1 68414.m01112 hypothetical protein
Length = 631
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 496 AQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPAGLTEHLR 627
++ +P ED++ + +D + W F + +K G G T +R
Sbjct: 474 SELYPDEDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIR 517
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,185,071
Number of Sequences: 28952
Number of extensions: 341092
Number of successful extensions: 2150
Number of sequences better than 10.0: 219
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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