Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m24
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 33 0.19
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 33 0.25
U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical p... 32 0.33
U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical p... 32 0.33
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z80344-1|CAB02485.1| 183|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 31 0.76
U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical p... 31 0.76
U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical p... 31 0.76
Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical pr... 31 1.00
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 30 1.3
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 29 2.3
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 29 3.0
U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related... 29 3.0
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 29 4.0
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 29 4.0
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 29 4.0
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 4.0
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 4.0
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 4.0
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 29 4.0
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 4.0
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 28 7.0
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 28 7.0
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 28 7.0
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 28 7.0
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 7.0
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 28 7.0
AY305834-1|AAR11979.1| 327|Caenorhabditis elegans nuclear recep... 28 7.0
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 7.0
AF083228-1|AAD03686.1| 415|Caenorhabditis elegans nuclear recep... 28 7.0
AC006810-4|AAT68890.1| 425|Caenorhabditis elegans Nuclear hormo... 28 7.0
AC006810-3|AAF59634.2| 414|Caenorhabditis elegans Nuclear hormo... 28 7.0
Z71186-7|CAM35835.1| 552|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z67995-4|CAO78723.1| 233|Caenorhabditis elegans Hypothetical pr... 27 9.3
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTN 407
E+ A DA P++ + E+ K+ + ++ TP +KD + A++I +E P T+
Sbjct: 140 EEAATEDAPVPEV---PEVTERRKKQNK-ENATPLVKKDLKRKAPAVKIEEPEEPEPGTS 195
Query: 408 GESEQKAENGE-SVTTTP 458
++NG+ +++TTP
Sbjct: 196 QNEPSTSQNGKTTLSTTP 213
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 291 QTAKEKELDSGTPEN-EKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTT 455
+ A++++ +G P N +KD EKE IE EKE V ++ +E E TT
Sbjct: 708 RNAEKRKSGAGLPTNSDKDEVIEKEEIEKETEKEKKKVIRRRVKKVSEPSEEEVTT 763
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 309 ELDSGTP--ENEKDATTEKEAIEISNEKEAGPV-TNGESEQKAENGESVTTTPDD 464
E +SGT NE+ TTE + + + KEA + + +S+ + GES TTT D
Sbjct: 194 ESESGTTVSNNEETTTTENKVADEAPSKEAESIQASQDSDHVEKEGESETTTTSD 248
>U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical
protein F42G9.1b protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTN 407
E+ D + K + A + + A++KE + G+P+ + +K I+ S K++ T+
Sbjct: 165 EEQDDTEEKKENEDASAEVVIENAEDKEEEEGSPKKKGQKRCQKSPIQ-SEAKKSKSETD 223
Query: 408 GESEQKAENG-ESVTTTPDD 464
E+ + +G + V T +D
Sbjct: 224 AETAPSSSSGVDGVATEEED 243
>U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical
protein F42G9.1a protein.
Length = 491
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTN 407
E+ D + K + A + + A++KE + G+P+ + +K I+ S K++ T+
Sbjct: 187 EEQDDTEEKKENEDASAEVVIENAEDKEEEEGSPKKKGQKRCQKSPIQ-SEAKKSKSETD 245
Query: 408 GESEQKAENG-ESVTTTPDD 464
E+ + +G + V T +D
Sbjct: 246 AETAPSSSSGVDGVATEEED 265
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 31.9 bits (69), Expect = 0.43
Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 1/127 (0%)
Frame = +3
Query: 300 KEKELDSGTPENEKDATTEKEAIEISNEKEA-GPVTNGESEQKAENGESVTTTPDDGXXX 476
K E +SG E+ TT + + E+ + E E+ E E TTT +
Sbjct: 152 KTTEEESGNVSAEEVTTTSSTEVSVEEEQTVKSTEASTEEEKSTEASEEATTTSSETSET 211
Query: 477 XXXXXXXXWSLRSISFSRKDKPXXXXXXXXXXXXXNGEPEKVPEEVIEATAEQSQNETVE 656
+ + + K +K EE + T E S E+ E
Sbjct: 212 TEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVTTTPEPSTEESSE 271
Query: 657 EVKTPSE 677
+T E
Sbjct: 272 SPETSEE 278
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Frame = +3
Query: 288 EQTAKEKELDSGTPENEKDATTEKEAIEISNEK------EAGPVTNGESEQKAENGESVT 449
E T E T E+E++ TT K A + K EA + + K E VT
Sbjct: 200 EATTTSSETSETTEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVT 259
Query: 450 TTPD 461
TTP+
Sbjct: 260 TTPE 263
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +3
Query: 297 AKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTT 455
A + ++ TP +E++ TTE+E+ +S E+ T +E E ++V +T
Sbjct: 136 APAESAETETPSSEENKTTEEESGNVSAEE---VTTTSSTEVSVEEEQTVKST 185
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.57
Identities = 36/145 (24%), Positives = 56/145 (38%)
Frame = +3
Query: 243 VDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQ 422
+D ++PQ++GD E AK+ +LDS + + KE E+ E+E N S
Sbjct: 40 LDQMEPQVSGDDESLEM-AKKVKLDSAQTSSFSSQSKMKEP-EVP-EREPSTPNNSRSNW 96
Query: 423 KAENGESVTTTPDDGXXXXXXXXXXXWSLRSISFSRKDKPXXXXXXXXXXXXXNGEPEKV 602
+++ E +T D + +S GE E+
Sbjct: 97 RSDMDEELTDDEDTPTP----------EVIDVSSDESMADVMEEINQEVEEEEEGEAEEG 146
Query: 603 PEEVIEATAEQSQNETVEEVKTPSE 677
EEV+E E E VEE+K E
Sbjct: 147 QEEVVEEVEE--DEEEVEEIKEKVE 169
>Z80344-1|CAB02485.1| 183|Caenorhabditis elegans Hypothetical
protein F15D4.2 protein.
Length = 183
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 294 TAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDDG 467
+A E E E +A E++A+E + EA + E + + G + +T PD G
Sbjct: 95 SAGESEKSESPEIPEPEAKMEEQAVEAAEASEASDDGREDGEIRDDQGNTTSTPPDPG 152
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +3
Query: 303 EKELDSGTPENEKDATTEKEAIE----ISNEKEAGPVTNGESEQKAEN-GESVTTTPDD 464
+ ++DSG PE+ +D +K+ E +++ + + + EN GE V+TTP++
Sbjct: 169 QPDMDSGEPESAEDGIDKKKTAEKVDFTTDDNNVSQEADAKPDSTHENGGEHVSTTPEE 227
>U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical
protein C10G8.8b protein.
Length = 295
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTN 407
E+L + + +++ + H E+ +++ ++ TP+N + A E+ E S +KE T
Sbjct: 202 EELEEEPKSEDEVDVEDHDQEE-CQDQRTETQTPKNSEPAQEEETRAEESKDKEN---TE 257
Query: 408 GESEQKAENGESV 446
E K E+ E V
Sbjct: 258 NSDETKEESSEDV 270
>U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical
protein C10G8.8a protein.
Length = 385
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTN 407
E+L + + +++ + H E+ +++ ++ TP+N + A E+ E S +KE T
Sbjct: 292 EELEEEPKSEDEVDVEDHDQEE-CQDQRTETQTPKNSEPAQEEETRAEESKDKEN---TE 347
Query: 408 GESEQKAENGESV 446
E K E+ E V
Sbjct: 348 NSDETKEESSEDV 360
>Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical
protein C17E4.6 protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.00
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 267 NGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGES 443
+ D H +E + + + G+ NE++ T K + NE+ +N EQ+ EN ++
Sbjct: 22 SNDEHSNESSTRSSKSRDGSHHNEEEGETSKASDPQINEESEDETSNASDEQE-ENDDT 79
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +3
Query: 288 EQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDD 464
++ KEKE + +NE D EKEA E EKE P E++ E T T D+
Sbjct: 72 KEKEKEKEKEKTHEKNEADKE-EKEA-EKEEEKEEKPPKEVTEEKEKEKEREKTKTKDE 128
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 279 HIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESE 419
H HE +E E DS PE E+ + E+E + E G + ES+
Sbjct: 331 HDHEDEPEEPENDSNVPEAEEKSDEEQEIMMEDVEGLEGGENDSESD 377
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 279 HIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESE 419
H HE +E E DS PE E+ + E+E + E G + ES+
Sbjct: 331 HDHEDEPEEPENDSNVPEAEEKSDEEQEIMMEDVEGLEGGENDSESD 377
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 303 EKELDSGTPENEKDATTEKEAIEISN---EKEAGPVTNGESEQKAENGES 443
E D TP++ ++ T EKE++++ + E E N SE+ + E+
Sbjct: 582 EPTTDDSTPQSTEEKTEEKESVKVEDSTPEPEPETPVNSTSEESPKTNET 631
>U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related
family protein 6 protein.
Length = 982
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 231 QLADVDALKPQIN-GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTN 407
Q++ ++ P I GD + E + + L ++ KDA EKE + EA N
Sbjct: 478 QMSGRNSCMPCITAGDIYTIEDGSLQPNLKKKKSKSRKDAKAEKE-----KKDEAKNDKN 532
Query: 408 GESEQKAENGE--SVTTTPD 461
E E+ AEN E S ++PD
Sbjct: 533 MEIEENAENAEKSSYDSSPD 552
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 315 DSGTPENEKDATTEKEAIEISNEKEAGPVTNGES-EQKAENGE 440
DS T E +K T++ +E +EK+ P GE+ E K ENG+
Sbjct: 509 DSSTCEQKK---TDESGLEEDSEKDQKPSDAGETDEMKEENGD 548
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 288 EQTAKEKELDSGTPENEKDATTEKEAIEIS--NEKEAGPVTNGESEQKAENGESVTTTPD 461
+ T ++ TP ++K+ T A +++ +++A T+G+++ N E T D
Sbjct: 1809 DMTPRDSAGTPSTPRDDKNQTLSVSAPDLAAARQRQASAETDGDADADETNSEDKTVGAD 1868
Query: 462 D 464
D
Sbjct: 1869 D 1869
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 315 DSGTPENEKDATTEKEAIEISNEKEAGPVTNGES-EQKAENGE 440
DS T E +K T++ +E +EK+ P GE+ E K ENG+
Sbjct: 509 DSSTCEQKK---TDESGLEEDSEKDQKPSDAGETDEMKEENGD 548
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 228 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEK-EAGPVT 404
E L +D P N + +++ PE E +E+ E S EK + P
Sbjct: 958 EFLMKIDTPAPDPNAMVVEKILNMRMGKVEKKVPETEVAEGSEENGEEKSEEKVKKEPKE 1017
Query: 405 NGESEQKAENGES 443
NGE+ + NGES
Sbjct: 1018 NGENGESVGNGES 1030
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 273 DAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAG--PVTNGESEQKAENGESV 446
+A + E +E PE E+ A E+ IE++ E+ PV E+E +AE E
Sbjct: 200 EAAVEEPVVEEAAPVEEAPEAEETAPAEEPLIEVAVEEAPAEEPVAE-EAEPEAEKQEFE 258
Query: 447 TTTPDDG 467
P +G
Sbjct: 259 LQAPPEG 265
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 273 DAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAG--PVTNGESEQKAENGESV 446
+A + E +E PE E+ A E+ IE++ E+ PV E+E +AE E
Sbjct: 150 EAAVEEPVVEEAAPVEEAPEAEETAPAEEPLIEVAVEEAPAEEPVAE-EAEPEAEKQEFE 208
Query: 447 TTTPDDG 467
P +G
Sbjct: 209 LQAPPEG 215
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 273 DAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAG--PVTNGESEQKAENGESV 446
+A + E +E PE E+ A E+ IE++ E+ PV E+E +AE E
Sbjct: 200 EAAVEEPVVEEAAPVEEAPEAEETAPAEEPLIEVAVEEAPAEEPVAE-EAEPEAEKQEFE 258
Query: 447 TTTPDDG 467
P +G
Sbjct: 259 LQAPPEG 265
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 273 DAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAG--PVTNGESEQKAENGESV 446
+A + E +E PE E+ A E+ IE++ E+ PV E+E +AE E
Sbjct: 200 EAAVEEPVVEEAAPVEEAPEAEETAPAEEPLIEVAVEEAPAEEPVAE-EAEPEAEKQEFE 258
Query: 447 TTTPDDG 467
P +G
Sbjct: 259 LQAPPEG 265
>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical
protein F33H1.4 protein.
Length = 1385
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 246 DALKPQINGDAHIHE--QTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGP 398
D ++P I DAHI E EK++ E ++D E+E +++ AGP
Sbjct: 203 DNIEPLIPNDAHIEEVRHEVVEKDVVKSVIERDRDEDQEQEHASVAD--PAGP 253
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 270 GDAHIHEQTAKEKELDSGTPENEKDAT--TEKEAIEISNEKEAGPVTNGESEQKAENGES 443
GD+ + E++ D +NE T T K + + + K G T+ +E + G
Sbjct: 17 GDSSSDVDSGPERDRDEDDSDNESRNTSKTSKSSKKSKSGKSTG--TSEMTELSDDGGSD 74
Query: 444 VTTTPDDG 467
+ PDDG
Sbjct: 75 IELLPDDG 82
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 288 EQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGE 440
++ A+E++ + E K+A EK N+K+ G+S+ K ++GE
Sbjct: 2210 KKRAEEEKEAAEKKEESKNAEDEKNKNNAENKKDTKEGEKGKSKDKEKDGE 2260
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +3
Query: 279 HIHEQTAKEKELDS----GTPENEKDATTEKEAIEISNEKEAGPVT 404
+I ++ KE++ DS GT + KD + E +EI + E P T
Sbjct: 30 NIEKKNGKEQDADSTKSNGTSSSNKDGKEKFEQVEIEEKTEIDPKT 75
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 270 GDAHIHEQTAKEKELDSGTPENEKDAT--TEKEAIEISNEKEAGPVTNGESEQKAENGES 443
GD+ + E++ D +NE T T K + + + K G T+ +E + G
Sbjct: 17 GDSSSDVDSGPERDRDEDDSDNESRNTSKTSKSSKKSKSGKSTG--TSEMTELSDDGGSD 74
Query: 444 VTTTPDDG 467
+ PDDG
Sbjct: 75 IELLPDDG 82
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 246 DALKPQINGDAH-IHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQ 422
+ L NG A T K KE P ++DAT E N + P T+ ESEQ
Sbjct: 1410 EVLAKAANGSAQGSSRSTPKPKEEPKEEPMEKEDAT------ETVNGATSEPATDAESEQ 1463
Query: 423 KAENGESVTT 452
A E + T
Sbjct: 1464 NAPVDEPMDT 1473
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +3
Query: 243 VDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQ 422
VD LK +++ K+ E + G + ++ + +KE + ++ + E+
Sbjct: 1271 VDRLKRSDEPSKKDEKESPKDTESEKGEGKKRRERSKDKETGKEKRLEKDNKEREKDKER 1330
Query: 423 KAENGES 443
K ENGE+
Sbjct: 1331 KRENGEN 1337
>AY305834-1|AAR11979.1| 327|Caenorhabditis elegans nuclear receptor
NHR-13 protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +3
Query: 282 IHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 449
I +++ + + E + D ++ E+ NE GP + AEN E+VT
Sbjct: 11 IRKRSVLGDNVKENSEEIQNDDDPQESDAEMENESTPGPSSEPSENVSAENQETVT 66
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 246 DALKPQINGDAH-IHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQ 422
+ L NG A T K KE P ++DAT E N + P T+ ESEQ
Sbjct: 1410 EVLAKAANGSAQGSSRSTPKPKEEPKEEPMEKEDAT------ETVNGATSEPATDAESEQ 1463
Query: 423 KAENGESVTT 452
A E + T
Sbjct: 1464 NAPVDEPMDT 1473
>AF083228-1|AAD03686.1| 415|Caenorhabditis elegans nuclear receptor
NHR-13 protein.
Length = 415
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +3
Query: 282 IHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 449
I +++ + + E + D ++ E+ NE GP + AEN E+VT
Sbjct: 99 IRKRSVLGDNVKENSEEIQNDDDPQESDAEMENESTPGPSSEPSENVSAENQETVT 154
>AC006810-4|AAT68890.1| 425|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 13, isoform b protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +3
Query: 282 IHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 449
I +++ + + E + D ++ E+ NE GP + AEN E+VT
Sbjct: 98 IRKRSVLGDNVKENSEEIQNDDDPQESDAEMENESTPGPSSEPSENVSAENQETVT 153
>AC006810-3|AAF59634.2| 414|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 13, isoform a protein.
Length = 414
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +3
Query: 282 IHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 449
I +++ + + E + D ++ E+ NE GP + AEN E+VT
Sbjct: 98 IRKRSVLGDNVKENSEEIQNDDDPQESDAEMENESTPGPSSEPSENVSAENQETVT 153
>Z71186-7|CAM35835.1| 552|Caenorhabditis elegans Hypothetical
protein F23D12.10 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 594 EKVPEEVIEATAEQSQNETVEEVKTP 671
E PEEVI +T +N+ +++VK P
Sbjct: 358 EITPEEVIGSTQNLHENKAIKDVKVP 383
>Z67995-4|CAO78723.1| 233|Caenorhabditis elegans Hypothetical
protein M153.5 protein.
Length = 233
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 227 DATFTTSAGCGHLSSAFR 174
DA+F+T GCG SAFR
Sbjct: 133 DASFSTIGGCGAFPSAFR 150
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 288 EQTAKEKELDSGTPENE--KDATTEKEAIEISNEKEAGPVTNGESEQKAENGE 440
++ +KE+E + NE K+ +++EA++ EK+ G + E +ENGE
Sbjct: 407 DEISKEEEEKAEKELNEIIKELKSDEEAVD--GEKDVGELKTREVNMTSENGE 457
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,526,746
Number of Sequences: 27780
Number of extensions: 201862
Number of successful extensions: 1015
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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