Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m23
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88167-7|AAB42229.1|  378|Caenorhabditis elegans Hypothetical pr...    58   7e-09
AC024877-13|AAF60901.2|  710|Caenorhabditis elegans Nematode ast...    34   0.10 
Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z82076-6|CAH10809.1|  450|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z35637-5|CAE17723.1|  185|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical ...    29   2.9  
U39999-12|AAA81110.1|  577|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z83220-3|CAB05702.1|  493|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z78062-2|CAB01499.2|  689|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AF039052-5|AAF98626.2|  586|Caenorhabditis elegans Hypothetical ...    27   8.8  

>U88167-7|AAB42229.1|  378|Caenorhabditis elegans Hypothetical
           protein D2092.2 protein.
          Length = 378

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 25/57 (43%), Positives = 38/57 (66%)
 Frame = +1

Query: 280 FNYDTMKNSLIERLESFTSAPFTVQRICELLTYPRKQYNRVDKFMRAIEKNILVVST 450
           F+ +     ++ + +SF   PFT QR+CELL  P + YN +DKF+RA++K I VV+T
Sbjct: 155 FSTEESMEFVLSKAKSFDGFPFTWQRLCELLIEPMRHYNTIDKFLRAVDKVINVVTT 211


>AC024877-13|AAF60901.2|  710|Caenorhabditis elegans Nematode
           astacin protease protein30 protein.
          Length = 710

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 22/80 (27%), Positives = 36/80 (45%)
 Frame = +1

Query: 109 IPQELNEYLAYVARTGDPVYQWPLVKSLFKEKLLNVITDFYDTTPNTDIPPYPNVDPFNY 288
           IP + ++ L  +     PVY+ P  K+   E+  N+   F       +  P P+ D  N+
Sbjct: 9   IPAKSDKILETIFSDAPPVYRQPRTKAEKIERFRNIARTFSPFVYEVNTTPAPHFD--NF 66

Query: 289 DTMKNSLIERLESFTSAPFT 348
              +N+     E FT APF+
Sbjct: 67  IWQQNAPAVTPEPFTFAPFS 86


>Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical
           protein W07G1.5a protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +1

Query: 469 RQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQ 609
           RQP PE+ +  E   NG +++ E  V+ + ED    EA E+ + E +
Sbjct: 339 RQPTPESSEEEEDEGNGDEDDDE-EVEDDEEDAGSDEAEEEPSDEEE 384


>Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical
           protein F22B5.2 protein.
          Length = 256

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 457 PGIVRQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATE 588
           P +V   E    DNA H+  G+D         E++ V WK  T+
Sbjct: 5   PEVVSWAEAVEQDNAPHIQEGADGTRTETAFTEVDGVRWKVVTQ 48


>Z82076-6|CAH10809.1|  450|Caenorhabditis elegans Hypothetical
           protein W07G1.5b protein.
          Length = 450

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +1

Query: 463 IVRQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQ 609
           + +QP PE+ +  E   NG +++ E  V+ + ED    EA E+ + E +
Sbjct: 349 VSQQPTPESSEEEEDEGNGDEDDDE-EVEDDEEDAGSDEAEEEPSDEEE 396


>Z35637-5|CAE17723.1|  185|Caenorhabditis elegans Hypothetical
           protein C03C10.7 protein.
          Length = 185

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 406 KFMRAIEKNILVVSTREPGIVRQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEAT 585
           +F   + ++ L    R+P  ++ P+P+     E L+  ++   E   +V+      ++A 
Sbjct: 6   RFSVTLSEDDLRPHLRKPKPLKPPKPQQSSEIEELIRRNEKREEAKKEVKRRIEEEEKAK 65

Query: 586 EQRNSEPQ 609
           EQR  + +
Sbjct: 66  EQRKRDEE 73


>AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5a protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 541 NVDVEMEDVSWKEATEQRNSEPQPCSSDAHISV 639
           +V+VE+E+      TEQ ++ P+ CS + H+ +
Sbjct: 539 SVNVELENRDSNVKTEQLSTSPETCSEEKHLYI 571


>AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5b protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 541 NVDVEMEDVSWKEATEQRNSEPQPCSSDAHISV 639
           +V+VE+E+      TEQ ++ P+ CS + H+ +
Sbjct: 541 SVNVELENRDSNVKTEQLSTSPETCSEEKHLYI 573


>U39999-12|AAA81110.1|  577|Caenorhabditis elegans Hypothetical
           protein F41G3.3 protein.
          Length = 577

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 223 DFYDTTPNTDIPPYPNVDP 279
           DFYDT P T++PP   + P
Sbjct: 115 DFYDTVPATNVPPVKPMGP 133


>Z83220-3|CAB05702.1|  493|Caenorhabditis elegans Hypothetical
           protein C34B7.3 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 259 PYPNVDPFNYDTMKNSLIERLESFTSAPFT 348
           P+P +   +YD +K ++++  ESF+  P T
Sbjct: 68  PFPTIVICDYDMLKRNIVKNGESFSGRPDT 97


>Z78062-2|CAB01499.2|  689|Caenorhabditis elegans Hypothetical
           protein F16D3.2 protein.
          Length = 689

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 469 RQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEP-QPCSSDAHIS 636
           R P P  G+N   +    D+   YN D +    S + ++ +RN +P +P S  ++IS
Sbjct: 210 RDPSPRRGNNYGDIRGRPDSRDGYNGDRD----STRYSSPRRNEQPGRPSSRGSNIS 262


>AF039052-5|AAF98626.2|  586|Caenorhabditis elegans Hypothetical
           protein T22D1.4 protein.
          Length = 586

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +1

Query: 334 SAPFTVQRICELLTYPRKQYNRVDKFMRAIEKN 432
           S     ++  ELL Y +  ++ VD +++A+EK+
Sbjct: 524 SGASAAEKASELLKYDKTVFDAVDNYLKAVEKS 556


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.313    0.132    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,589,683
Number of Sequences: 27780
Number of extensions: 338598
Number of successful extensions: 814
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)