Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l15
(640 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g28520.1 68415.m03465 vacuolar proton ATPase, putative simila... 31 0.49
At3g47340.3 68416.m05147 asparagine synthetase 1 [glutamine-hydr... 31 0.85
At3g47340.2 68416.m05146 asparagine synthetase 1 [glutamine-hydr... 31 0.85
At3g47340.1 68416.m05145 asparagine synthetase 1 [glutamine-hydr... 31 0.85
At5g47690.1 68418.m05887 expressed protein 28 4.5
At4g13620.1 68417.m02120 AP2 domain-containing transcription fac... 28 4.5
At3g28080.2 68416.m03506 nodulin MtN21 family protein similar to... 28 4.5
At3g28080.1 68416.m03505 nodulin MtN21 family protein similar to... 28 4.5
At5g65010.2 68418.m08178 asparagine synthetase 2 (ASN2) identica... 27 7.9
At5g65010.1 68418.m08177 asparagine synthetase 2 (ASN2) identica... 27 7.9
At5g10240.1 68418.m01189 asparagine synthetase 3 (ASN3) identica... 27 7.9
At4g39700.1 68417.m05618 heavy-metal-associated domain-containin... 27 7.9
>At2g28520.1 68415.m03465 vacuolar proton ATPase, putative similar
to Swiss-Prot:Q93050 vacuolar proton translocating
ATPase 116 kDa subunit A isoform 1 (Clathrin-coated
vesicle/synaptic vesicle proton pump 116 kDa subunit,
Vacuolar proton pump subunit 1, Vacuolar adenosine
triphosphatase subunit Ac116) [Homo sapiens]
Length = 817
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 297 ESWDSRTSDTQI--IMEKLSYDCDSQIDKVINVLKSLKGPFSLIYYCKVTNKLYFTRDRF 470
E W + TQI ++++ ++D SQ+ + +V+++++ P + K+TN D +
Sbjct: 344 EGWCPTFAKTQIHEVLQRATFDSSSQVGVIFHVMQAVESPPTYFRTNKLTNAFQEIIDAY 403
Query: 471 G 473
G
Sbjct: 404 G 404
>At3g47340.3 68416.m05147 asparagine synthetase 1
[glutamine-hydrolyzing] / glutamine-dependent asparagine
synthetase 1 (ASN1) identical to SP|P49078 Asparagine
synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
(Glutamine- dependent asparagine synthetase)
{Arabidopsis thaliana}
Length = 456
Score = 30.7 bits (66), Expect = 0.85
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Frame = +3
Query: 57 MCGIFLELSCEKCSIVNDIDVL---RRLKNRGPDHLQRKDFISEIGHHIVFVASVLWMQG 227
MCGI L C S + VL RRL++RGPD + + G + + L +
Sbjct: 1 MCGILAVLGCSDDSQAKRVRVLELSRRLRHRGPDW----SGLYQNGDNYL-AHQRLAVID 55
Query: 228 PQMTLQPLENE--CGILLYNGDIFD-ESWDSRTSDTQIIMEKLSYDCD----SQIDKVIN 386
P QPL NE ++ NG+I++ E R + + + DC+ + ++
Sbjct: 56 PASGDQPLFNEDKTIVVTVNGEIYNHEELRKRLKNHKF---RTGSDCEVIAHLYEEYGVD 112
Query: 387 VLKSLKGPFSLIYYCKVTNKLYFTRDRFGRNSLLI 491
+ L G FS + N RD G SL I
Sbjct: 113 FVDMLDGIFSFVLLDTRDNSFMVARDAIGVTSLYI 147
>At3g47340.2 68416.m05146 asparagine synthetase 1
[glutamine-hydrolyzing] / glutamine-dependent asparagine
synthetase 1 (ASN1) identical to SP|P49078 Asparagine
synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
(Glutamine- dependent asparagine synthetase)
{Arabidopsis thaliana}
Length = 512
Score = 30.7 bits (66), Expect = 0.85
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Frame = +3
Query: 57 MCGIFLELSCEKCSIVNDIDVL---RRLKNRGPDHLQRKDFISEIGHHIVFVASVLWMQG 227
MCGI L C S + VL RRL++RGPD + + G + + L +
Sbjct: 1 MCGILAVLGCSDDSQAKRVRVLELSRRLRHRGPDW----SGLYQNGDNYL-AHQRLAVID 55
Query: 228 PQMTLQPLENE--CGILLYNGDIFD-ESWDSRTSDTQIIMEKLSYDCD----SQIDKVIN 386
P QPL NE ++ NG+I++ E R + + + DC+ + ++
Sbjct: 56 PASGDQPLFNEDKTIVVTVNGEIYNHEELRKRLKNHKF---RTGSDCEVIAHLYEEYGVD 112
Query: 387 VLKSLKGPFSLIYYCKVTNKLYFTRDRFGRNSLLI 491
+ L G FS + N RD G SL I
Sbjct: 113 FVDMLDGIFSFVLLDTRDNSFMVARDAIGVTSLYI 147
>At3g47340.1 68416.m05145 asparagine synthetase 1
[glutamine-hydrolyzing] / glutamine-dependent asparagine
synthetase 1 (ASN1) identical to SP|P49078 Asparagine
synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
(Glutamine- dependent asparagine synthetase)
{Arabidopsis thaliana}
Length = 584
Score = 30.7 bits (66), Expect = 0.85
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Frame = +3
Query: 57 MCGIFLELSCEKCSIVNDIDVL---RRLKNRGPDHLQRKDFISEIGHHIVFVASVLWMQG 227
MCGI L C S + VL RRL++RGPD + + G + + L +
Sbjct: 1 MCGILAVLGCSDDSQAKRVRVLELSRRLRHRGPDW----SGLYQNGDNYL-AHQRLAVID 55
Query: 228 PQMTLQPLENE--CGILLYNGDIFD-ESWDSRTSDTQIIMEKLSYDCD----SQIDKVIN 386
P QPL NE ++ NG+I++ E R + + + DC+ + ++
Sbjct: 56 PASGDQPLFNEDKTIVVTVNGEIYNHEELRKRLKNHKF---RTGSDCEVIAHLYEEYGVD 112
Query: 387 VLKSLKGPFSLIYYCKVTNKLYFTRDRFGRNSLLI 491
+ L G FS + N RD G SL I
Sbjct: 113 FVDMLDGIFSFVLLDTRDNSFMVARDAIGVTSLYI 147
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 105 NDIDVLRRLKNRGPDHLQRKD-FISEIGH 188
ND+DVL+ ++ DHLQ D F S GH
Sbjct: 1180 NDVDVLKMVREINLDHLQMLDKFESSNGH 1208
>At4g13620.1 68417.m02120 AP2 domain-containing transcription
factor, putative similar to AP2 domain containing
protein RAP2.4 [Arabidopsis thaliana] GI:2281633;
contains Pfam profile PF00847: AP2 domain
Length = 388
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1
Query: 319 LVLLSQDSSNISPLYKRMPHSF 254
L+ LSQ SN+SP +K +P+SF
Sbjct: 156 LLELSQSESNMSPYHKYIPNSF 177
>At3g28080.2 68416.m03506 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 350
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 336 MEKLSYDCDSQIDKVINVLKSLKGPFSLIYY 428
MEK+S+ S + KV+ + SL G F +I+Y
Sbjct: 119 MEKVSFKERSSVAKVMGTILSLIGAFVVIFY 149
>At3g28080.1 68416.m03505 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 358
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 336 MEKLSYDCDSQIDKVINVLKSLKGPFSLIYY 428
MEK+S+ S + KV+ + SL G F +I+Y
Sbjct: 127 MEKVSFKERSSVAKVMGTILSLIGAFVVIFY 157
>At5g65010.2 68418.m08178 asparagine synthetase 2 (ASN2) identical
to asparagine synthetase (ASN2) [Arabidopsis thaliana]
GI:3859536
Length = 579
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 57 MCGIFLELSC---EKCSIVNDIDVLRRLKNRGPD 149
MCGI L C + I++ RRL++RGPD
Sbjct: 1 MCGILAVLGCIDNSQAKRSRIIELSRRLRHRGPD 34
>At5g65010.1 68418.m08177 asparagine synthetase 2 (ASN2) identical
to asparagine synthetase (ASN2) [Arabidopsis thaliana]
GI:3859536
Length = 578
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 57 MCGIFLELSC---EKCSIVNDIDVLRRLKNRGPD 149
MCGI L C + I++ RRL++RGPD
Sbjct: 1 MCGILAVLGCIDNSQAKRSRIIELSRRLRHRGPD 34
>At5g10240.1 68418.m01189 asparagine synthetase 3 (ASN3) identical
to asparagine synthetase (ASN3) [Arabidopsis thaliana]
GI:3859534
Length = 578
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 57 MCGIFLELSCEKCSIVND---IDVLRRLKNRGPD 149
MCGI L C S I++ RRL++RGPD
Sbjct: 1 MCGILAVLGCVDNSQAKRSRIIELSRRLRHRGPD 34
>At4g39700.1 68417.m05618 heavy-metal-associated domain-containing
protein / copper chaperone (CCH)-related low similarity
to copper homeostasis factor [GI:3168840][PMID:9701579];
similar to farnesylated proteins GMFP7 [Glycine
max][GI:4097573] and ATFP7 [GI:4097555]; contains
heavy-metal-associated domain PF00403
Length = 158
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 270 LLYNGDIFDESWDSRTSDTQIIMEKLSYDCDSQIDKVINVLKSLKG 407
L+ NG + Q + K+ DCD + K+ N L SLKG
Sbjct: 13 LIGNGGSHSYGKRKKKKQFQTVELKVRMDCDGCVLKIKNSLSSLKG 58
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,414,418
Number of Sequences: 28952
Number of extensions: 263916
Number of successful extensions: 675
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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