Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11k21
(614 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 183 2e-47
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 70 2e-13
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 68 9e-13
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 66 4e-12
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 63 3e-11
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 63 3e-11
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 62 8e-11
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 62 8e-11
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 60 2e-10
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 60 2e-10
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 53 3e-08
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 52 7e-08
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 52 9e-08
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 51 2e-07
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 49 6e-07
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 47 2e-06
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 46 3e-06
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 38 0.002
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 36 0.006
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 34 0.019
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.043
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 31 0.13
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.53
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 28 1.2
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 28 1.2
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 26 3.8
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 26 3.8
SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein L9|Schizosaccha... 26 5.0
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 6.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 6.6
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 25 6.6
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 25 8.7
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 8.7
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 25 8.7
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 25 8.7
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 25 8.7
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 183 bits (445), Expect = 2e-47
Identities = 90/137 (65%), Positives = 105/137 (76%), Gaps = 1/137 (0%)
Frame = +2
Query: 128 DMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDT 307
++PTFK VLVGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL FHTN G I FNVWDT
Sbjct: 6 NVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDT 65
Query: 308 AGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYK-MYLTGIEIWSVYVKVSLLSCAGTKWI 484
AGQEK GGLRDGYYIQGQC IIMFDVTSR+TYK + ++ V + ++ C G K
Sbjct: 66 AGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLC-GNKVD 124
Query: 485 LKTEKLRRKLLFSTEKR 535
+K K++ K + K+
Sbjct: 125 VKERKVKAKAITFHRKK 141
Score = 141 bits (341), Expect = 8e-35
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = +1
Query: 403 QNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFE 582
+NVP+W RDLVRVCE IPIVLCGNKVD+K+RKVKAK I FHRKKNLQYYDISAKSNYNFE
Sbjct: 98 KNVPHWWRDLVRVCENIPIVLCGNKVDVKERKVKAKAITFHRKKNLQYYDISAKSNYNFE 157
Query: 583 KPFLWLARKL 612
KPFLWLARKL
Sbjct: 158 KPFLWLARKL 167
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 70.1 bits (164), Expect = 2e-13
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
FK +L+GD G GK+ + R + + Y++T+GV+ F ++ +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTY---KMYLTGIEIWSV 439
+F + YY II++DVT + ++ K +L I+ ++V
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAV 111
Score = 44.0 bits (99), Expect = 2e-05
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +1
Query: 406 NVPNWHRDLVRVC-EGIPIVLCGNKVDIKDRKVKAKTIV--FHRKKNLQYYDISAKSNYN 576
NV W +++ R EG+ +L GNK D+ D+KV ++ F N+ + + SAK + N
Sbjct: 98 NVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTN 157
Query: 577 FEKPFLWLARKL 612
E+ FL ++R++
Sbjct: 158 VEQAFLTMSRQI 169
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 68.1 bits (159), Expect = 9e-13
Identities = 29/88 (32%), Positives = 49/88 (55%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
FK V +G+ GKT+ + R + +F+ Y AT+G++ + +R +WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
+F L Y AII++D+T+ ++
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSF 99
Score = 31.9 bits (69), Expect = 0.076
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +1
Query: 385 NLSSYVQNVPNWHRDLVRVCEG--IPIVLCGNKVDIKDRKVKAKTIVFHRKKNLQ--YYD 552
N +S+V N W D VR G + IVL GNK D+ D++ + + K L+ + +
Sbjct: 95 NHNSFV-NTEKWIED-VRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHME 152
Query: 553 ISAKSNYNFEKPFLWLARKL 612
SAK+ +N + F +A+ L
Sbjct: 153 TSAKAGHNVKLLFRKIAQML 172
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 66.1 bits (154), Expect = 4e-12
Identities = 30/88 (34%), Positives = 49/88 (55%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
FK VL+GD G GK+ + R EF + +T+GVE + I+ +WDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
++ + YY A+I++D+T + ++
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSF 98
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 63.3 bits (147), Expect = 3e-11
Identities = 33/92 (35%), Positives = 49/92 (53%)
Frame = +2
Query: 131 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 310
MPT KCV+VGDG GKT + + T +F YV T+ + + + P ++DTA
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTA 59
Query: 311 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
GQE + LR Y Q ++ F VTS +++
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVTSPASFE 91
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 63.3 bits (147), Expect = 3e-11
Identities = 25/88 (28%), Positives = 50/88 (56%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
K +++G+ G GKT+ + +++ +F K Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
F L +Y C ++++DV + +++
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFE 97
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +1
Query: 445 EGIPIVLCGNKVDIKDRK---VKAKTIVF-HRKKNLQYYDISAKSNYNFEKPFLWLAR 606
E P +L GNKVD++++K K+K + F + + Y++ SAK N ++ F +A+
Sbjct: 116 ETFPFILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 61.7 bits (143), Expect = 8e-11
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGPIRFNVWDTAGQ 316
K VL+GD GK++ V R + +F+ +T+G L N ++ +WDTAGQ
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS-VKLEIWDTAGQ 74
Query: 317 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGI-EIWSVYVKVSLLSCAGTKWILKT 493
E++ L YY CAI+++D+T + + + I E+ + +++ AG K L
Sbjct: 75 ERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 494 EK 499
E+
Sbjct: 135 ER 136
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 61.7 bits (143), Expect = 8e-11
Identities = 25/87 (28%), Positives = 46/87 (52%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
K +L+GD G GK+ + R F ++ T+G++ + I+ +WDTAGQE+
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSRVTY 403
F + YY ++++DVT + ++
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSF 97
Score = 32.7 bits (71), Expect = 0.043
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 406 NVPNWHRDLVR-VCEGIPIVLCGNKVDIKDRKVKA--KTIVFHRKKNLQYYDISAKSNYN 576
NV W ++ + E + +L GNK D +D++ + + + +++ + SAK+N N
Sbjct: 99 NVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVN 158
Query: 577 FEKPFLWLARKL 612
++ F LAR++
Sbjct: 159 VDEAFFTLAREI 170
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 60.5 bits (140), Expect = 2e-10
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP----IRFNVWDTA 310
K VL G GTGK+ ++R + +++ + T+G++ + G I+ +WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 311 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
GQEKF + YY A++++DVT++ +++
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFE 102
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 60.5 bits (140), Expect = 2e-10
Identities = 26/87 (29%), Positives = 48/87 (55%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
K V++GD G GKT + + + +F ++Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSRVTY 403
F L +Y C +I+++V + ++
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSF 96
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 53.2 bits (122), Expect = 3e-08
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 319
K V+VGDGG GKT + +G F ++YV T+ + + + N I +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 320 KFGGLRDGYYIQGQCAIIMFDV 385
++ LR Y ++ F +
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSI 97
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 418 WHRDLVRVCEGIPIVLCGNKVDI-KDR 495
W+ ++ C PIVL G K D+ KDR
Sbjct: 110 WYPEVQHFCPRTPIVLVGLKADLRKDR 136
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 52.0 bits (119), Expect = 7e-08
Identities = 26/88 (29%), Positives = 48/88 (54%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
+K V+VGDGG GK+ + + F +Y T+ G + +V DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQE 67
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
++ +R+ Y G+ ++++++TSR ++
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSF 95
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 51.6 bits (118), Expect = 9e-08
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 319
K V++GDG GKT+ + G F + Y T+ +H + N I ++WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNS--IELSLWDTAGQE 72
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLT 418
++ LR Y +I F V SR + + +T
Sbjct: 73 EYDQLRSLSYSDTHVIMICFAVDSRDSLENVIT 105
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +2
Query: 137 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQ 316
T K ++GD GKT+ + ++ G F+++ TLGV I F++WD GQ
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 317 EKFGGLRDGYYIQGQCAIIMFDVTSRVT 400
+F + + MFD++ + T
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKST 97
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 48.8 bits (111), Expect = 6e-07
Identities = 27/83 (32%), Positives = 43/83 (51%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
K V+VGDG GKT+ + G F +YV T+ E + + ++ +WDTAGQE+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV-FENYVSDCRVDGKSVQLALWDTAGQEE 68
Query: 323 FGGLRDGYYIQGQCAIIMFDVTS 391
+ LR Y + ++ F + S
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDS 91
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 46.8 bits (106), Expect = 2e-06
Identities = 29/81 (35%), Positives = 38/81 (46%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
K V+VGDG GKT + G F + YV T+ E + + I +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWDTAGQED 66
Query: 323 FGGLRDGYYIQGQCAIIMFDV 385
+ LR Y +I F V
Sbjct: 67 YDRLRPLSYPDSHVVLICFSV 87
Score = 27.9 bits (59), Expect = 1.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 418 WHRDLVRVCEGIPIVLCGNKVDIKD 492
W +++ C +PI+L G KVD+++
Sbjct: 100 WISEVLHFCSNLPILLVGCKVDLRN 124
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 46.4 bits (105), Expect = 3e-06
Identities = 29/83 (34%), Positives = 39/83 (46%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
K V+VGDG GKT + G F + YV T+ E + + + +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWDTAGQED 66
Query: 323 FGGLRDGYYIQGQCAIIMFDVTS 391
+ LR Y +I F V S
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDS 89
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 37.5 bits (83), Expect = 0.002
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
+ ++VG GKTT + + GE + T+G V + + I F VWD GQ+K
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYRN----ISFTVWDVGGQDK 73
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSR 394
L Y+ Q I + D R
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDR 97
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 35.5 bits (78), Expect = 0.006
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN-RGPIRFNVWDTAGQE 319
K +L+G G+GK++ ++ + + K LG + H G + N+WD GQE
Sbjct: 4 KVLLMGRSGSGKSS-MRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQE 62
Query: 320 KF-----GGLRDGYYIQGQCAIIMFDVTSR 394
F RD + Q I +FDV SR
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESR 92
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 33.9 bits (74), Expect = 0.019
Identities = 22/114 (19%), Positives = 56/114 (49%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
+ ++G GK++ +++ F + Y T+ + + + + DTAGQ++
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQ-EFATEIIDTAGQDE 66
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIEIWSVYVKVSLLSCAGTKWI 484
+ L + I ++++ +TS+ +++M ++I V+ +L+ GT+W+
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEM----VKI----VRDKILNHTGTEWV 112
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 32.7 bits (71), Expect = 0.043
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
+ +++G GKTT + + + + T+G V + + I+FNVWD GQ+K
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVETVTYKN----IKFNVWDVGGQDK 77
Query: 323 FGGLRDGYYIQGQCAIIMFD 382
L Y+ + I + D
Sbjct: 78 IRPLWRHYFTGTKGLIFVVD 97
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 31.1 bits (67), Expect = 0.13
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
+ +L+G GKTT +K L E + T G ++ L +RF +WD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKC-LLNEDVNEVSPTFGFQIRTLEVEG----LRFTIWDIGGQKT 72
Query: 323 FGGLRDGYYIQGQCAIIMFD 382
Y+ + I + D
Sbjct: 73 LRNFWKNYFESTEAIIWVVD 92
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 29.1 bits (62), Expect = 0.53
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 149 VLVGDGGTGKTTFVKR---HLTGEFEKKYVATLGVEVHPLVFHTN 274
++VG G+GKTTF+++ HL + + Y+ L V L + N
Sbjct: 12 IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 149 VLVGDGGTGKTTFVK 193
VL+G+ GTGKTTF K
Sbjct: 379 VLLGENGTGKTTFCK 393
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 388 GYVEHDDSTLSLNIVSVSKTTKLLLSGCVPHIKTNWPA-VRMEY*RMYFDTQS 233
G ++ D T + I+S + T + GC P+ KTNW +Y R+ D +S
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNWTCDFSYDYVRINADYRS 445
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 145 LECGHIICHFRCFIAILRDCIRKS 74
++C H CH +C+ ++ CI KS
Sbjct: 435 IDC-HYTCHKKCYPKVVTKCISKS 457
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 160 SYQYTLECGH--IICHFRCFIAILRDCIRKS 74
SY L+C + +CH +C +L CI +S
Sbjct: 435 SYSPGLQCENCSFVCHKKCVTKVLASCIAQS 465
>SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein
L9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLW 597
G VDIK R V K+NL++ DI K N K +W
Sbjct: 16 GVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNTIKFIVW 58
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 6.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 535 NLQYYDISAKSNYNFEKPFLWL 600
N+ Y +I++K NY+ + + WL
Sbjct: 244 NMPYIEITSKHNYDIDFKYKWL 265
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 6.6
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Frame = +2
Query: 149 VLVGDGGTGKTTFVKRHLTGEF-EKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKF 325
+LVG+ GTGKTT ++ L G +K V + + PI + E+F
Sbjct: 471 LLVGETGTGKTTTIQL-LAGLLGQKVTVINMSQQTESSDMLGGYKPINASTLGLPLHERF 529
Query: 326 GGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIEIWSVYVKVSLLSCAGTKWILKTEKLR 505
+ + + + A + ++ + T ++IW K+S G + + +K +
Sbjct: 530 IDIFEQTFSSKKNAKFISMASTSARRFRWKTCLKIWKEACKLSKTVLDGQQPLPNPQKRQ 589
Query: 506 RKLLFSTEKR 535
++L E R
Sbjct: 590 KRLSNQVELR 599
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 146 CVLVGDGGTGKTTFVK 193
C+LVGD TGKT ++
Sbjct: 1872 CILVGDTATGKTCILR 1887
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 25.4 bits (53), Expect = 6.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 415 NWHRDLVRVC-EGIPIVLCGNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPF 591
+WH + +V +G V G D+ ++ +K +KK L +I AK E+
Sbjct: 977 HWHVEAGKVTGKGKTAVDDGKFEDLSEKDLKKIEAKATKKKKLTRNEIKAKERRAREREL 1036
Query: 592 LWL 600
WL
Sbjct: 1037 AWL 1039
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 264 NTRGCTSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNTHLN 139
+T+ TSTP V S + C L +V PP+ TNT L+
Sbjct: 45 STKASTSTPFVENC----SNLLCDLASIVEDSPPTLTNTSLS 82
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 533 FFLWKTIVFALTFLSLISTLFPHKTIGIPS 444
F LW V+ ++ +SL ++ FPH + + S
Sbjct: 11 FNLWSHGVYKISSISLSNSFFPHSFMFVKS 40
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 290 NELARGSYG--ILEDVLRHPESQRIFSRTLQSN 198
NE+ +GS ILE +LR P Q F L+ N
Sbjct: 333 NEVEKGSTNKEILETILRKPNLQTYFFEFLKKN 365
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 25.0 bits (52), Expect = 8.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 299 WDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIEIWSVYVK 448
W+ G R YI +CA + TS TY + +TG E Y++
Sbjct: 280 WENEFYNWLGHERIHVYI-ARCAEDFQEFTSNKTYSIIITGYETVCTYLR 328
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 149 VLVGDGGTGKTTFVKRHLTGE 211
VL+G+ G+GKTT + ++L E
Sbjct: 530 VLLGETGSGKTTQITQYLAEE 550
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,706,008
Number of Sequences: 5004
Number of extensions: 59168
Number of successful extensions: 266
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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