Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14f22
         (497 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.3  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   2.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   4.1  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   7.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.4  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 54  HMPLHYQCDINADKNV 101
           H P  Y   +N+DKNV
Sbjct: 495 HKPFTYHIVVNSDKNV 510


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 54  HMPLHYQCDINADKNV 101
           H P  Y   +N+DKNV
Sbjct: 495 HKPFTYHIVVNSDKNV 510


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 54  HMPLHYQCDINADKNV 101
           H P  Y   +N+DKNV
Sbjct: 121 HKPFTYHIVVNSDKNV 136


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 95  FICVNVTLIM*RHMVFYIYFNTITT 21
           F C+ V  ++ R + +Y++   I T
Sbjct: 231 FTCLEVVFVLKRRLGYYLFHTYIPT 255


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 361 SRGDVICFSKLNWLY 317
           SRG VI F  L W Y
Sbjct: 158 SRGQVILFIVLIWTY 172


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 54  HMPLHYQCDINADK 95
           H P ++   INADK
Sbjct: 497 HKPFNFHITINADK 510


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 54  HMPLHYQCDINADK 95
           H P ++   INADK
Sbjct: 497 HKPFNFHITINADK 510


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,046
Number of Sequences: 438
Number of extensions: 1643
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)