Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14f21
(291 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 4.1
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 4.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 5.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 5.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 5.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 5.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 5.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 5.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 5.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 7.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 7.1
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 19 9.4
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 19 9.4
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 19 9.4
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 4.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 140 VLHPGKPTVSKTEIREK 190
+LHP + T K REK
Sbjct: 15 LLHPSRCTQGKVNYREK 31
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 4.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 140 VLHPGKPTVSKTEIREK 190
+LHP + T K REK
Sbjct: 15 LLHPSRCTQGKVNYREK 31
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 5.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 149 PGKPTVSKTEIREKL 193
PGKPT + E++ +
Sbjct: 137 PGKPTTTSDELKRDI 151
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 5.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 149 PGKPTVSKTEIREKL 193
PGKPT + E++ +
Sbjct: 137 PGKPTTTSDELKRDI 151
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 5.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 149 PGKPTVSKTEIREKL 193
PGKPT + E++ +
Sbjct: 137 PGKPTTTSDELKRDI 151
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 5.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 149 PGKPTVSKTEIREKL 193
PGKPT + E++ +
Sbjct: 137 PGKPTTTSDELKRDI 151
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 5.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 149 PGKPTVSKTEIREKL 193
PGKPT + E++ +
Sbjct: 137 PGKPTTTSDELKRDI 151
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.2 bits (40), Expect = 5.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 149 PGKPTVSKTEIREKL 193
PGKPT + E++ +
Sbjct: 137 PGKPTTTSDELKRDI 151
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 5.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 149 PGKPTVSKTEIREKL 193
PGKPT + E++ +
Sbjct: 137 PGKPTTTSDELKRDI 151
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 7.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2
Query: 149 PGKPTVSKTEIR 184
PGKPT + E++
Sbjct: 137 PGKPTTTSDELK 148
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.8 bits (39), Expect = 7.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 52 IXNE*RNSDYSHS 90
I +E NSDYSH+
Sbjct: 224 IKHESDNSDYSHT 236
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 19.4 bits (38), Expect = 9.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 63 LIXNYFQ*FGVYTHVSL 13
+I F FG+ THV L
Sbjct: 58 IIVGLFYEFGLITHVKL 74
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 105 LVMNLRVRIVAVPSLIXNYFQ*FGVYTHVSLLKQE 1
LVM+ +++I+ + I + + + +S+ KQE
Sbjct: 43 LVMDTKLKIIEILQFILDVRLDYRISCLLSIFKQE 77
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 105 LVMNLRVRIVAVPSLIXNYFQ*FGVYTHVSLLKQE 1
LVM+ +++I+ + I + + + +S+ KQE
Sbjct: 11 LVMDTKLKIIEILQFILDVRLDYRISCLLSIFKQE 45
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,590
Number of Sequences: 438
Number of extensions: 1324
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5869407
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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