Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14e15
(623 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.45
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.8
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 3.2
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.2
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 3.2
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 3.2
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 5.6
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 5.6
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 7.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.8
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.45
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 335 NTQNGISKLLAKTTIW 288
NT+NG+ LL++T IW
Sbjct: 229 NTKNGMKTLLSETDIW 244
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 490 YLHVYHHMGHHALSQSHHRRYGVYARQKQ 576
+L +HH Q HHR Y +Q+Q
Sbjct: 143 HLQNHHHHLQSTAVQDHHRPYQQQQQQQQ 171
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.6 bits (46), Expect = 3.2
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 207 KSGVSGIMATSKTIVLYLCQAPATASLYVSAD----TDADEPIIYFENITECL 61
+ G+SG+ + T LY +T+ YV+ + +D + I++E + L
Sbjct: 250 QDGISGMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 480 PRVLLTRLPPYGTP 521
PR+L+ R PY TP
Sbjct: 359 PRLLMMRRTPYSTP 372
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 3.2
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 207 KSGVSGIMATSKTIVLYLCQAPATASLYVSAD----TDADEPIIYFENITECL 61
+ G+SG+ + T LY +T+ YV+ + +D + I++E + L
Sbjct: 250 QDGISGMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 3.2
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 207 KSGVSGIMATSKTIVLYLCQAPATASLYVSAD----TDADEPIIYFENITECL 61
+ G+SG+ + T LY +T+ YV+ + +D + I++E + L
Sbjct: 250 QDGISGMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +2
Query: 302 SQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPD 409
S T + C K +IQK + +L EW P+
Sbjct: 65 SHITEAFQTQC-KKCTEIQKQNLDKLAEWFTTNEPE 99
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +2
Query: 302 SQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPD 409
S T + C K +IQK + +L EW P+
Sbjct: 65 SHITEAFQTQC-KKCTEIQKQNLDKLAEWFTTNEPE 99
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 490 YLHVYHHMGHHALSQSHHRRYG 555
Y VYH HH +HH G
Sbjct: 270 YGGVYHLDNHHVHHANHHAILG 291
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 210 EKSGVSGIMATSKTIVLYLCQAPATA 133
EK+GVS + + L+ +PATA
Sbjct: 1237 EKTGVSTLRGQERQRSLFKDSSPATA 1262
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 34 SKLVALVVRKTFCNIFEIN 90
++ VA V +T+CN+F ++
Sbjct: 529 ARRVASVRAETYCNLFSLS 547
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 34 SKLVALVVRKTFCNIFEIN 90
++ VA V +T+CN+F ++
Sbjct: 497 ARRVASVRAETYCNLFSLS 515
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,223
Number of Sequences: 438
Number of extensions: 3531
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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