Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14d22
         (481 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein.    41   0.003
BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein.            41   0.003
BC028744-1|AAH28744.1|  522|Homo sapiens plexin A4, B protein.         41   0.003
AK123428-1|BAC85615.1|  492|Homo sapiens protein ( Homo sapiens ...    41   0.003
AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor ...    41   0.003
AJ011414-1|CAB56221.1|  729|Homo sapiens plexin-B1/SEP receptor ...    41   0.003
AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein.             41   0.003
BX649592-5|CAO03499.1|  162|Homo sapiens plexin B2 protein.            39   0.010
BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.            39   0.010
BC127770-1|AAI27771.1|  522|Homo sapiens PLXNB2 protein protein.       39   0.010
AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.             39   0.010
X87852-1|CAA61132.1| 1871|Homo sapiens SEX protein protein.            37   0.032
BX936365-2|CAI43194.1| 1871|Homo sapiens plexin A3 protein.            37   0.032
BC132676-1|AAI32677.1| 1909|Homo sapiens PLXNA2 protein protein.       34   0.22 
AY358496-1|AAQ88860.1|  552|Homo sapiens PLXNA2 protein.               34   0.22 
AL590138-1|CAI39808.1| 1894|Homo sapiens plexin A2 protein.            34   0.22 
AL356275-5|CAI40198.1| 1894|Homo sapiens plexin A2 protein.            34   0.22 
AF149019-1|AAG01376.1| 1909|Homo sapiens plexin-B3 protein.            34   0.22 
AB033032-1|BAA86520.1| 1912|Homo sapiens KIAA1206 protein protein.     34   0.22 
AB007932-1|BAA32308.1| 1963|Homo sapiens KIAA0463 protein protein.     34   0.22 
BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein.            33   0.39 
X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein pro...    32   0.91 
X70040-1|CAA49634.1| 1400|Homo sapiens tyrosine kinase protein.        30   4.8  

>X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein.
          Length = 2135

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 22/43 (51%), Positives = 26/43 (60%)
 Frame = +3

Query: 261 NETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           N TY   HLA D  SG +Y G+ N+L QLSP L+    V TGP
Sbjct: 31  NGTY-LQHLARDPTSGTLYLGATNFLFQLSPGLQLEATVSTGP 72


>BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein.
          Length = 2135

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 22/43 (51%), Positives = 26/43 (60%)
 Frame = +3

Query: 261 NETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           N TY   HLA D  SG +Y G+ N+L QLSP L+    V TGP
Sbjct: 31  NGTY-LQHLARDPTSGTLYLGATNFLFQLSPGLQLEATVSTGP 72


>BC028744-1|AAH28744.1|  522|Homo sapiens plexin A4, B protein.
          Length = 522

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/38 (44%), Positives = 27/38 (71%)
 Frame = +3

Query: 276 FYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           F HL VD+ +G +Y G++N +++LS DLK +   +TGP
Sbjct: 51  FNHLVVDERTGHIYLGAVNRIYKLSSDLKVLVTHETGP 88


>AK123428-1|BAC85615.1|  492|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41434 fis, clone BRHIP2007616, moderately
           similar to Plexin 2. ).
          Length = 492

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/38 (44%), Positives = 27/38 (71%)
 Frame = +3

Query: 276 FYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           F HL VD+ +G +Y G++N +++LS DLK +   +TGP
Sbjct: 51  FNHLVVDERTGHIYLGAVNRIYKLSSDLKVLVTHETGP 88


>AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor
           protein.
          Length = 1952

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 22/43 (51%), Positives = 26/43 (60%)
 Frame = +3

Query: 261 NETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           N TY   HLA D  SG +Y G+ N+L QLSP L+    V TGP
Sbjct: 31  NGTY-LQHLARDPTSGTLYLGATNFLFQLSPGLQLEATVSTGP 72


>AJ011414-1|CAB56221.1|  729|Homo sapiens plexin-B1/SEP receptor
           protein.
          Length = 729

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 22/43 (51%), Positives = 26/43 (60%)
 Frame = +3

Query: 261 NETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           N TY   HLA D  SG +Y G+ N+L QLSP L+    V TGP
Sbjct: 31  NGTY-LQHLARDPTSGTLYLGATNFLFQLSPGLQLEATVSTGP 72


>AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein.
          Length = 2143

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 22/43 (51%), Positives = 26/43 (60%)
 Frame = +3

Query: 261 NETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           N TY   HLA D  SG +Y G+ N+L QLSP L+    V TGP
Sbjct: 39  NGTY-LQHLARDPTSGTLYLGATNFLFQLSPGLQLEATVSTGP 80


>BX649592-5|CAO03499.1|  162|Homo sapiens plexin B2 protein.
          Length = 162

 Score = 38.7 bits (86), Expect = 0.010
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           HLAVD+ SG VY G++N L+QL   L+    V TGP
Sbjct: 36  HLAVDEASGVVYLGAVNALYQLDAKLQLEQQVATGP 71


>BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.
          Length = 1838

 Score = 38.7 bits (86), Expect = 0.010
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           HLAVD+ SG VY G++N L+QL   L+    V TGP
Sbjct: 36  HLAVDEASGVVYLGAVNALYQLDAKLQLEQQVATGP 71


>BC127770-1|AAI27771.1|  522|Homo sapiens PLXNB2 protein protein.
          Length = 522

 Score = 38.7 bits (86), Expect = 0.010
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           HLAVD+ SG VY G++N L+QL   L+    V TGP
Sbjct: 36  HLAVDEASGVVYLGAVNALYQLDAKLQLEQQVATGP 71


>AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.
          Length = 1841

 Score = 38.7 bits (86), Expect = 0.010
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           HLAVD+ SG VY G++N L+QL   L+    V TGP
Sbjct: 39  HLAVDEASGVVYLGAVNALYQLDAKLQLEQQVATGP 74


>X87852-1|CAA61132.1| 1871|Homo sapiens SEX protein protein.
          Length = 1871

 Score = 37.1 bits (82), Expect = 0.032
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           HLAV +++G+V+ G++N + +L+P+L  +    TGP
Sbjct: 35  HLAVHRVTGEVFVGAVNRVFKLAPNLTELRAHVTGP 70


>BX936365-2|CAI43194.1| 1871|Homo sapiens plexin A3 protein.
          Length = 1871

 Score = 37.1 bits (82), Expect = 0.032
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           HLAV +++G+V+ G++N + +L+P+L  +    TGP
Sbjct: 35  HLAVHRVTGEVFVGAVNRVFKLAPNLTELRAHVTGP 70


>BC132676-1|AAI32677.1| 1909|Homo sapiens PLXNA2 protein protein.
          Length = 1909

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 258 KNETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGPK 392
           +N  + F HL V + +G VY G++N +++L+ +L      KTGP+
Sbjct: 59  ENRDWTFNHLTVHQGTGAVYVGAINRVYKLTGNLTIQVAHKTGPE 103


>AY358496-1|AAQ88860.1|  552|Homo sapiens PLXNA2 protein.
          Length = 552

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 258 KNETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGPK 392
           +N  + F HL V + +G VY G++N +++L+ +L      KTGP+
Sbjct: 98  ENRDWTFNHLTVHQGTGAVYVGAINRVYKLTGNLTIQVAHKTGPE 142


>AL590138-1|CAI39808.1| 1894|Homo sapiens plexin A2 protein.
          Length = 1894

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 258 KNETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGPK 392
           +N  + F HL V + +G VY G++N +++L+ +L      KTGP+
Sbjct: 44  ENRDWTFNHLTVHQGTGAVYVGAINRVYKLTGNLTIQVAHKTGPE 88


>AL356275-5|CAI40198.1| 1894|Homo sapiens plexin A2 protein.
          Length = 1894

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 258 KNETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGPK 392
           +N  + F HL V + +G VY G++N +++L+ +L      KTGP+
Sbjct: 44  ENRDWTFNHLTVHQGTGAVYVGAINRVYKLTGNLTIQVAHKTGPE 88


>AF149019-1|AAG01376.1| 1909|Homo sapiens plexin-B3 protein.
          Length = 1909

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           HLA+    G +Y G++N L QLSP+L+   V  TGP
Sbjct: 56  HLALAPGRGTLYVGAVNRLFQLSPELQLEAVAVTGP 91


>AB033032-1|BAA86520.1| 1912|Homo sapiens KIAA1206 protein protein.
          Length = 1912

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           HLA+    G +Y G++N L QLSP+L+   V  TGP
Sbjct: 59  HLALAPGRGTLYVGAVNRLFQLSPELQLEAVAVTGP 94


>AB007932-1|BAA32308.1| 1963|Homo sapiens KIAA0463 protein protein.
          Length = 1963

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 258 KNETYQFYHLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGPK 392
           +N  + F HL V + +G VY G++N +++L+ +L      KTGP+
Sbjct: 113 ENRDWTFNHLTVHQGTGAVYVGAINRVYKLTGNLTIQVAHKTGPE 157


>BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein.
          Length = 1266

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLK 362
           HLAVD+ SG VY G++N L+QL   L+
Sbjct: 36  HLAVDEASGVVYLGAVNALYQLDAKLQ 62


>X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein
           protein.
          Length = 1754

 Score = 32.3 bits (70), Expect = 0.91
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 282 HLAVDKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           HL V + +G+VY G++N +++LS +L  +    TGP
Sbjct: 31  HLLVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGP 66


>X70040-1|CAA49634.1| 1400|Homo sapiens tyrosine kinase protein.
          Length = 1400

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 294 DKISGQVYAGSLNWLHQLSPDLKPIHVVKTGP 389
           D+    V+    N LH L PDLK +  + TGP
Sbjct: 64  DRNESAVFVAIRNRLHVLGPDLKSVQSLATGP 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,908,804
Number of Sequences: 237096
Number of extensions: 1312779
Number of successful extensions: 2143
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)