Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14d19
         (582 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51134-1|AAD05036.1|  148|Homo sapiens calcitonin gene-related p...    72   1e-12
BC105808-1|AAI05809.1|  148|Homo sapiens calcitonin gene-related...    72   1e-12
AF073792-1|AAC25992.1|  148|Homo sapiens CGRP-receptor component...    72   1e-12
BC040107-1|AAH40107.1|  115|Homo sapiens calcitonin gene-related...    44   3e-04

>U51134-1|AAD05036.1|  148|Homo sapiens calcitonin gene-related
           peptide receptor component protein protein.
          Length = 148

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
 Frame = +1

Query: 352 METIKANSAFLCNYEVMQILQKLKDNTHKKHKREAS-----LATVTYETVHYLQDTECKN 516
           ME   ANSA L NYEV Q+L  LK+   +  K + S     L T+TYET+ Y+  T C++
Sbjct: 1   MEVKDANSALLSNYEVFQLLTDLKEQRKESGKNKHSSGQQNLNTITYETLKYISKTPCRH 60

Query: 517 QSAQKIQKFLEAMKKYKLTKVE 582
           QS + +++FL A+K +KLTK E
Sbjct: 61  QSPEIVREFLTALKSHKLTKAE 82


>BC105808-1|AAI05809.1|  148|Homo sapiens calcitonin gene-related
           peptide-receptor component protein protein.
          Length = 148

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
 Frame = +1

Query: 352 METIKANSAFLCNYEVMQILQKLKDNTHKKHKREAS-----LATVTYETVHYLQDTECKN 516
           ME   ANSA L NYEV Q+L  LK+   +  K + S     L T+TYET+ Y+  T C++
Sbjct: 1   MEVKDANSALLSNYEVFQLLTDLKEQRKESGKNKHSSGQQNLNTITYETLKYISKTPCRH 60

Query: 517 QSAQKIQKFLEAMKKYKLTKVE 582
           QS + +++FL A+K +KLTK E
Sbjct: 61  QSPEIVREFLTALKSHKLTKAE 82


>AF073792-1|AAC25992.1|  148|Homo sapiens CGRP-receptor component
           protein protein.
          Length = 148

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
 Frame = +1

Query: 352 METIKANSAFLCNYEVMQILQKLKDNTHKKHKREAS-----LATVTYETVHYLQDTECKN 516
           ME   ANSA L NYEV Q+L  LK+   +  K + S     L T+TYET+ Y+  T C++
Sbjct: 1   MEVKDANSALLSNYEVFQLLTDLKEQRKESGKNKHSSGQQNLNTITYETLKYISKTPCRH 60

Query: 517 QSAQKIQKFLEAMKKYKLTKVE 582
           QS + +++FL A+K +KLTK E
Sbjct: 61  QSPEIVREFLTALKSHKLTKAE 82


>BC040107-1|AAH40107.1|  115|Homo sapiens calcitonin gene-related
           peptide-receptor component protein protein.
          Length = 115

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 19/46 (41%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = +1

Query: 448 REASLATVT-YETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVE 582
           ++A+ A ++ YET+ Y+  T C++QS + +++FL A+K +KLTK E
Sbjct: 4   KDANSALLSNYETLKYISKTPCRHQSPEIVREFLTALKSHKLTKAE 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,998,277
Number of Sequences: 237096
Number of extensions: 1484308
Number of successful extensions: 2434
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2431
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)