Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14d16
(522 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 103 5e-22
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 102 7e-22
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 102 7e-22
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 102 7e-22
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 102 7e-22
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 102 7e-22
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 102 7e-22
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 102 7e-22
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 102 7e-22
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 102 7e-22
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 93 4e-19
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 93 5e-19
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 93 7e-19
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 103 bits (246), Expect = 5e-22
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L GV R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 102 bits (245), Expect = 7e-22
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 102 bits (245), Expect = 7e-22
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 102 bits (245), Expect = 7e-22
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 102 bits (245), Expect = 7e-22
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 102 bits (245), Expect = 7e-22
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 102 bits (245), Expect = 7e-22
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 102 bits (245), Expect = 7e-22
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 102 bits (245), Expect = 7e-22
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 102 bits (245), Expect = 7e-22
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 495
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 496 GILPSGLLL 522
L SGLLL
Sbjct: 166 KQLASGLLL 174
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 93.5 bits (222), Expect = 4e-19
Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +1
Query: 187 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 366
+S+ M+ K KY L V K +GG+KNGGTR V L++ +YPT++
Sbjct: 2 YSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 367 KIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLL 522
R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L SGLLL
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 113
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 93.1 bits (221), Expect = 5e-19
Identities = 54/130 (41%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Frame = +1
Query: 154 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 321
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 322 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKR-VVL 492
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GR GK VV
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGKNWVVF 165
Query: 493 VGILPSGLLL 522
+ L SGLLL
Sbjct: 166 LKQLASGLLL 175
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 92.7 bits (220), Expect = 7e-19
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Frame = +1
Query: 178 VMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYP 357
+ S+ M+ K KY L V K +GG+KNGGTR V L++ +YP
Sbjct: 60 ICHVSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 358 TQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLL 522
T++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L SGLLL
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,159,452
Number of Sequences: 237096
Number of extensions: 1574165
Number of successful extensions: 3343
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3330
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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