Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14d06
(324 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012764-1|AAH12764.1| 743|Homo sapiens RALBP1 associated Eps d... 29 4.3
AL121834-13|CAI42879.1| 743|Homo sapiens RALBP1 associated Eps ... 29 4.3
AL121834-11|CAI42877.1| 744|Homo sapiens RALBP1 associated Eps ... 29 4.3
AL121834-8|CAI42874.1| 146|Homo sapiens RALBP1 associated Eps d... 29 4.3
AF251052-1|AAK34942.1| 744|Homo sapiens RALBP1 protein. 29 4.3
BC130633-1|AAI30634.1| 725|Homo sapiens USP54 protein protein. 28 7.4
BC064967-1|AAH64967.1| 654|Homo sapiens USP54 protein protein. 28 7.4
AL359074-7|CAO03506.1| 1684|Homo sapiens ubiquitin specific pept... 28 7.4
AK127267-1|BAC86907.1| 767|Homo sapiens protein ( Homo sapiens ... 28 7.4
AK127213-1|BAC86886.1| 725|Homo sapiens protein ( Homo sapiens ... 28 7.4
AK127081-1|BAC86817.1| 716|Homo sapiens protein ( Homo sapiens ... 28 7.4
AK126497-1|BAC86566.1| 772|Homo sapiens protein ( Homo sapiens ... 28 7.4
>BC012764-1|AAH12764.1| 743|Homo sapiens RALBP1 associated Eps
domain containing 1 protein.
Length = 743
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -2
Query: 209 LAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKTVCRGSNPAANPNSPQYVDISDL 36
L Q D NI DP A P+ M + E + R + NP SP V SDL
Sbjct: 382 LTQFDSNIAPADPDTAIVHPVPIRMTPSKIHMQEMELKRTGSDHTNPTSPLLVKPSDL 439
>AL121834-13|CAI42879.1| 743|Homo sapiens RALBP1 associated Eps
domain containing 1 protein.
Length = 743
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -2
Query: 209 LAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKTVCRGSNPAANPNSPQYVDISDL 36
L Q D NI DP A P+ M + E + R + NP SP V SDL
Sbjct: 382 LTQFDSNIAPADPDTAIVHPVPIRMTPSKIHMQEMELKRTGSDHTNPTSPLLVKPSDL 439
>AL121834-11|CAI42877.1| 744|Homo sapiens RALBP1 associated Eps
domain containing 1 protein.
Length = 744
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -2
Query: 209 LAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKTVCRGSNPAANPNSPQYVDISDL 36
L Q D NI DP A P+ M + E + R + NP SP V SDL
Sbjct: 382 LTQFDSNIAPADPDTAIVHPVPIRMTPSKIHMQEMELKRTGSDHTNPTSPLLVKPSDL 439
>AL121834-8|CAI42874.1| 146|Homo sapiens RALBP1 associated Eps
domain containing 1 protein.
Length = 146
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -2
Query: 209 LAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKTVCRGSNPAANPNSPQYVDISDL 36
L Q D NI DP A P+ M + E + R + NP SP V SDL
Sbjct: 21 LTQFDSNIAPADPDTAIVHPVPIRMTPSKIHMQEMELKRTGSDHTNPTSPLLVKPSDL 78
>AF251052-1|AAK34942.1| 744|Homo sapiens RALBP1 protein.
Length = 744
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -2
Query: 209 LAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKTVCRGSNPAANPNSPQYVDISDL 36
L Q D NI DP A P+ M + E + R + NP SP V SDL
Sbjct: 382 LTQFDSNIAPADPDTAIVHPVPIRMTPSKIHMQEMELKRTGSDHTNPTSPLLVKPSDL 439
>BC130633-1|AAI30634.1| 725|Homo sapiens USP54 protein protein.
Length = 725
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = -2
Query: 281 QGRNAGENVESCLLLQRTCRQDXNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
>BC064967-1|AAH64967.1| 654|Homo sapiens USP54 protein protein.
Length = 654
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = -2
Query: 281 QGRNAGENVESCLLLQRTCRQDXNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ +AQ + +DP AN SP++ + +
Sbjct: 13 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 70
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 71 GCSPSNSSAQPSLPLY 86
>AL359074-7|CAO03506.1| 1684|Homo sapiens ubiquitin specific peptidase
54 protein.
Length = 1684
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = -2
Query: 281 QGRNAGENVESCLLLQRTCRQDXNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ +AQ + +DP AN SP++ + +
Sbjct: 996 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 1053
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 1054 GCSPSNSSAQPSLPLY 1069
>AK127267-1|BAC86907.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ45334 fis, clone BRHIP3007409. ).
Length = 767
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = -2
Query: 281 QGRNAGENVESCLLLQRTCRQDXNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
>AK127213-1|BAC86886.1| 725|Homo sapiens protein ( Homo sapiens
cDNA FLJ45280 fis, clone BRHIP3001360. ).
Length = 725
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = -2
Query: 281 QGRNAGENVESCLLLQRTCRQDXNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
>AK127081-1|BAC86817.1| 716|Homo sapiens protein ( Homo sapiens
cDNA FLJ45138 fis, clone BRAWH3039258. ).
Length = 716
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = -2
Query: 281 QGRNAGENVESCLLLQRTCRQDXNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
>AK126497-1|BAC86566.1| 772|Homo sapiens protein ( Homo sapiens
cDNA FLJ44533 fis, clone UTERU3004523. ).
Length = 772
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = -2
Query: 281 QGRNAGENVESCLLLQRTCRQDXNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,126,063
Number of Sequences: 237096
Number of extensions: 795348
Number of successful extensions: 5751
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5751
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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