Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14c10
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   1.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   3.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   6.7  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 30  VFLILKFTRYQFVGYYYLFFVC 95
           +FL+++F  +  + +  LFF C
Sbjct: 135 IFLLIRFKSFSLLNFNLLFFNC 156


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 126 NEMSSSAMEKHLFNLKFAVKELERNS 203
           N M+   M++ + NLK     +ERNS
Sbjct: 534 NYMNFMQMDEFVVNLKSGSNTIERNS 559


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 126 NEMSSSAMEKHLFNLKFAVKELERNS 203
           N M+   M++ + NLK     +ERNS
Sbjct: 534 NYMNFMQMDEFVVNLKSGSNTIERNS 559


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 126 NEMSSSAMEKHLFNLKFAVKELERNS 203
           N M+   M++ + NLK     +ERNS
Sbjct: 160 NYMNFMQMDEFVVNLKSGSNTIERNS 185


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 410 NGRCSKSNGCSNEINELR 463
           N RC+KSN  +N  N+ +
Sbjct: 414 NTRCAKSNNQNNNQNKYK 431


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,318
Number of Sequences: 438
Number of extensions: 2115
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)