Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14b24
         (557 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456604-1|CAG30490.1|  605|Homo sapiens Em:U62317.2 protein.          29   8.4  
BC014939-1|AAH14939.2|  532|Homo sapiens NCAPH2 protein protein.       29   8.4  
BC009441-1|AAH09441.1|  556|Homo sapiens non-SMC condensin II co...    29   8.4  
BC001937-1|AAH01937.1|  555|Homo sapiens non-SMC condensin II co...    29   8.4  
BC001833-1|AAH01833.1|  249|Homo sapiens non-SMC condensin II co...    29   8.4  
BC001509-1|AAH01509.1|  249|Homo sapiens non-SMC condensin II co...    29   8.4  
BC001298-1|AAH01298.1|  539|Homo sapiens NCAPH2 protein protein.       29   8.4  
BC000473-1|AAH00473.1|  249|Homo sapiens non-SMC condensin II co...    29   8.4  

>CR456604-1|CAG30490.1|  605|Homo sapiens Em:U62317.2 protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 232 NVDKKYKTTYSESGSIPYTP----APDNVVKQGDPLYLQPHTVLITKE 363
           NVD K   T SE   IP  P    APD + K  +PLY +   VL +++
Sbjct: 130 NVDLKNDQTPSEVLIIPLLPMALVAPDEMEKNNNPLYSRQGEVLASRK 177


>BC014939-1|AAH14939.2|  532|Homo sapiens NCAPH2 protein protein.
          Length = 532

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 232 NVDKKYKTTYSESGSIPYTP----APDNVVKQGDPLYLQPHTVLITKE 363
           NVD K   T SE   IP  P    APD + K  +PLY +   VL +++
Sbjct: 57  NVDLKNDQTPSEVLIIPLLPMALVAPDEMEKNNNPLYSRQGEVLASRK 104


>BC009441-1|AAH09441.1|  556|Homo sapiens non-SMC condensin II
           complex, subunit H2 protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 232 NVDKKYKTTYSESGSIPYTP----APDNVVKQGDPLYLQPHTVLITKE 363
           NVD K   T SE   IP  P    APD + K  +PLY +   VL +++
Sbjct: 80  NVDLKNDQTPSEVLIIPLLPMALVAPDEMEKNNNPLYSRQGEVLASRK 127


>BC001937-1|AAH01937.1|  555|Homo sapiens non-SMC condensin II
           complex, subunit H2 protein.
          Length = 555

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 232 NVDKKYKTTYSESGSIPYTP----APDNVVKQGDPLYLQPHTVLITKE 363
           NVD K   T SE   IP  P    APD + K  +PLY +   VL +++
Sbjct: 80  NVDLKNDQTPSEVLIIPLLPMALVAPDEMEKNNNPLYSRQGEVLASRK 127


>BC001833-1|AAH01833.1|  249|Homo sapiens non-SMC condensin II
           complex, subunit H2 protein.
          Length = 249

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 232 NVDKKYKTTYSESGSIPYTP----APDNVVKQGDPLYLQPHTVLITKE 363
           NVD K   T SE   IP  P    APD + K  +PLY +   VL +++
Sbjct: 80  NVDLKNDQTPSEVLIIPLLPMALVAPDEMEKNNNPLYSRQGEVLASRK 127


>BC001509-1|AAH01509.1|  249|Homo sapiens non-SMC condensin II
           complex, subunit H2 protein.
          Length = 249

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 232 NVDKKYKTTYSESGSIPYTP----APDNVVKQGDPLYLQPHTVLITKE 363
           NVD K   T SE   IP  P    APD + K  +PLY +   VL +++
Sbjct: 80  NVDLKNDQTPSEVLIIPLLPMALVAPDEMEKNNNPLYSRQGEVLASRK 127


>BC001298-1|AAH01298.1|  539|Homo sapiens NCAPH2 protein protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 232 NVDKKYKTTYSESGSIPYTP----APDNVVKQGDPLYLQPHTVLITKE 363
           NVD K   T SE   IP  P    APD + K  +PLY +   VL +++
Sbjct: 80  NVDLKNDQTPSEVLIIPLLPMALVAPDEMEKNNNPLYSRQGEVLASRK 127


>BC000473-1|AAH00473.1|  249|Homo sapiens non-SMC condensin II
           complex, subunit H2 protein.
          Length = 249

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 232 NVDKKYKTTYSESGSIPYTP----APDNVVKQGDPLYLQPHTVLITKE 363
           NVD K   T SE   IP  P    APD + K  +PLY +   VL +++
Sbjct: 80  NVDLKNDQTPSEVLIIPLLPMALVAPDEMEKNNNPLYSRQGEVLASRK 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,049,973
Number of Sequences: 237096
Number of extensions: 1451110
Number of successful extensions: 3042
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3042
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)